RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 C19orf18Q8NEA5 215 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 TSPAN18Q96SJ8 248 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 PLA2G12BQ9BX93 195 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 SPATC1LQ9H0A9 340 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 KCTD10Q9H3F6 313 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.08□□□□□ -1.76
UBR3-202ENST00000392632 SYNMO15061 1565 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 SLC15A5A6NIM6 579 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 CPSF4O95639 269 aaKnown RBP4.08□□□□□ -1.76
UBR3-202ENST00000392632 GLUD1P00367 558 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 HLA-DQA2P01906 255 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 FTH1P02794 183 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 RPSAP08865 295 aaKnown RBP4.08□□□□□ -1.76
UBR3-202ENST00000392632 SLC35G4P0C7Q5 338 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 PCSK2P16519 638 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 TYMPP19971 482 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 PRCPP42785 496 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 PSEN2P49810 448 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 CHN2P52757 468 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 RAB2AP61019 212 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 MAGOHP61326 146 aaKnown RBP4.08□□□□□ -1.76
UBR3-202ENST00000392632 HERVK_113P62684 666 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 GFPT1Q06210 699 aaPredicted RBP4.08□□□□□ -1.76
UBR3-202ENST00000392632 GRIK3Q13003 919 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 NR6A1Q15406 480 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 PTGISQ16647 500 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 TIMM50Q3ZCQ8 353 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 XKR4Q5GH76 650 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 TYW3Q6IPR3 259 aaKnown RBP4.08□□□□□ -1.76
UBR3-202ENST00000392632 LIN54Q6MZP7 749 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 RGMBQ6NW40 437 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 C16orf86Q6ZW13 317 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 R3HCC1LQ7Z5L2 792 aaKnown RBP4.08□□□□□ -1.76
UBR3-202ENST00000392632 JAMLQ86YT9 394 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 ZSCAN1Q8NBB4 408 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 AGR3Q8TD06 166 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 C1orf54Q8WWF1 131 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 CYGBQ8WWM9 190 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 E2F7Q96AV8 911 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 NSUN4Q96CB9 384 aaKnown RBP4.08□□□□□ -1.76
UBR3-202ENST00000392632 HAVCR1Q96D42 359 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 IL12RB2Q99665 862 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 KIFC1Q9BW19 673 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 SPATA9Q9BWV2 254 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 RERGLQ9H628 205 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 NMRAL1Q9HBL8 299 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 INTS10Q9NVR2 710 aaKnown RBP4.08□□□□□ -1.76
UBR3-202ENST00000392632 RBM22Q9NW64 420 aaKnown RBP eCLIP4.08□□□□□ -1.768e-8■■■■■ 39.2
UBR3-202ENST00000392632 TMEM260Q9NX78 707 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.08□□□□□ -1.76
UBR3-202ENST00000392632 TRIM24O15164 1050 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 CD3EAPO15446 510 aaKnown RBP4.08□□□□□ -1.76
UBR3-202ENST00000392632 PRODHO43272 600 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 KLHL41O60662 606 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 TMCC2O75069 709 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 KRT34O76011 436 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 SNX4O95219 450 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 STAU1O95793 577 aaKnown RBP4.08□□□□□ -1.76
UBR3-202ENST00000392632 CCDC166P0CW27 439 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 GHRP10912 638 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 HOXB6P17509 224 aaKnown RBP4.08□□□□□ -1.76
UBR3-202ENST00000392632 HDCP19113 662 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 OR1E1P30953 314 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 NRG3P56975 720 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 MRPS22P82650 360 aaKnown RBP4.08□□□□□ -1.76
UBR3-202ENST00000392632 USP4Q13107 963 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 ZNF211Q13398 564 aaPredicted RBP4.08□□□□□ -1.76
UBR3-202ENST00000392632 CUL2Q13617 745 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 MFSD10Q14728 455 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 SLC18A3Q16572 532 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 ZDHHC20Q5W0Z9 365 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 PRR23CQ6ZRP0 262 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 TLK2Q86UE8 772 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.08□□□□□ -1.76
UBR3-202ENST00000392632 DHX40Q8IX18 779 aaKnown RBP4.08□□□□□ -1.76
UBR3-202ENST00000392632 GRAMD1CQ8IYS0 662 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 SETD9Q8NE22 299 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 TRPV3Q8NET8 790 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 LPCAT1Q8NF37 534 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 MTMR9Q96QG7 549 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 SPRTNQ9H040 489 aaPredicted RBP4.08□□□□□ -1.76
UBR3-202ENST00000392632 DDX47Q9H0S4 455 aaKnown RBP4.08□□□□□ -1.76
UBR3-202ENST00000392632 HPS4Q9NQG7 708 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 ABHD10Q9NUJ1 306 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 COMMD8Q9NX08 183 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 KLK14Q9P0G3 267 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 TMEM63CQ9P1W3 806 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 MTRRQ9UBK8 725 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 SLC12A4Q9UP95 1085 aa4.08□□□□□ -1.76
UBR3-202ENST00000392632 KDM5CP41229 1560 aa4.07□□□□□ -1.76
UBR3-202ENST00000392632 GSAPA4D1B5 854 aa4.07□□□□□ -1.76
UBR3-202ENST00000392632 E7ENQ6 273 aa4.07□□□□□ -1.76
UBR3-202ENST00000392632 ATG13O75143 517 aa4.07□□□□□ -1.76
UBR3-202ENST00000392632 SEC24DO94855 1032 aaPredicted RBP4.07□□□□□ -1.76
UBR3-202ENST00000392632 TMEM253P0C7T8 217 aa4.07□□□□□ -1.76
UBR3-202ENST00000392632 OGNP20774 298 aaKnown RBP4.07□□□□□ -1.76
UBR3-202ENST00000392632 UGT1A5P35504 534 aa4.07□□□□□ -1.76
UBR3-202ENST00000392632 ABL2P42684 1182 aa4.07□□□□□ -1.76
UBR3-202ENST00000392632 TAB1Q15750 504 aa4.07□□□□□ -1.76
UBR3-202ENST00000392632 ATP13A5Q4VNC0 1218 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms