RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 HEATR6Q6AI08 1181 aaKnown RBP10.49□□□□□ -0.73
LTN1-203ENST00000389195 CASC4Q6P4E1 433 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 VSTM1Q6UX27 236 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 CENPUQ71F23 418 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 STRADAQ7RTN6 431 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 THEM5Q8N1Q8 247 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 SLC43A3Q8NBI5 491 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 ATP2A3Q93084 1043 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 SLC2A13Q96QE2 648 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 PRDM5Q9NQX1 630 aaPredicted RBP10.49□□□□□ -0.73
LTN1-203ENST00000389195 PSD3Q9NYI0 1048 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 STAP1Q9ULZ2 295 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 DOCK6Q96HP0 2047 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 RNF103O00237 685 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 DFFAO00273 331 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 TRDMT1O14717 391 aaKnown RBP10.48□□□□□ -0.73
LTN1-203ENST00000389195 ALOX15BO15296 676 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 GJB3O75712 270 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 EIF3BP55884 814 aaKnown RBP10.48□□□□□ -0.73
LTN1-203ENST00000389195 TPI1P60174 286 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 EFEMP1Q12805 493 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 PPP2R5DQ14738 602 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 PLEKHG4Q58EX7 1191 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 ANKRD20A2Q5SQ80 823 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 ANKRD20A1Q5TYW2 823 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 ANKRD20A3Q5VUR7 823 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 CTAGE3PQ8IX95 158 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 TEKT4Q8WW24 435 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 MYEOVQ96EZ4 313 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 XPO6Q96QU8 1125 aaKnown RBP10.48□□□□□ -0.73
LTN1-203ENST00000389195 ATXN3LQ9H3M9 355 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 CNGB3Q9NQW8 809 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 GMIPQ9P107 970 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 RABGEF1Q9UJ41 708 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 FBXW11Q9UKB1 542 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 ADAM28Q9UKQ2 775 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 EFR3BQ9Y2G0 817 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 CDY1Q9Y6F8 540 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.48□□□□□ -0.73
LTN1-203ENST00000389195 TNFRSF10BO14763 440 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 VNN2O95498 520 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 ALDH2P05091 517 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 SNX16P57768 344 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 BMPR2Q13873 1038 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 KCNJ11Q14654 390 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 BTBD8Q5XKL5 378 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 PPP1R21Q6ZMI0 780 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 OTOP3Q7RTS5 596 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 PID1Q7Z2X4 250 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 PDIK1LQ8N165 341 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 COLGALT1Q8NBJ5 622 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 URGCPQ8TCY9 931 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 TFB1MQ8WVM0 346 aaKnown RBP10.48□□□□□ -0.73
LTN1-203ENST00000389195 HTR3CQ8WXA8 447 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 CSNK1G1Q9HCP0 422 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 SMYD2Q9NRG4 433 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 ACTL7AQ9Y615 435 aa10.48□□□□□ -0.73
LTN1-203ENST00000389195 TCRBV9S1A1TA0A576 114 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 PAGE1O75459 146 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 CA8P35219 290 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 MNX1P50219 401 aaPredicted RBP10.47□□□□□ -0.73
LTN1-203ENST00000389195 ARL4CP56559 192 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 FAM189BP81408 668 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 ZBTB17Q13105 803 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 SLC45A4Q5BKX6 768 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 AGBL2Q5U5Z8 902 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 RASIP1Q5U651 963 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 ARHGEF18Q6ZSZ5 1173 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 ZNF534Q76KX8 674 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 NLRP14Q86W24 1093 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 ZNF567Q8N184 647 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 SPATA22Q8NHS9 363 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 BHMTQ93088 406 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 VWCEQ96DN2 955 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 PGM2Q96G03 612 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 ATXN7L3BQ96GX2 97 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 INTS9Q9NV88 658 aaKnown RBP10.47□□□□□ -0.73
LTN1-203ENST00000389195 GRID1Q9ULK0 1009 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 VANGL2Q9ULK5 521 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 PHF24Q9UPV7 400 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 GOLGA6L7A0A1B0GV03 622 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 TRIM66O15016 1216 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 EOMESO95936 686 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 CYP11A1P05108 521 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 STIP1P31948 543 aaKnown RBP10.47□□□□□ -0.73
LTN1-203ENST00000389195 GBP1P32455 592 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 RPA3P35244 121 aaPredicted RBP10.47□□□□□ -0.73
LTN1-203ENST00000389195 MMP13P45452 471 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 DEFB103AP81534 67 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 WASHC5Q12768 1159 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 SPOUT1Q5T280 376 aaKnown RBP10.47□□□□□ -0.73
LTN1-203ENST00000389195 PPM1NQ8N819 430 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 DYDC1Q8WWB3 177 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 CCSER2Q9H7U1 834 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 SHOC2Q9UQ13 582 aa10.47□□□□□ -0.73
LTN1-203ENST00000389195 WDR27A2RRH5 827 aa10.46□□□□□ -0.73
LTN1-203ENST00000389195 ZBTB24O43167 697 aaPredicted RBP10.46□□□□□ -0.73
LTN1-203ENST00000389195 MT-CYBP00156 380 aaPredicted RBP10.46□□□□□ -0.73
LTN1-203ENST00000389195 GALTP07902 379 aa10.46□□□□□ -0.73
LTN1-203ENST00000389195 VIMP08670 466 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms