RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 MRPS5P82675 430 aaKnown RBP16.02■□□□□ 0.16
PTBP1-204ENST00000394601 PRKD1Q15139 912 aaPredicted RBP16.02■□□□□ 0.16
PTBP1-204ENST00000394601 SLC45A4Q5BKX6 768 aa16.02■□□□□ 0.16
PTBP1-204ENST00000394601 ACOT1Q86TX2 421 aa16.02■□□□□ 0.16
PTBP1-204ENST00000394601 ALKBH8Q96BT7 664 aaKnown RBP16.02■□□□□ 0.16
PTBP1-204ENST00000394601 KIF12Q96FN5 646 aa16.02■□□□□ 0.16
PTBP1-204ENST00000394601 SNX27Q96L92 541 aa16.02■□□□□ 0.16
PTBP1-204ENST00000394601 TRIM56Q9BRZ2 755 aaKnown RBP16.02■□□□□ 0.16
PTBP1-204ENST00000394601 TLE6Q9H808 572 aa16.02■□□□□ 0.16
PTBP1-204ENST00000394601 PPM1HQ9ULR3 514 aa16.02■□□□□ 0.16
PTBP1-204ENST00000394601 BRCA2P51587 3418 aa16.02■□□□□ 0.16
PTBP1-204ENST00000394601 BOLA2-SMG1P6H3BVE0 249 aa16.02■□□□□ 0.15
PTBP1-204ENST00000394601 PRPSAP2O60256 369 aa16.02■□□□□ 0.15
PTBP1-204ENST00000394601 MYL2P10916 166 aa16.02■□□□□ 0.15
PTBP1-204ENST00000394601 VAV1P15498 845 aa16.02■□□□□ 0.15
PTBP1-204ENST00000394601 OSBPP22059 807 aa16.02■□□□□ 0.15
PTBP1-204ENST00000394601 ADORA2AP29274 412 aa16.02■□□□□ 0.15
PTBP1-204ENST00000394601 PTK7Q13308 1070 aa16.02■□□□□ 0.15
PTBP1-204ENST00000394601 MPP3Q13368 585 aa16.02■□□□□ 0.15
PTBP1-204ENST00000394601 SOWAHAQ2M3V2 549 aa16.02■□□□□ 0.15
PTBP1-204ENST00000394601 BOLA3Q53S33 107 aa16.02■□□□□ 0.15
PTBP1-204ENST00000394601 RAPH1Q70E73 1250 aa16.02■□□□□ 0.15
PTBP1-204ENST00000394601 FASTKD5Q7L8L6 764 aaKnown RBP16.02■□□□□ 0.15
PTBP1-204ENST00000394601 KBTBD7Q8WVZ9 684 aa16.02■□□□□ 0.15
PTBP1-204ENST00000394601 INPP5DQ92835 1189 aa16.02■□□□□ 0.15
PTBP1-204ENST00000394601 C18orf25Q96B23 403 aaPredicted RBP16.02■□□□□ 0.15
PTBP1-204ENST00000394601 NSL1Q96IY1 281 aa16.02■□□□□ 0.15
PTBP1-204ENST00000394601 EIF2AQ9BY44 585 aaKnown RBP16.02■□□□□ 0.15
PTBP1-204ENST00000394601 BLOC1S6Q9UL45 172 aa16.02■□□□□ 0.15
PTBP1-204ENST00000394601 SLC15A5A6NIM6 579 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 KCNN4O15554 427 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 METTL18O95568 372 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 LMNAP02545 664 aaKnown RBP16.01■□□□□ 0.15
PTBP1-204ENST00000394601 NELFEP18615 380 aaKnown RBP16.01■□□□□ 0.15
PTBP1-204ENST00000394601 LIMS2Q7Z4I7 341 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 ZNF398Q8TD17 642 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 ZNF670Q9BS34 389 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 TMEM120AQ9BXJ8 343 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 TRIM55Q9BYV6 548 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 GRIP2Q9C0E4 1043 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 VTA1Q9NP79 307 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 RAB6BQ9NRW1 208 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.01■□□□□ 0.15
PTBP1-204ENST00000394601 H3BRB1 525 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 UGT1A9O60656 530 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 SORBS2O94875 1100 aaKnown RBP16.01■□□□□ 0.15
PTBP1-204ENST00000394601 STAMBPO95630 424 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 IL1BP01584 269 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 ZNF200P98182 395 aaPredicted RBP16.01■□□□□ 0.15
PTBP1-204ENST00000394601 TFDP2Q14188 446 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 DPYSL2Q16555 572 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 MMEL1Q495T6 779 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 LDLRAD1Q5T700 205 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 RNF168Q8IYW5 571 aaPredicted RBP16.01■□□□□ 0.15
PTBP1-204ENST00000394601 GSTCDQ8NEC7 633 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 NLRP7Q8WX94 980 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 HSPBAP1Q96EW2 488 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 APOPT1Q96IL0 206 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 GCNAQ96QF7 691 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 TUT1Q9H6E5 874 aaKnown RBP16.01■□□□□ 0.15
PTBP1-204ENST00000394601 MANSC1Q9H8J5 431 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 LIN28AQ9H9Z2 209 aaKnown RBP16.01■□□□□ 0.15
PTBP1-204ENST00000394601 UGT1A7Q9HAW7 530 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 UGT1A10Q9HAW8 530 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 UGT1A8Q9HAW9 530 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 PAK5Q9P286 719 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 ZNF236Q9UL36 1845 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 RFPL1O75677 317 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 DLDP09622 509 aaKnown RBP16.01■□□□□ 0.15
PTBP1-204ENST00000394601 CCR3P51677 355 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 MED21Q13503 144 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 HIC1Q14526 733 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 TRIP10Q15642 601 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 GRIK4Q16099 956 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 FAXCQ5TGI0 409 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 RIPOR1Q6ZS17 1223 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 TRIM67Q6ZTA4 783 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 SIGLEC10Q96LC7 697 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 TBCBQ99426 244 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 NRDE2Q9H7Z3 1164 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 FAM49BQ9NUQ9 324 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 SNTG2Q9NY99 539 aa16.01■□□□□ 0.15
PTBP1-204ENST00000394601 LOC100653049A0A140TA62 436 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 KRT34O76011 436 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 SMPD1P17405 629 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 GBE1Q04446 702 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 ASPHQ12797 758 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 PEX6Q13608 980 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 RABGAP1LQ5R372 815 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 ARHGAP17Q68EM7 881 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 RBM44Q6ZP01 1051 aaKnown RBP16■□□□□ 0.15
PTBP1-204ENST00000394601 ARHGAP18Q8N392 663 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 MPP5Q8N3R9 675 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 GSDMBQ8TAX9 411 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 RAB3IL1Q8TBN0 382 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 GATA6Q92908 595 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 OXNAD1Q96HP4 312 aaPredicted RBP16■□□□□ 0.15
PTBP1-204ENST00000394601 NMUR2Q9GZQ4 415 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 DERAQ9Y315 318 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 MFHAS1Q9Y4C4 1052 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms