RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 CXCR3P49682 368 aa17.17■□□□□ 0.34
CXCL1-201ENST00000395761 RPL7AP62424 266 aaKnown RBP17.17■□□□□ 0.34
CXCL1-201ENST00000395761 ATP11AP98196 1134 aa17.17■□□□□ 0.34
CXCL1-201ENST00000395761 DEUP1Q05D60 604 aa17.17■□□□□ 0.34
CXCL1-201ENST00000395761 MTAPQ13126 283 aa17.17■□□□□ 0.34
CXCL1-201ENST00000395761 LRRC32Q14392 662 aa17.17■□□□□ 0.34
CXCL1-201ENST00000395761 C15orf59Q2T9L4 293 aaPredicted RBP17.17■□□□□ 0.34
CXCL1-201ENST00000395761 MPPE1Q53F39 396 aa17.17■□□□□ 0.34
CXCL1-201ENST00000395761 PPP1R15BQ5SWA1 713 aa17.17■□□□□ 0.34
CXCL1-201ENST00000395761 PIK3R6Q5UE93 754 aa17.17■□□□□ 0.34
CXCL1-201ENST00000395761 PPP1R2P3Q6NXS1 205 aa17.17■□□□□ 0.34
CXCL1-201ENST00000395761 TMA16Q96EY4 203 aaKnown RBP17.17■□□□□ 0.34
CXCL1-201ENST00000395761 PGAP3Q96FM1 320 aaPredicted RBP17.17■□□□□ 0.34
CXCL1-201ENST00000395761 BTN2A3PQ96KV6 586 aa17.17■□□□□ 0.34
CXCL1-201ENST00000395761 XPO6Q96QU8 1125 aaKnown RBP17.17■□□□□ 0.34
CXCL1-201ENST00000395761 ISCUQ9H1K1 167 aa17.17■□□□□ 0.34
CXCL1-201ENST00000395761 CHRDQ9H2X0 955 aa17.17■□□□□ 0.34
CXCL1-201ENST00000395761 ARHGEF4Q9NR80 690 aa17.17■□□□□ 0.34
CXCL1-201ENST00000395761 DNAJC17Q9NVM6 304 aaKnown RBP17.17■□□□□ 0.34
CXCL1-201ENST00000395761 FBXO10Q9UK96 956 aa17.17■□□□□ 0.34
CXCL1-201ENST00000395761 A0A0A0MRY4 1105 aa17.16■□□□□ 0.34
CXCL1-201ENST00000395761 CYBBP04839 570 aa17.16■□□□□ 0.34
CXCL1-201ENST00000395761 SLC2A3P11169 496 aa17.16■□□□□ 0.34
CXCL1-201ENST00000395761 ABCB4P21439 1286 aa17.16■□□□□ 0.34
CXCL1-201ENST00000395761 FECHP22830 423 aa17.16■□□□□ 0.34
CXCL1-201ENST00000395761 SDC4P31431 198 aa17.16■□□□□ 0.34
CXCL1-201ENST00000395761 GRIA2P42262 883 aa17.16■□□□□ 0.34
CXCL1-201ENST00000395761 MAMLD1Q13495 774 aa17.16■□□□□ 0.34
CXCL1-201ENST00000395761 PPP2R5DQ14738 602 aa17.16■□□□□ 0.34
CXCL1-201ENST00000395761 TSR1Q2NL82 804 aaKnown RBP17.16■□□□□ 0.34
CXCL1-201ENST00000395761 MS4A13Q5J8X5 152 aa17.16■□□□□ 0.34
CXCL1-201ENST00000395761 RAP1GAP2Q684P5 730 aa17.16■□□□□ 0.34
CXCL1-201ENST00000395761 GRAMD4Q6IC98 578 aa17.16■□□□□ 0.34
CXCL1-201ENST00000395761 PLEKHA7Q6IQ23 1121 aa17.16■□□□□ 0.34
CXCL1-201ENST00000395761 PKN3Q6P5Z2 889 aa17.16■□□□□ 0.34
CXCL1-201ENST00000395761 VPS36Q86VN1 386 aa17.16■□□□□ 0.34
CXCL1-201ENST00000395761 ATP6V0D2Q8N8Y2 350 aa17.16■□□□□ 0.34
CXCL1-201ENST00000395761 EXOC4Q96A65 974 aa17.16■□□□□ 0.34
CXCL1-201ENST00000395761 PRICKLE1Q96MT3 831 aaPredicted RBP17.16■□□□□ 0.34
CXCL1-201ENST00000395761 MCEEQ96PE7 176 aa17.16■□□□□ 0.34
CXCL1-201ENST00000395761 CHP1Q99653 195 aa17.16■□□□□ 0.34
CXCL1-201ENST00000395761 TMPRSS4Q9NRS4 437 aa17.16■□□□□ 0.34
CXCL1-201ENST00000395761 SPATA6Q9NWH7 488 aaPredicted RBP17.16■□□□□ 0.34
CXCL1-201ENST00000395761 C2orf42Q9NWW7 574 aa17.16■□□□□ 0.34
CXCL1-201ENST00000395761 ARHGEF38Q9NXL2 777 aa17.16■□□□□ 0.34
CXCL1-201ENST00000395761 MIA3Q5JRA6 1907 aa17.15■□□□□ 0.34
CXCL1-201ENST00000395761 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.15■□□□□ 0.34
CXCL1-201ENST00000395761 GALR2O43603 387 aaPredicted RBP17.15■□□□□ 0.34
CXCL1-201ENST00000395761 RNF40O75150 1001 aa17.15■□□□□ 0.34
CXCL1-201ENST00000395761 PAGE1O75459 146 aa17.15■□□□□ 0.34
CXCL1-201ENST00000395761 ENDOD1O94919 500 aa17.15■□□□□ 0.34
CXCL1-201ENST00000395761 F9P00740 461 aa17.15■□□□□ 0.34
CXCL1-201ENST00000395761 APODP05090 189 aa17.15■□□□□ 0.34
CXCL1-201ENST00000395761 TACR2P21452 398 aa17.15■□□□□ 0.34
CXCL1-201ENST00000395761 GPD1P21695 349 aa17.15■□□□□ 0.34
CXCL1-201ENST00000395761 HOXD9P28356 352 aaPredicted RBP17.15■□□□□ 0.34
CXCL1-201ENST00000395761 MAGEA9P43362 315 aa17.15■□□□□ 0.34
CXCL1-201ENST00000395761 PTPN9P43378 593 aa17.15■□□□□ 0.34
CXCL1-201ENST00000395761 SEC13P55735 322 aa17.15■□□□□ 0.34
CXCL1-201ENST00000395761 RPS24P62847 133 aaKnown RBP17.15■□□□□ 0.34
CXCL1-201ENST00000395761 OGDHQ02218 1023 aa17.15■□□□□ 0.34
CXCL1-201ENST00000395761 GFPT1Q06210 699 aaPredicted RBP17.15■□□□□ 0.34
CXCL1-201ENST00000395761 CDO1Q16878 200 aa17.15■□□□□ 0.34
CXCL1-201ENST00000395761 ASTE1Q2TB18 679 aaPredicted RBP17.15■□□□□ 0.34
CXCL1-201ENST00000395761 EMC10Q5UCC4 262 aa17.15■□□□□ 0.34
CXCL1-201ENST00000395761 C1orf210Q8IVY1 113 aa17.15■□□□□ 0.34
CXCL1-201ENST00000395761 LGI2Q8N0V4 545 aa17.15■□□□□ 0.34
CXCL1-201ENST00000395761 CFAP52Q8N1V2 620 aa17.15■□□□□ 0.34
CXCL1-201ENST00000395761 SYNPOQ8N3V7 929 aa17.15■□□□□ 0.34
CXCL1-201ENST00000395761 PRSS33Q8NF86 280 aa17.15■□□□□ 0.34
CXCL1-201ENST00000395761 CENPIQ92674 756 aaPredicted RBP17.15■□□□□ 0.34
CXCL1-201ENST00000395761 ZNF653Q96CK0 615 aa17.15■□□□□ 0.34
CXCL1-201ENST00000395761 PRMT1Q99873 361 aaKnown RBP17.15■□□□□ 0.34
CXCL1-201ENST00000395761 DDX50Q9BQ39 737 aaKnown RBP17.15■□□□□ 0.34
CXCL1-201ENST00000395761 TKTL2Q9H0I9 626 aa17.15■□□□□ 0.34
CXCL1-201ENST00000395761 WDCPQ9H6R7 721 aa17.15■□□□□ 0.34
CXCL1-201ENST00000395761 POLR3BQ9NW08 1133 aaPredicted RBP17.15■□□□□ 0.34
CXCL1-201ENST00000395761 ZNHIT6Q9NWK9 470 aaKnown RBP17.15■□□□□ 0.34
CXCL1-201ENST00000395761 CNOT8Q9UFF9 292 aaKnown RBP17.15■□□□□ 0.34
CXCL1-201ENST00000395761 SLC12A6Q9UHW9 1150 aa17.15■□□□□ 0.34
CXCL1-201ENST00000395761 NENFQ9UMX5 172 aa17.15■□□□□ 0.34
CXCL1-201ENST00000395761 TBC1D3BA6NDS4 549 aa17.14■□□□□ 0.33
CXCL1-201ENST00000395761 TBL1XO60907 577 aa17.14■□□□□ 0.33
CXCL1-201ENST00000395761 COL9A1P20849 921 aa17.14■□□□□ 0.33
CXCL1-201ENST00000395761 RDXP35241 583 aaKnown RBP17.14■□□□□ 0.33
CXCL1-201ENST00000395761 GGCXP38435 758 aa17.14■□□□□ 0.33
CXCL1-201ENST00000395761 DGKGP49619 791 aa17.14■□□□□ 0.33
CXCL1-201ENST00000395761 NUBP1P53384 320 aa17.14■□□□□ 0.33
CXCL1-201ENST00000395761 CCDC122Q5T0U0 273 aa17.14■□□□□ 0.33
CXCL1-201ENST00000395761 ALKBH5Q6P6C2 394 aaKnown RBP17.14■□□□□ 0.33
CXCL1-201ENST00000395761 DCUN1D2Q6PH85 259 aa17.14■□□□□ 0.33
CXCL1-201ENST00000395761 SND1Q7KZF4 910 aaKnown RBP eCLIP17.14■□□□□ 0.33
CXCL1-201ENST00000395761 C14orf80Q86SX3 495 aa17.14■□□□□ 0.33
CXCL1-201ENST00000395761 CHSY1Q86X52 802 aa17.14■□□□□ 0.33
CXCL1-201ENST00000395761 FAM131BQ86XD5 332 aa17.14■□□□□ 0.33
CXCL1-201ENST00000395761 MAML2Q8IZL2 1156 aaPredicted RBP17.14■□□□□ 0.33
CXCL1-201ENST00000395761 TRIM7Q9C029 511 aa17.14■□□□□ 0.33
CXCL1-201ENST00000395761 PARVAQ9NVD7 372 aa17.14■□□□□ 0.33
CXCL1-201ENST00000395761 STIM2Q9P246 746 aa17.14■□□□□ 0.33
CXCL1-201ENST00000395761 MYO1AQ9UBC5 1043 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms