RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 L3MBTL3Q96JM7 780 aaPredicted RBP16.52■□□□□ 0.24
PTPRN2-201ENST00000389413 CEP19Q96LK0 163 aa16.52■□□□□ 0.24
PTPRN2-201ENST00000389413 RUBCNLQ9H714 662 aa16.52■□□□□ 0.24
PTPRN2-201ENST00000389413 ANKRD6Q9Y2G4 727 aa16.52■□□□□ 0.24
PTPRN2-201ENST00000389413 GPR182O15218 404 aa16.52■□□□□ 0.23
PTPRN2-201ENST00000389413 PMM2O15305 246 aa16.52■□□□□ 0.23
PTPRN2-201ENST00000389413 USP12O75317 370 aa16.52■□□□□ 0.23
PTPRN2-201ENST00000389413 CYP1A1P04798 512 aaPredicted RBP16.52■□□□□ 0.23
PTPRN2-201ENST00000389413 HNRNPCP07910 306 aaKnown RBP eCLIP16.52■□□□□ 0.231e-6■■■■□ 21.8
PTPRN2-201ENST00000389413 DNAJB2P25686 324 aa16.52■□□□□ 0.23
PTPRN2-201ENST00000389413 INPP1P49441 399 aa16.52■□□□□ 0.23
PTPRN2-201ENST00000389413 POU4F1Q01851 419 aa16.52■□□□□ 0.23
PTPRN2-201ENST00000389413 EEF1DP3Q658K8 133 aa16.52■□□□□ 0.23
PTPRN2-201ENST00000389413 FITM2Q8N6M3 262 aa16.52■□□□□ 0.23
PTPRN2-201ENST00000389413 ACMSDQ8TDX5 336 aa16.52■□□□□ 0.23
PTPRN2-201ENST00000389413 USP13Q92995 863 aaPredicted RBP16.52■□□□□ 0.23
PTPRN2-201ENST00000389413 ZNF333Q96JL9 665 aa16.52■□□□□ 0.23
PTPRN2-201ENST00000389413 LRMDAQ9H2I8 198 aa16.52■□□□□ 0.23
PTPRN2-201ENST00000389413 PTRHD1Q6GMV3 140 aaKnown RBP16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 ECHDC2Q86YB7 292 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 DAW1Q8N136 415 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 SPDYE1Q8NFV5 336 aaPredicted RBP16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 RFWD2Q8NHY2 731 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 MIEF2Q96C03 454 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 OPTNQ96CV9 577 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 HSFY1Q96LI6 401 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 POPDC2Q9HBU9 364 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 TBC1D13Q9NVG8 400 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 SLC17A7Q9P2U7 560 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 MYPNQ86TC9 1320 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 HIST1H2AGP0C0S8 130 aaPredicted RBP16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 RAG1P15918 1043 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 HIST1H2ADP20671 130 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 CDC25CP30307 473 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 NOS2P35228 1153 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 TWF1Q12792 350 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 ACCSLQ4AC99 568 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 ZC3H12AQ5D1E8 599 aaKnown RBP16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 SCARA3Q6AZY7 606 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 IYDQ6PHW0 289 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 NET1Q7Z628 596 aaPredicted RBP16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 DEFB132Q7Z7B7 95 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 SLC22A9Q8IVM8 553 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 ADAM32Q8TC27 787 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 ZNF526Q8TF50 670 aaPredicted RBP16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 HIST1H2AHQ96KK5 128 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 HIST1H2AJQ99878 128 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 H2AFJQ9BTM1 129 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 MUC3BQ9H195 1237 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 CASS4Q9NQ75 786 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 PKP3Q9Y446 797 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 ERI2A8K979 691 aaKnown RBP16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 YY1P25490 414 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 CRABP2P29373 138 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 AXLP30530 894 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 ZRANB3Q5FWF4 1079 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 PIGWQ7Z7B1 504 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 APBA2Q99767 749 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 C2CD2Q9Y426 696 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 SCN11AQ9UI33 1791 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 TBC1D4O60343 1298 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 CLASP2O75122 1294 aaKnown RBP16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 WFS1O76024 890 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 VAPBO95292 243 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 MYL4P12829 197 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 CDKN2BP42772 138 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 SNX32Q86XE0 403 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 KAT2BQ92831 832 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 DSEQ9UL01 958 aa16.51■□□□□ 0.23
PTPRN2-201ENST00000389413 TMEM247A6NEH6 219 aa16.5■□□□□ 0.23
PTPRN2-201ENST00000389413 C5orf60A6NFR6 353 aa16.5■□□□□ 0.23
PTPRN2-201ENST00000389413 STX7O15400 261 aaKnown RBP16.5■□□□□ 0.23
PTPRN2-201ENST00000389413 B4GALT5O43286 388 aa16.5■□□□□ 0.23
PTPRN2-201ENST00000389413 STRNO43815 780 aa16.5■□□□□ 0.23
PTPRN2-201ENST00000389413 YBX3P16989 372 aaKnown RBP eCLIP16.5■□□□□ 0.236e-7■■■■■ 40.5
PTPRN2-201ENST00000389413 PSMB4P28070 264 aa16.5■□□□□ 0.23
PTPRN2-201ENST00000389413 CRADDP78560 199 aa16.5■□□□□ 0.23
PTPRN2-201ENST00000389413 SLC1A5Q15758 541 aa16.5■□□□□ 0.23
PTPRN2-201ENST00000389413 PAN2Q504Q3 1202 aaKnown RBP16.5■□□□□ 0.23
PTPRN2-201ENST00000389413 OLFML2BQ68BL8 750 aa16.5■□□□□ 0.23
PTPRN2-201ENST00000389413 NAIF1Q69YI7 327 aaPredicted RBP16.5■□□□□ 0.23
PTPRN2-201ENST00000389413 DNAJB3Q8WWF6 145 aa16.5■□□□□ 0.23
PTPRN2-201ENST00000389413 COPS5Q92905 334 aa16.5■□□□□ 0.23
PTPRN2-201ENST00000389413 WNT8BQ93098 351 aa16.5■□□□□ 0.23
PTPRN2-201ENST00000389413 PRKD2Q9BZL6 878 aa16.5■□□□□ 0.23
PTPRN2-201ENST00000389413 WRAP73Q9P2S5 460 aaPredicted RBP16.5■□□□□ 0.23
PTPRN2-201ENST00000389413 RNF112Q9ULX5 631 aa16.5■□□□□ 0.23
PTPRN2-201ENST00000389413 PRG3Q9Y2Y8 225 aaPredicted RBP16.5■□□□□ 0.23
PTPRN2-201ENST00000389413 TIMM13Q9Y5L4 95 aaPredicted RBP16.5■□□□□ 0.23
PTPRN2-201ENST00000389413 BIRC5O15392 142 aa16.5■□□□□ 0.23
PTPRN2-201ENST00000389413 AVILO75366 819 aa16.5■□□□□ 0.23
PTPRN2-201ENST00000389413 RECQL4O94761 1208 aa16.5■□□□□ 0.23
PTPRN2-201ENST00000389413 CST3P01034 146 aaPredicted RBP16.5■□□□□ 0.23
PTPRN2-201ENST00000389413 HARS2P49590 506 aaKnown RBP16.5■□□□□ 0.23
PTPRN2-201ENST00000389413 ENPEPQ07075 957 aa16.5■□□□□ 0.23
PTPRN2-201ENST00000389413 DCAF12L1Q5VU92 463 aa16.5■□□□□ 0.23
PTPRN2-201ENST00000389413 PSTKQ8IV42 348 aaKnown RBP16.5■□□□□ 0.23
PTPRN2-201ENST00000389413 KIAA0319LQ8IZA0 1049 aa16.5■□□□□ 0.23
PTPRN2-201ENST00000389413 FNIP1Q8TF40 1166 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms