RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 HEATR6Q6AI08 1181 aaKnown RBP11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 MFSD5Q6N075 450 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 SH2D3CQ8N5H7 860 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 STKLD1Q8NE28 680 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 SEPT5Q99719 369 aaPredicted RBP11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 LRRC4CQ9HCJ2 640 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 CLIC5Q9NZA1 410 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 GMIPQ9P107 970 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 SFMBT1Q9UHJ3 866 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 SLC27A5Q9Y2P5 690 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 PTPRSQ13332 1948 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 E7ESA3 106 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 PPP1R12AO14974 1030 aaPredicted RBP11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 TMEM63AO94886 807 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 RAG1P15918 1043 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 HTR7P34969 479 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 GLUD2P49448 558 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 WDR5P61964 334 aaKnown RBP11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 DEFB103AP81534 67 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 CBLBQ13191 982 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 C6orf118Q5T5N4 469 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 CMTR2Q8IYT2 770 aaKnown RBP11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 CNPY4Q8N129 248 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 TMEM199Q8N511 208 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 HTR3CQ8WXA8 447 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 FBXO32Q969P5 355 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 PGM2Q96G03 612 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 C9orf72Q96LT7 481 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 ZNF558Q96NG5 402 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 KLC2Q9H0B6 622 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 CENPHQ9H3R5 247 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 PRDM5Q9NQX1 630 aaPredicted RBP11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 XPO7Q9UIA9 1087 aaKnown RBP11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 KIAA0100Q14667 2235 aaKnown RBP11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 KIAA1671Q9BY89 1806 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 TCRBV7S3A2A0A539 114 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 WDR27A2RRH5 827 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 NCAM2O15394 837 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 TCEA3O75764 348 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 SOAT2O75908 522 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 BAIAP3O94812 1187 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 LRIG2O94898 1065 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 SOD2P04179 222 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 VAV1P15498 845 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 LBX1P52954 281 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 DUSP4Q13115 394 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 PPP1R21Q6ZMI0 780 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 SLC39A11Q8N1S5 342 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 FRMD8Q9BZ67 464 aaPredicted RBP11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 RAB6BQ9NRW1 208 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 TLR6Q9Y2C9 796 aa11.81□□□□□ -0.52
SMARCAL1-203ENST00000392128 KCNU1A8MYU2 1149 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 GOLGA8MH3BSY2 632 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 RASGRF2O14827 1237 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 ADAM12O43184 909 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 MSI1O43347 362 aaKnown RBP11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 LAG3P18627 525 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 NR1D1P20393 614 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 SERPINB6P35237 376 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 GAD2Q05329 585 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 PDIA2Q13087 525 aaKnown RBP11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 SPOUT1Q5T280 376 aaKnown RBP11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 KDM7AQ6ZMT4 941 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 UHMK1Q8TAS1 419 aaKnown RBP11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 CCDC110Q8TBZ0 833 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 GPR152Q8TDT2 470 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 LRRN4Q8WUT4 740 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 TLCD1Q96CP7 247 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 SLC39A13Q96H72 371 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 LGMNQ99538 433 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 FERMT1Q9BQL6 677 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 HERC2P3Q9BVR0 1158 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 TLR8Q9NR97 1041 aaKnown RBP11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 OLA1Q9NTK5 396 aaKnown RBP11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 HSFX1Q9UBD0 423 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 NEU3Q9UQ49 428 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 A0A0A0MRY4 1105 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 PAGE1O75459 146 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 SLC2A3P11169 496 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 EPHB2P29323 1055 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 HOXC13P31276 330 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 SKOR1P84550 965 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 NRG1Q02297 640 aaPredicted RBP11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 DSG1Q02413 1049 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 TAF10Q12962 218 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 FASTKD3Q14CZ7 662 aaKnown RBP11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 FNBP1LQ5T0N5 605 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 MANEALQ5VSG8 457 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 KIAA1841Q6NSI8 718 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 ZBED8Q8IZ13 594 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 PDIK1LQ8N165 341 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 TAB3Q8N5C8 712 aaPredicted RBP11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 CCDC33Q8N5R6 958 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 EPS8L3Q8TE67 593 aaKnown RBP11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 TMEM169Q96HH4 297 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 SPATA13Q96N96 652 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 SERPINB12Q96P63 405 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 TMEM106CQ9BVX2 250 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 TTLL2Q9BWV7 592 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 BRD8Q9H0E9 1235 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms