RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 ATP2A3Q93084 1043 aa6.5□□□□□ -1.37
PTPN20-208ENST00000395727 RNF34Q969K3 372 aa6.5□□□□□ -1.37
PTPN20-208ENST00000395727 ELMO3Q96BJ8 720 aa6.5□□□□□ -1.37
PTPN20-208ENST00000395727 CHFRQ96EP1 664 aa6.5□□□□□ -1.37
PTPN20-208ENST00000395727 TIGD1Q96MW7 591 aa6.5□□□□□ -1.37
PTPN20-208ENST00000395727 GSDMAQ96QA5 445 aa6.5□□□□□ -1.37
PTPN20-208ENST00000395727 MMS19Q96T76 1030 aa6.5□□□□□ -1.37
PTPN20-208ENST00000395727 SNX25Q9H3E2 840 aa6.5□□□□□ -1.37
PTPN20-208ENST00000395727 LMAN1LQ9HAT1 526 aa6.5□□□□□ -1.37
PTPN20-208ENST00000395727 CSNK1G1Q9HCP0 422 aa6.5□□□□□ -1.37
PTPN20-208ENST00000395727 PNPLA8Q9NP80 782 aa6.5□□□□□ -1.37
PTPN20-208ENST00000395727 DMAP1Q9NPF5 467 aaPredicted RBP6.5□□□□□ -1.37
PTPN20-208ENST00000395727 HPS4Q9NQG7 708 aa6.5□□□□□ -1.37
PTPN20-208ENST00000395727 C1GALT1Q9NS00 363 aa6.5□□□□□ -1.37
PTPN20-208ENST00000395727 GKN1Q9NS71 199 aa6.5□□□□□ -1.37
PTPN20-208ENST00000395727 RMND1Q9NWS8 449 aa6.5□□□□□ -1.37
PTPN20-208ENST00000395727 GTSE1Q9NYZ3 720 aa6.5□□□□□ -1.37
PTPN20-208ENST00000395727 NDRG2Q9UN36 371 aaKnown RBP6.5□□□□□ -1.37
PTPN20-208ENST00000395727 MAGED2Q9UNF1 606 aaPredicted RBP6.5□□□□□ -1.37
PTPN20-208ENST00000395727 CCL26Q9Y258 94 aa6.5□□□□□ -1.37
PTPN20-208ENST00000395727 FRMD4BQ9Y2L6 1034 aa6.5□□□□□ -1.37
PTPN20-208ENST00000395727 R4GN57 208 aa6.5□□□□□ -1.37
PTPN20-208ENST00000395727 WDFY4Q6ZS81 3184 aa6.5□□□□□ -1.37
PTPN20-208ENST00000395727 ZNF840PA6NDX5 716 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 F8VP50 259 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 K7ESF4 209 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 AKAP3O75969 853 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 CKMP06732 381 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 ZDHHC11BP0C7U3 371 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 DRD1P21728 446 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 RPL13P26373 211 aaKnown RBP6.49□□□□□ -1.37
PTPN20-208ENST00000395727 PSMC2P35998 433 aaKnown RBP6.49□□□□□ -1.37
PTPN20-208ENST00000395727 EIF4A3P38919 411 aaKnown RBP6.49□□□□□ -1.37
PTPN20-208ENST00000395727 GRIK1P39086 918 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 EIF2DP41214 584 aaKnown RBP6.49□□□□□ -1.37
PTPN20-208ENST00000395727 CXCL12P48061 93 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 VAMP7P51809 220 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 DLG4P78352 724 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 CYP27A1Q02318 531 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 CSTF1Q05048 431 aaKnown RBP6.49□□□□□ -1.37
PTPN20-208ENST00000395727 TNK2Q07912 1038 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 BIRC3Q13489 604 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 NFKBIBQ15653 356 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 CC2D1AQ6P1N0 951 aaPredicted RBP6.49□□□□□ -1.37
PTPN20-208ENST00000395727 FBXL19Q6PCT2 694 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 DDX42Q86XP3 938 aaKnown RBP eCLIP6.49□□□□□ -1.37
PTPN20-208ENST00000395727 SCN4BQ8IWT1 228 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 FUKQ8N0W3 1084 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 CPA6Q8N4T0 437 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 ZNF276Q8N554 614 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 TTC39CQ8N584 583 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 GOLM1Q8NBJ4 401 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 ENGASEQ8NFI3 743 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 OR6B3Q8NGW1 331 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 CCDC26Q8TAB7 109 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 RIN3Q8TB24 985 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 ATRIPQ8WXE1 791 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 OTUB2Q96DC9 234 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 SMARCD1Q96GM5 515 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 ZFYVE19Q96K21 471 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 SLITRK1Q96PX8 696 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 SLC22A12Q96S37 553 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 B3GNT5Q9BYG0 378 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 IMPG2Q9BZV3 1241 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 ZNF518BQ9C0D4 1074 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 WNT10AQ9GZT5 417 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 GOLPH3LQ9H4A5 285 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 ECT2Q9H8V3 914 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 CYP3A43Q9HB55 503 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 TMEM30AQ9NV96 361 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 TRPM5Q9NZQ8 1165 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 ADAMTS1Q9UHI8 967 aa6.49□□□□□ -1.37
PTPN20-208ENST00000395727 ZFHX2Q9C0A1 2572 aaPredicted RBP6.49□□□□□ -1.37
PTPN20-208ENST00000395727 C2orf78A6NCI8 922 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 OTOL1A6NHN0 477 aaPredicted RBP6.48□□□□□ -1.37
PTPN20-208ENST00000395727 SLC9A3R1O14745 358 aaPredicted RBP6.48□□□□□ -1.37
PTPN20-208ENST00000395727 SLC16A3O15427 465 aaKnown RBP6.48□□□□□ -1.37
PTPN20-208ENST00000395727 STX10O60499 249 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 FOXD2O60548 495 aaPredicted RBP6.48□□□□□ -1.37
PTPN20-208ENST00000395727 RNGTTO60942 597 aaKnown RBP6.48□□□□□ -1.37
PTPN20-208ENST00000395727 ATG13O75143 517 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 NFATC1O95644 943 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 HLA-DRAP01903 254 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 PDGFRBP09619 1106 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 HDCP19113 662 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 TRIM21P19474 475 aaKnown RBP6.48□□□□□ -1.37
PTPN20-208ENST00000395727 YWHAQP27348 245 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 GJA4P35212 333 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 ADMP35318 185 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 PPP1R2P41236 205 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 PIK3CAP42336 1068 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 SOX9P48436 509 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 CACNA2D1P54289 1103 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 LRRC63Q05C16 580 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 GRSF1Q12849 480 aaKnown RBP eCLIP6.48□□□□□ -1.37
PTPN20-208ENST00000395727 PON2Q15165 354 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 SNAP47Q5SQN1 464 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 SDHAF4Q5VUM1 108 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 KRT39Q6A163 491 aa6.48□□□□□ -1.37
PTPN20-208ENST00000395727 LAIR1Q6GTX8 287 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms