RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 OLFM3Q96PB7 478 aa20.31■□□□□ 0.84
RAB5C-202ENST00000393860 EPAS1Q99814 870 aa20.31■□□□□ 0.84
RAB5C-202ENST00000393860 FARP1Q9Y4F1 1045 aaPredicted RBP20.31■□□□□ 0.84
RAB5C-202ENST00000393860 RIPK2O43353 540 aa20.31■□□□□ 0.84
RAB5C-202ENST00000393860 BANF1O75531 89 aa20.31■□□□□ 0.84
RAB5C-202ENST00000393860 CSPG5O95196 566 aa20.31■□□□□ 0.84
RAB5C-202ENST00000393860 ACSL3O95573 720 aa20.31■□□□□ 0.84
RAB5C-202ENST00000393860 URODP06132 367 aa20.31■□□□□ 0.84
RAB5C-202ENST00000393860 HMBSP08397 361 aa20.31■□□□□ 0.84
RAB5C-202ENST00000393860 EPHB2P29323 1055 aa20.31■□□□□ 0.84
RAB5C-202ENST00000393860 FPGSQ05932 587 aa20.31■□□□□ 0.84
RAB5C-202ENST00000393860 MTM1Q13496 603 aa20.31■□□□□ 0.84
RAB5C-202ENST00000393860 MORF4L2Q15014 288 aa20.31■□□□□ 0.84
RAB5C-202ENST00000393860 RWDD4Q6NW29 188 aaKnown RBP20.31■□□□□ 0.84
RAB5C-202ENST00000393860 LRIG3Q6UXM1 1119 aa20.31■□□□□ 0.84
RAB5C-202ENST00000393860 MIB1Q86YT6 1006 aa20.31■□□□□ 0.84
RAB5C-202ENST00000393860 NPWQ8N729 165 aa20.31■□□□□ 0.84
RAB5C-202ENST00000393860 SERPINB11Q96P15 392 aa20.31■□□□□ 0.84
RAB5C-202ENST00000393860 CENPHQ9H3R5 247 aa20.31■□□□□ 0.84
RAB5C-202ENST00000393860 CYP4F11Q9HBI6 524 aa20.31■□□□□ 0.84
RAB5C-202ENST00000393860 TLR8Q9NR97 1041 aaKnown RBP20.31■□□□□ 0.84
RAB5C-202ENST00000393860 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.31■□□□□ 0.84
RAB5C-202ENST00000393860 F5H423 210 aaPredicted RBP20.3■□□□□ 0.84
RAB5C-202ENST00000393860 XRCC4Q13426 336 aa20.3■□□□□ 0.84
RAB5C-202ENST00000393860 PPIGQ13427 754 aaKnown RBP eCLIP20.3■□□□□ 0.846e-7■□□□□ 9
RAB5C-202ENST00000393860 PAFAH1B3Q15102 231 aaKnown RBP20.3■□□□□ 0.84
RAB5C-202ENST00000393860 BRMS1LQ5PSV4 323 aa20.3■□□□□ 0.84
RAB5C-202ENST00000393860 C10orf120Q5SQS8 335 aa20.3■□□□□ 0.84
RAB5C-202ENST00000393860 MSANTD2Q6P1R3 559 aa20.3■□□□□ 0.84
RAB5C-202ENST00000393860 DDX53Q86TM3 631 aaKnown RBP20.3■□□□□ 0.84
RAB5C-202ENST00000393860 PPIL6Q8IXY8 311 aa20.3■□□□□ 0.84
RAB5C-202ENST00000393860 TFB1MQ8WVM0 346 aaKnown RBP20.3■□□□□ 0.84
RAB5C-202ENST00000393860 C9orf72Q96LT7 481 aa20.3■□□□□ 0.84
RAB5C-202ENST00000393860 RBM15Q96T37 977 aaKnown RBP eCLIP20.3■□□□□ 0.84
RAB5C-202ENST00000393860 ZBED2Q9BTP6 218 aa20.3■□□□□ 0.84
RAB5C-202ENST00000393860 CCSER2Q9H7U1 834 aa20.3■□□□□ 0.84
RAB5C-202ENST00000393860 SAYSD1Q9NPB0 183 aa20.3■□□□□ 0.84
RAB5C-202ENST00000393860 AFF4Q9UHB7 1163 aaKnown RBP20.3■□□□□ 0.84
RAB5C-202ENST00000393860 CFAP69A5D8W1 941 aa20.29■□□□□ 0.84
RAB5C-202ENST00000393860 TMEM63AO94886 807 aa20.29■□□□□ 0.84
RAB5C-202ENST00000393860 GJB5O95377 273 aa20.29■□□□□ 0.84
RAB5C-202ENST00000393860 IFFO1Q0D2I5 559 aa20.29■□□□□ 0.84
RAB5C-202ENST00000393860 AP1B1Q10567 949 aa20.29■□□□□ 0.84
RAB5C-202ENST00000393860 KYNUQ16719 465 aa20.29■□□□□ 0.84
RAB5C-202ENST00000393860 KCTD16Q68DU8 428 aa20.29■□□□□ 0.84
RAB5C-202ENST00000393860 NAT8LQ8N9F0 302 aa20.29■□□□□ 0.84
RAB5C-202ENST00000393860 CCNYQ8ND76 341 aa20.29■□□□□ 0.84
RAB5C-202ENST00000393860 CEP41Q9BYV8 373 aa20.29■□□□□ 0.84
RAB5C-202ENST00000393860 NINJ2Q9NZG7 142 aa20.29■□□□□ 0.84
RAB5C-202ENST00000393860 SHOC2Q9UQ13 582 aa20.29■□□□□ 0.84
RAB5C-202ENST00000393860 ACTN2P35609 894 aa20.29■□□□□ 0.84
RAB5C-202ENST00000393860 TBX4P57082 545 aa20.29■□□□□ 0.84
RAB5C-202ENST00000393860 FASTKD3Q14CZ7 662 aaKnown RBP20.29■□□□□ 0.84
RAB5C-202ENST00000393860 SKIDA1Q1XH10 827 aa20.29■□□□□ 0.84
RAB5C-202ENST00000393860 SPDYCQ5MJ68 293 aa20.29■□□□□ 0.84
RAB5C-202ENST00000393860 HEATR6Q6AI08 1181 aaKnown RBP20.29■□□□□ 0.84
RAB5C-202ENST00000393860 ZNF461Q8TAF7 563 aa20.29■□□□□ 0.84
RAB5C-202ENST00000393860 RTP4Q96DX8 246 aa20.29■□□□□ 0.84
RAB5C-202ENST00000393860 FCRL2Q96LA5 508 aaPredicted RBP20.29■□□□□ 0.84
RAB5C-202ENST00000393860 OSBPL2Q9H1P3 480 aa20.29■□□□□ 0.84
RAB5C-202ENST00000393860 PRDM12Q9H4Q4 367 aa20.29■□□□□ 0.84
RAB5C-202ENST00000393860 RAB6BQ9NRW1 208 aa20.29■□□□□ 0.84
RAB5C-202ENST00000393860 SEPT10Q9P0V9 454 aa20.29■□□□□ 0.84
RAB5C-202ENST00000393860 PAK5Q9P286 719 aa20.29■□□□□ 0.84
RAB5C-202ENST00000393860 SMIM23A6NLE4 172 aa20.28■□□□□ 0.84
RAB5C-202ENST00000393860 ABLIM3O94929 683 aa20.28■□□□□ 0.84
RAB5C-202ENST00000393860 HCAR3P49019 387 aa20.28■□□□□ 0.84
RAB5C-202ENST00000393860 TUFMP49411 452 aaKnown RBP20.28■□□□□ 0.84
RAB5C-202ENST00000393860 PPP2R5DQ14738 602 aa20.28■□□□□ 0.84
RAB5C-202ENST00000393860 PCGF5Q86SE9 256 aa20.28■□□□□ 0.84
RAB5C-202ENST00000393860 C14orf80Q86SX3 495 aa20.28■□□□□ 0.84
RAB5C-202ENST00000393860 FIBCD1Q8N539 461 aa20.28■□□□□ 0.84
RAB5C-202ENST00000393860 SH2D3CQ8N5H7 860 aa20.28■□□□□ 0.84
RAB5C-202ENST00000393860 DEPDC1BQ8WUY9 529 aa20.28■□□□□ 0.84
RAB5C-202ENST00000393860 CELF6Q96J87 481 aaKnown RBP20.28■□□□□ 0.84
RAB5C-202ENST00000393860 NEU3Q9UQ49 428 aa20.28■□□□□ 0.84
RAB5C-202ENST00000393860 TLR6Q9Y2C9 796 aa20.28■□□□□ 0.84
RAB5C-202ENST00000393860 YIPF1Q9Y548 306 aa20.28■□□□□ 0.84
RAB5C-202ENST00000393860 LAMA2P24043 3122 aaKnown RBP20.28■□□□□ 0.84
RAB5C-202ENST00000393860 KCNU1A8MYU2 1149 aa20.27■□□□□ 0.84
RAB5C-202ENST00000393860 GOLGA8KD6RF30 607 aa20.27■□□□□ 0.84
RAB5C-202ENST00000393860 FGF18O76093 207 aa20.27■□□□□ 0.84
RAB5C-202ENST00000393860 TMEM240Q5SV17 173 aa20.27■□□□□ 0.84
RAB5C-202ENST00000393860 TRMT10CQ7L0Y3 403 aaKnown RBP20.27■□□□□ 0.84
RAB5C-202ENST00000393860 HTR3CQ8WXA8 447 aa20.27■□□□□ 0.84
RAB5C-202ENST00000393860 HAPLN3Q96S86 360 aa20.27■□□□□ 0.84
RAB5C-202ENST00000393860 CLIC5Q9NZA1 410 aa20.27■□□□□ 0.84
RAB5C-202ENST00000393860 MARCH2Q9P0N8 246 aa20.27■□□□□ 0.84
RAB5C-202ENST00000393860 PCDHB12Q9Y5F1 795 aa20.27■□□□□ 0.84
RAB5C-202ENST00000393860 HS3ST4Q9Y661 456 aa20.27■□□□□ 0.84
RAB5C-202ENST00000393860 SLC12A8A0AV02 714 aa20.27■□□□□ 0.84
RAB5C-202ENST00000393860 SPATA31D3P0C874 917 aa20.27■□□□□ 0.84
RAB5C-202ENST00000393860 MAGEA4P43358 317 aa20.27■□□□□ 0.84
RAB5C-202ENST00000393860 PRKD1Q15139 912 aaPredicted RBP20.27■□□□□ 0.84
RAB5C-202ENST00000393860 KRT71Q3SY84 523 aa20.27■□□□□ 0.84
RAB5C-202ENST00000393860 FNBP1LQ5T0N5 605 aa20.27■□□□□ 0.84
RAB5C-202ENST00000393860 SPATA31D4Q6ZUB0 917 aa20.27■□□□□ 0.84
RAB5C-202ENST00000393860 BZW1Q7L1Q6 419 aaKnown RBP20.27■□□□□ 0.84
RAB5C-202ENST00000393860 SLC39A13Q96H72 371 aa20.27■□□□□ 0.84
RAB5C-202ENST00000393860 TTLL2Q9BWV7 592 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms