RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 IL18RAPO95256 599 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 NFKBIAP25963 317 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 PDK1Q15118 436 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 AMHR2Q16671 573 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 DACT2Q5SW24 774 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 CCDC103Q8IW40 242 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 JOSD2Q8TAC2 188 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 ZFAND2BQ8WV99 257 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 ACSS2Q9NR19 701 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 HBS1LQ9Y450 684 aaKnown RBP14.61□□□□□ -0.07
RTF1-201ENST00000389629 N4BP2Q86UW6 1770 aaPredicted RBP14.61□□□□□ -0.07
RTF1-201ENST00000389629 PLIN4Q96Q06 1357 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 A0A096LPK6 155 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 DFFAO00273 331 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 VDRP11473 427 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 MMP8P22894 467 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 POLD1P28340 1107 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 TCF7P36402 384 aaPredicted RBP14.61□□□□□ -0.07
RTF1-201ENST00000389629 CLK1P49759 484 aaKnown RBP14.61□□□□□ -0.07
RTF1-201ENST00000389629 MTTPP55157 894 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 BFSP2Q13515 415 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 STILQ15468 1287 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 OLFML1Q6UWY5 402 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 APBB2Q92870 758 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 RCN3Q96D15 328 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 GPAMQ9HCL2 828 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 TRPC7Q9HCX4 862 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 LNPEPQ9UIQ6 1025 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 CDH22Q9UJ99 828 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 SIGLEC16A6NMB1 481 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 CFAP99D6REC4 459 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 TRDMT1O14717 391 aaKnown RBP14.61□□□□□ -0.07
RTF1-201ENST00000389629 SUPT7LO94864 414 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 RARBP10826 455 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 EPHA3P29320 983 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 ABCE1P61221 599 aaKnown RBP14.61□□□□□ -0.07
RTF1-201ENST00000389629 GPR107Q5VW38 600 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 ANKS1BQ7Z6G8 1248 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 SAMD3Q8N6K7 520 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 COLGALT1Q8NBJ5 622 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 BSNDQ8WZ55 320 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 GLMNQ92990 594 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 SEPHS2Q99611 448 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 CCDC28BQ9BUN5 200 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 GPR88Q9GZN0 384 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 NACA2Q9H009 215 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 AAASQ9NRG9 546 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 UBIAD1Q9Y5Z9 338 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 NUP188Q5SRE5 1749 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 C3orf70A6NLC5 250 aaPredicted RBP14.61□□□□□ -0.07
RTF1-201ENST00000389629 SPDYE16A6NNV3 312 aaPredicted RBP14.61□□□□□ -0.07
RTF1-201ENST00000389629 EEF2KO00418 725 aaKnown RBP14.61□□□□□ -0.07
RTF1-201ENST00000389629 ERVK-10P10266 1014 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 MGAT5Q09328 741 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 SPDYE2Q495Y8 402 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 FAM131BQ86XD5 332 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 BRSK2Q8IWQ3 736 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 BORCS6Q96GS4 357 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 EIF2AQ9BY44 585 aaKnown RBP14.61□□□□□ -0.07
RTF1-201ENST00000389629 EPB41L4BQ9H329 900 aa14.61□□□□□ -0.07
RTF1-201ENST00000389629 SARS2Q9NP81 518 aaKnown RBP14.61□□□□□ -0.07
RTF1-201ENST00000389629 NR5A2O00482 541 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 UNGP13051 313 aaPredicted RBP14.6□□□□□ -0.07
RTF1-201ENST00000389629 HOXA10P31260 410 aaPredicted RBP14.6□□□□□ -0.07
RTF1-201ENST00000389629 WASHC5Q12768 1159 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 FAM83EQ2M2I3 478 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 SLC44A1Q8WWI5 657 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 SERAC1Q96JX3 654 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 ZNF395Q9H8N7 513 aaPredicted RBP14.6□□□□□ -0.07
RTF1-201ENST00000389629 CHADO15335 359 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 USP12O75317 370 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 MICAL2O94851 1124 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 PIGNO95427 931 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 ADSSP30520 456 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 ACTR3P61158 418 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 PTP4A2Q12974 167 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 EFCAB12Q6NXP0 572 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 MYO1HQ8N1T3 1032 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 ZBTB18Q99592 522 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 UBP1Q9NZI7 540 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 AP4E1Q9UPM8 1137 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 PLLPQ9Y342 182 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 RBMX2Q9Y388 322 aaKnown RBP14.6□□□□□ -0.07
RTF1-201ENST00000389629 PARP4Q9UKK3 1724 aaKnown RBP14.6□□□□□ -0.07
RTF1-201ENST00000389629 UBA6A0AVT1 1052 aaPredicted RBP14.6□□□□□ -0.07
RTF1-201ENST00000389629 A6NHS1 94 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 ZNF839A8K0R7 811 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 CDKN2BP42772 138 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 TATDN1Q6P1N9 297 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 EBF4Q9BQW3 602 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 SLC4A5Q9BY07 1137 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 UBE2OQ9C0C9 1292 aaKnown RBP14.6□□□□□ -0.07
RTF1-201ENST00000389629 C6orf203Q9P0P8 240 aaPredicted RBP14.6□□□□□ -0.07
RTF1-201ENST00000389629 TNFSF9P41273 254 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 NAGLUP54802 743 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 DLG1Q12959 904 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 MPP3Q13368 585 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 NR1D2Q14995 579 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 TAF5Q15542 800 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 UGP2Q16851 508 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms