RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 CDK9P50750 372 aaKnown RBP23.4■■□□□ 1.34
RARA-202ENST00000394081 FLOT2Q14254 428 aa23.4■■□□□ 1.34
RARA-202ENST00000394081 CCDC153Q494R4 210 aa23.4■■□□□ 1.34
RARA-202ENST00000394081 ARHGEF16Q5VV41 709 aa23.4■■□□□ 1.34
RARA-202ENST00000394081 CDKL3Q8IVW4 592 aaPredicted RBP23.4■■□□□ 1.34
RARA-202ENST00000394081 KYQ8NBH2 561 aa23.4■■□□□ 1.34
RARA-202ENST00000394081 KBTBD7Q8WVZ9 684 aa23.4■■□□□ 1.34
RARA-202ENST00000394081 FAM151AQ8WW52 585 aa23.4■■□□□ 1.34
RARA-202ENST00000394081 TRIM56Q9BRZ2 755 aaKnown RBP23.4■■□□□ 1.34
RARA-202ENST00000394081 SHCBP1LQ9BZQ2 653 aa23.4■■□□□ 1.34
RARA-202ENST00000394081 CDH19Q9H159 772 aa23.4■■□□□ 1.34
RARA-202ENST00000394081 TJP2Q9UDY2 1190 aa23.4■■□□□ 1.34
RARA-202ENST00000394081 APPL1Q9UKG1 709 aa23.4■■□□□ 1.34
RARA-202ENST00000394081 PRSS51A0A1B0GVH4 220 aa23.39■■□□□ 1.34
RARA-202ENST00000394081 E9PBE3 544 aa23.39■■□□□ 1.34
RARA-202ENST00000394081 ZBTB14O43829 449 aa23.39■■□□□ 1.34
RARA-202ENST00000394081 ERBB2P04626 1255 aa23.39■■□□□ 1.34
RARA-202ENST00000394081 MLNP12872 115 aa23.39■■□□□ 1.34
RARA-202ENST00000394081 GLDCP23378 1020 aa23.39■■□□□ 1.34
RARA-202ENST00000394081 BCAR1P56945 870 aa23.39■■□□□ 1.34
RARA-202ENST00000394081 RAB15P59190 212 aa23.39■■□□□ 1.34
RARA-202ENST00000394081 TRPC3Q13507 836 aa23.39■■□□□ 1.34
RARA-202ENST00000394081 SLC9A4Q6AI14 798 aa23.39■■□□□ 1.34
RARA-202ENST00000394081 ZPBP2Q6X784 338 aa23.39■■□□□ 1.34
RARA-202ENST00000394081 BNC2Q6ZN30 1099 aaPredicted RBP23.39■■□□□ 1.34
RARA-202ENST00000394081 BBS5Q8N3I7 341 aa23.39■■□□□ 1.34
RARA-202ENST00000394081 SLC38A10Q9HBR0 1119 aa23.39■■□□□ 1.34
RARA-202ENST00000394081 RGSL1A5PLK6 1076 aa23.39■■□□□ 1.33
RARA-202ENST00000394081 TPP1O14773 563 aa23.39■■□□□ 1.33
RARA-202ENST00000394081 KCNA2P16389 499 aa23.39■■□□□ 1.33
RARA-202ENST00000394081 ARL2P36404 184 aa23.39■■□□□ 1.33
RARA-202ENST00000394081 ZNF423Q2M1K9 1284 aa23.39■■□□□ 1.33
RARA-202ENST00000394081 PIGGQ5H8A4 983 aa23.39■■□□□ 1.33
RARA-202ENST00000394081 PACS1Q6VY07 963 aa23.39■■□□□ 1.33
RARA-202ENST00000394081 VSIG10LQ86VR7 867 aa23.39■■□□□ 1.33
RARA-202ENST00000394081 MTMR12Q9C0I1 747 aa23.39■■□□□ 1.33
RARA-202ENST00000394081 SH3GLB1Q9Y371 365 aa23.39■■□□□ 1.33
RARA-202ENST00000394081 hCG_2014768A0A024R1R8 64 aa23.38■■□□□ 1.33
RARA-202ENST00000394081 TMEM114B3SHH9 223 aa23.38■■□□□ 1.33
RARA-202ENST00000394081 WDR46O15213 610 aaKnown RBP23.38■■□□□ 1.33
RARA-202ENST00000394081 ATP6V1G1O75348 118 aa23.38■■□□□ 1.33
RARA-202ENST00000394081 PRKCGP05129 697 aa23.38■■□□□ 1.33
RARA-202ENST00000394081 HNRNPCP07910 306 aaKnown RBP eCLIP23.38■■□□□ 1.33
RARA-202ENST00000394081 HK2P52789 917 aa23.38■■□□□ 1.33
RARA-202ENST00000394081 ZNF699Q32M78 642 aa23.38■■□□□ 1.33
RARA-202ENST00000394081 BOLA3Q53S33 107 aa23.38■■□□□ 1.33
RARA-202ENST00000394081 CEP70Q8NHQ1 597 aa23.38■■□□□ 1.33
RARA-202ENST00000394081 RP9Q8TA86 221 aaKnown RBP23.38■■□□□ 1.33
RARA-202ENST00000394081 VPS33BQ9H267 617 aa23.38■■□□□ 1.33
RARA-202ENST00000394081 COG4Q9H9E3 785 aa23.38■■□□□ 1.33
RARA-202ENST00000394081 XPNPEP3Q9NQH7 507 aa23.38■■□□□ 1.33
RARA-202ENST00000394081 LRRIQ4A6NIV6 560 aa23.38■■□□□ 1.33
RARA-202ENST00000394081 PRPSAP2O60256 369 aa23.38■■□□□ 1.33
RARA-202ENST00000394081 H2AFYO75367 372 aaKnown RBP23.38■■□□□ 1.33
RARA-202ENST00000394081 CD19P15391 556 aa23.38■■□□□ 1.33
RARA-202ENST00000394081 GPD1P21695 349 aa23.38■■□□□ 1.33
RARA-202ENST00000394081 ALDH3B2P48448 385 aa23.38■■□□□ 1.33
RARA-202ENST00000394081 GALK1P51570 392 aa23.38■■□□□ 1.33
RARA-202ENST00000394081 IYDQ6PHW0 289 aa23.38■■□□□ 1.33
RARA-202ENST00000394081 FAIMQ9NVQ4 179 aa23.38■■□□□ 1.33
RARA-202ENST00000394081 NR2E3Q9Y5X4 410 aa23.38■■□□□ 1.33
RARA-202ENST00000394081 ITGBL1O95965 494 aaPredicted RBP23.37■■□□□ 1.33
RARA-202ENST00000394081 PSMC3P17980 439 aa23.37■■□□□ 1.33
RARA-202ENST00000394081 ARRB2P32121 409 aa23.37■■□□□ 1.33
RARA-202ENST00000394081 TXNL4AP83876 142 aaKnown RBP23.37■■□□□ 1.33
RARA-202ENST00000394081 TMED1Q13445 227 aa23.37■■□□□ 1.33
RARA-202ENST00000394081 MTERF2Q49AM1 385 aa23.37■■□□□ 1.33
RARA-202ENST00000394081 SCARA3Q6AZY7 606 aa23.37■■□□□ 1.33
RARA-202ENST00000394081 ABHD15Q6UXT9 468 aa23.37■■□□□ 1.33
RARA-202ENST00000394081 ATG14Q6ZNE5 492 aa23.37■■□□□ 1.33
RARA-202ENST00000394081 CCDC60Q8IWA6 550 aaPredicted RBP23.37■■□□□ 1.33
RARA-202ENST00000394081 LENG8Q96PV6 779 aaPredicted RBP23.37■■□□□ 1.33
RARA-202ENST00000394081 FERMT1Q9BQL6 677 aa23.37■■□□□ 1.33
RARA-202ENST00000394081 ADPGKQ9BRR6 497 aa23.37■■□□□ 1.33
RARA-202ENST00000394081 JPH1Q9HDC5 661 aaPredicted RBP23.37■■□□□ 1.33
RARA-202ENST00000394081 PCDHGB4Q9UN71 923 aa23.37■■□□□ 1.33
RARA-202ENST00000394081 PCDHGB5Q9Y5G0 923 aa23.37■■□□□ 1.33
RARA-202ENST00000394081 MRPS22P82650 360 aaKnown RBP23.36■■□□□ 1.33
RARA-202ENST00000394081 SEMA5AQ13591 1074 aa23.36■■□□□ 1.33
RARA-202ENST00000394081 DPYSQ14117 519 aa23.36■■□□□ 1.33
RARA-202ENST00000394081 HERC3Q15034 1050 aa23.36■■□□□ 1.33
RARA-202ENST00000394081 VWA5B1Q5TIE3 1220 aa23.36■■□□□ 1.33
RARA-202ENST00000394081 KLHL35Q6PF15 583 aa23.36■■□□□ 1.33
RARA-202ENST00000394081 RNF168Q8IYW5 571 aaPredicted RBP23.36■■□□□ 1.33
RARA-202ENST00000394081 PGAM4Q8N0Y7 254 aa23.36■■□□□ 1.33
RARA-202ENST00000394081 MPP5Q8N3R9 675 aa23.36■■□□□ 1.33
RARA-202ENST00000394081 PQLC3Q8N755 202 aa23.36■■□□□ 1.33
RARA-202ENST00000394081 EFCAB3Q8N7B9 438 aa23.36■■□□□ 1.33
RARA-202ENST00000394081 NLRP7Q8WX94 980 aa23.36■■□□□ 1.33
RARA-202ENST00000394081 SREK1Q8WXA9 508 aaKnown RBP23.36■■□□□ 1.33
RARA-202ENST00000394081 XYLT2Q9H1B5 865 aa23.36■■□□□ 1.33
RARA-202ENST00000394081 ZBTB12Q9Y330 459 aaPredicted RBP23.36■■□□□ 1.33
RARA-202ENST00000394081 H3BSA7 217 aa23.36■■□□□ 1.33
RARA-202ENST00000394081 BCAS2O75934 225 aaPredicted RBP23.36■■□□□ 1.33
RARA-202ENST00000394081 IL4RP24394 825 aa23.36■■□□□ 1.33
RARA-202ENST00000394081 NUDT2P50583 147 aa23.36■■□□□ 1.33
RARA-202ENST00000394081 TUBA4AP68366 448 aa23.36■■□□□ 1.33
RARA-202ENST00000394081 COG7P83436 770 aa23.36■■□□□ 1.33
RARA-202ENST00000394081 RFTN1Q14699 578 aaPredicted RBP23.36■■□□□ 1.33
RARA-202ENST00000394081 DUS1LQ6P1R4 473 aaKnown RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms