RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 SHROOM3Q8TF72 1996 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 ERICH4A6NGS2 130 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 KCNN4O15554 427 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 CTSAP10619 480 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 HMGA1P17096 107 aaKnown RBP12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 ERCC2P18074 760 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 ITIH2P19823 946 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 CTNNB1P35222 781 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 RPL22P35268 128 aaKnown RBP12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 CHKAP35790 457 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 ALDH1A3P47895 512 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 ERVFC1P60507 584 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 TWF1Q12792 350 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 UBAP2Q5T6F2 1119 aaKnown RBP12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 MSANTD2Q6P1R3 559 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 TMC3Q7Z5M5 1100 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 CCDC25Q86WR0 208 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.6□□□□□ -0.392e-6■■■■■ 53.5
SPTBN1-203ENST00000389980 ZNF512Q96ME7 567 aaPredicted RBP12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 TTLL2Q9BWV7 592 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 ADAM7Q9H2U9 754 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 USP29Q9HBJ7 922 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 PCDH9Q9HC56 1237 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 GEMIN8Q9NWZ8 242 aaKnown RBP12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 CLIC5Q9NZA1 410 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 ANAPC5Q9UJX4 755 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 ATP8A1Q9Y2Q0 1164 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 DCLK1O15075 740 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 TLR5O60602 858 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 CXCL14O95715 111 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 ZDHHC11BP0C7U3 371 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 ZFXP17010 805 aaPredicted RBP12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 EPHB2P29323 1055 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 ELF1P32519 619 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 TBX4P57082 545 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 PLD1Q13393 1074 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 UAP1Q16222 522 aaPredicted RBP12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 C9orf50Q5SZB4 431 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 FAM109BQ6ICB4 259 aaPredicted RBP12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 RWDD4Q6NW29 188 aaKnown RBP12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 SP7Q8TDD2 431 aaPredicted RBP12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 FCRL2Q96LA5 508 aaPredicted RBP12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 LGMNQ99538 433 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 LBHD1Q9BQE6 289 aaPredicted RBP12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 C17orf80Q9BSJ5 609 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 MARCH2Q9P0N8 246 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 TLR6Q9Y2C9 796 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 ANAPC1Q9H1A4 1944 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 REV3LO60673 3130 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 SLC12A8A0AV02 714 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 KCNU1A8MYU2 1149 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 SYF2O95926 243 aaKnown RBP12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 DNAJB1P25685 340 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 HSD17B3P37058 310 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 HSPA9P38646 679 aaKnown RBP12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 PSEN1P49768 467 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 HSP90B2PQ58FF3 399 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 BRMS1LQ5PSV4 323 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 SYCP2LQ5T4T6 812 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 RHBDF2Q6PJF5 856 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 C14orf80Q86SX3 495 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 NPWQ8N729 165 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 SLC39A13Q96H72 371 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 EPAS1Q99814 870 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 UBE2OQ9C0C9 1292 aaKnown RBP12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 COMMD8Q9NX08 183 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 INSL5Q9Y5Q6 135 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 HS3ST4Q9Y661 456 aa12.59□□□□□ -0.39
SPTBN1-203ENST00000389980 GBF1Q92538 1859 aa12.58□□□□□ -0.39
SPTBN1-203ENST00000389980 MYO9BQ13459 2157 aa12.58□□□□□ -0.4
SPTBN1-203ENST00000389980 LINC01553A4QN01 128 aa12.58□□□□□ -0.4
SPTBN1-203ENST00000389980 CARNS1A5YM72 827 aa12.58□□□□□ -0.4
SPTBN1-203ENST00000389980 HIDE1A8MVS5 230 aa12.58□□□□□ -0.4
SPTBN1-203ENST00000389980 DNALI1O14645 258 aaPredicted RBP12.58□□□□□ -0.4
SPTBN1-203ENST00000389980 TGM5O43548 720 aa12.58□□□□□ -0.4
SPTBN1-203ENST00000389980 BMPR1AP36894 532 aa12.58□□□□□ -0.4
SPTBN1-203ENST00000389980 NR2C2P49116 596 aa12.58□□□□□ -0.4
SPTBN1-203ENST00000389980 PPP2R5DQ14738 602 aa12.58□□□□□ -0.4
SPTBN1-203ENST00000389980 TAF12Q16514 161 aa12.58□□□□□ -0.4
SPTBN1-203ENST00000389980 ARTNQ5T4W7 220 aa12.58□□□□□ -0.4
SPTBN1-203ENST00000389980 PIK3R6Q5UE93 754 aa12.58□□□□□ -0.4
SPTBN1-203ENST00000389980 MREGQ8N565 214 aa12.58□□□□□ -0.4
SPTBN1-203ENST00000389980 UBLCP1Q8WVY7 318 aaPredicted RBP12.58□□□□□ -0.4
SPTBN1-203ENST00000389980 OLFM3Q96PB7 478 aa12.58□□□□□ -0.4
SPTBN1-203ENST00000389980 TCF25Q9BQ70 676 aa12.58□□□□□ -0.4
SPTBN1-203ENST00000389980 HTATIP2Q9BUP3 242 aa12.58□□□□□ -0.4
SPTBN1-203ENST00000389980 OSBPL2Q9H1P3 480 aa12.58□□□□□ -0.4
SPTBN1-203ENST00000389980 ACBD3Q9H3P7 528 aa12.58□□□□□ -0.4
SPTBN1-203ENST00000389980 VIPAS39Q9H9C1 493 aa12.58□□□□□ -0.4
SPTBN1-203ENST00000389980 RXFP1Q9HBX9 757 aa12.58□□□□□ -0.4
SPTBN1-203ENST00000389980 FNIP2Q9P278 1114 aa12.58□□□□□ -0.4
SPTBN1-203ENST00000389980 MTRF1LQ9UGC7 380 aaKnown RBP12.58□□□□□ -0.4
SPTBN1-203ENST00000389980 NEU3Q9UQ49 428 aa12.58□□□□□ -0.4
SPTBN1-203ENST00000389980 C5orf42Q9H799 3197 aa12.58□□□□□ -0.4
SPTBN1-203ENST00000389980 ZNF840PA6NDX5 716 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 AGPSO00116 658 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 CSH1P0DML2 217 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 CSH2P0DML3 217 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 STIP1P31948 543 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms