RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 IZUMO2Q6UXV1 221 aa18.91■□□□□ 0.62
PCDHA1-202ENST00000394633 TTC1Q99614 292 aa18.91■□□□□ 0.62
PCDHA1-202ENST00000394633 NT5C1AQ9BXI3 368 aa18.91■□□□□ 0.62
PCDHA1-202ENST00000394633 PDZD7Q9H5P4 517 aa18.91■□□□□ 0.62
PCDHA1-202ENST00000394633 ASB7Q9H672 318 aa18.91■□□□□ 0.62
PCDHA1-202ENST00000394633 PAPOLBQ9NRJ5 636 aaKnown RBP18.91■□□□□ 0.62
PCDHA1-202ENST00000394633 NDE1Q9NXR1 346 aa18.91■□□□□ 0.62
PCDHA1-202ENST00000394633 DNAJB4Q9UDY4 337 aa18.91■□□□□ 0.62
PCDHA1-202ENST00000394633 KIAA1257Q9ULG3 409 aa18.91■□□□□ 0.62
PCDHA1-202ENST00000394633 DNAJC16Q9Y2G8 782 aa18.91■□□□□ 0.62
PCDHA1-202ENST00000394633 ZNF638Q14966 1978 aaKnown RBP18.91■□□□□ 0.62
PCDHA1-202ENST00000394633 GABBR2O75899 941 aa18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 AMHR2Q16671 573 aa18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 RABGAP1LQ5R372 815 aa18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 GJC2Q5T442 439 aaPredicted RBP18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 TMCO4Q5TGY1 634 aa18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 TTC30AQ86WT1 665 aa18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 SCUBE3Q8IX30 993 aa18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 PPP1R14CQ8TAE6 165 aa18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 SOX13Q9UN79 622 aa18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 BAG2O95816 211 aa18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 UBTFL6P0CB48 400 aaPredicted RBP18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 CNTFP26441 200 aa18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 L1CAMP32004 1257 aa18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 PAPOLAP51003 745 aaKnown RBP18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 DSG1Q02413 1049 aa18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 TNFAIP2Q03169 654 aa18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 SEMA5AQ13591 1074 aa18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 DBN1Q16643 649 aa18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 PKDCCQ504Y2 493 aa18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 STXBP5Q5T5C0 1151 aa18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 STEAP4Q687X5 459 aa18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 KCNT2Q6UVM3 1135 aa18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 MARK2Q7KZI7 788 aaKnown RBP18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 PIWIL2Q8TC59 973 aaKnown RBP18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 QKIQ96PU8 341 aaKnown RBP eCLIP18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 NR1H4Q96RI1 486 aaPredicted RBP18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 PPP1R16BQ96T49 567 aa18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 ECSITQ9BQ95 431 aa18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 SORCS3Q9UPU3 1222 aa18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 NR2E3Q9Y5X4 410 aa18.9■□□□□ 0.62
PCDHA1-202ENST00000394633 TMEM88BA6NKF7 163 aa18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 ZNF487B1APH4 448 aa18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 PAPSS1O43252 624 aaPredicted RBP18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 STRNO43815 780 aa18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 ALDOAP04075 364 aaKnown RBP18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 CRABP2P29373 138 aa18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 ATXN1P54253 815 aaKnown RBP18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 SLC25A3Q00325 362 aa18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 PDE1BQ01064 536 aa18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 N4BP2L1Q5TBK1 243 aaPredicted RBP18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 PAXIP1Q6ZW49 1069 aaPredicted RBP18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 WDR75Q8IWA0 830 aaKnown RBP18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 GSTCDQ8NEC7 633 aa18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 SPATA33Q96N06 139 aa18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 TRAPPC9Q96Q05 1148 aa18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 SH3GL3Q99963 347 aa18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 SLC4A5Q9BY07 1137 aa18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 B3GNT5Q9BYG0 378 aa18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 NFKBIZQ9BYH8 718 aa18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 DPP3Q9NY33 737 aa18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 WDR27A2RRH5 827 aa18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 SLC1A6P48664 564 aa18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 NIPAL4Q0D2K0 466 aa18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 FAM187BQ17R55 369 aa18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 ATG14Q6ZNE5 492 aa18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 CYS1Q717R9 158 aa18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 PLEKHH3Q7Z736 793 aa18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 SIKE1Q9BRV8 207 aa18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 GCOM2Q9BZD3 368 aaPredicted RBP18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 DHX35Q9H5Z1 703 aaKnown RBP18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 HESX1Q9UBX0 185 aa18.89■□□□□ 0.61
PCDHA1-202ENST00000394633 F5H423 210 aaPredicted RBP18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 TPP1O14773 563 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 BUD23O43709 281 aaKnown RBP18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 HBP1O60381 514 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 ALDH1A2O94788 518 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 C22orf31O95567 290 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 LYNP07948 512 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 KCNA4P22459 653 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 CALRP27797 417 aaKnown RBP18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 PHKA2P46019 1235 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 CRADDP78560 199 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 RBP5P82980 135 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 CDC16Q13042 620 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 CRHR2Q13324 411 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 PDE1CQ14123 709 aaPredicted RBP18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 DPYSL2Q16555 572 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 CWF19L1Q69YN2 538 aaKnown RBP18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 DENND5BQ6ZUT9 1274 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 MAVSQ7Z434 540 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 DPP9Q86TI2 863 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 TMEM110Q86TL2 294 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 POU5F2Q8N7G0 328 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 NPLOC4Q8TAT6 608 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 MPHOSPH6Q99547 160 aaKnown RBP18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 DDX50Q9BQ39 737 aaKnown RBP18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 ITGA11Q9UKX5 1188 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 A0A087WZ62 844 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 ASB14A6NK59 587 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms