RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 ZC3H18Q86VM9 953 aaKnown RBP27.73■■■□□ 2.03
MSX1-201ENST00000382723 DDX42Q86XP3 938 aaKnown RBP eCLIP27.73■■■□□ 2.03
MSX1-201ENST00000382723 HS6ST3Q8IZP7 471 aa27.73■■■□□ 2.03
MSX1-201ENST00000382723 SLCO2A1Q92959 643 aa27.73■■■□□ 2.03
MSX1-201ENST00000382723 NKD2Q969F2 451 aaPredicted RBP27.73■■■□□ 2.03
MSX1-201ENST00000382723 TMEM121Q9BTD3 319 aa27.73■■■□□ 2.03
MSX1-201ENST00000382723 MAN1C1Q9NR34 630 aa27.73■■■□□ 2.03
MSX1-201ENST00000382723 LRIG2O94898 1065 aa27.73■■■□□ 2.03
MSX1-201ENST00000382723 F11P03951 625 aa27.73■■■□□ 2.03
MSX1-201ENST00000382723 EPCAMP16422 314 aa27.73■■■□□ 2.03
MSX1-201ENST00000382723 PPP3CCP48454 512 aa27.73■■■□□ 2.03
MSX1-201ENST00000382723 GBE1Q04446 702 aa27.73■■■□□ 2.03
MSX1-201ENST00000382723 NOMO1Q15155 1222 aa27.73■■■□□ 2.03
MSX1-201ENST00000382723 OASLQ15646 514 aaKnown RBP27.73■■■□□ 2.03
MSX1-201ENST00000382723 RAB30Q15771 203 aa27.73■■■□□ 2.03
MSX1-201ENST00000382723 ZNF276Q8N554 614 aa27.73■■■□□ 2.03
MSX1-201ENST00000382723 TMEM51Q9NW97 253 aa27.73■■■□□ 2.03
MSX1-201ENST00000382723 GAS8O95995 478 aa27.72■■■□□ 2.03
MSX1-201ENST00000382723 MYBL2P10244 700 aa27.72■■■□□ 2.03
MSX1-201ENST00000382723 CARSP49589 748 aaKnown RBP27.72■■■□□ 2.03
MSX1-201ENST00000382723 BRD3Q15059 726 aa27.72■■■□□ 2.03
MSX1-201ENST00000382723 CCNI2Q6ZMN8 369 aaPredicted RBP27.72■■■□□ 2.03
MSX1-201ENST00000382723 CCDC33Q8N5R6 958 aa27.72■■■□□ 2.03
MSX1-201ENST00000382723 IL21Q9HBE4 155 aa27.72■■■□□ 2.03
MSX1-201ENST00000382723 TRPC7Q9HCX4 862 aa27.72■■■□□ 2.03
MSX1-201ENST00000382723 DRG1Q9Y295 367 aaKnown RBP27.72■■■□□ 2.03
MSX1-201ENST00000382723 HS3ST4Q9Y661 456 aa27.72■■■□□ 2.03
MSX1-201ENST00000382723 RFPL2O75678 378 aa27.71■■■□□ 2.03
MSX1-201ENST00000382723 EPHB2P29323 1055 aa27.71■■■□□ 2.03
MSX1-201ENST00000382723 LMNB2Q03252 620 aa27.71■■■□□ 2.03
MSX1-201ENST00000382723 PDE12Q6L8Q7 609 aaKnown RBP27.71■■■□□ 2.03
MSX1-201ENST00000382723 RWDD4Q6NW29 188 aaKnown RBP27.71■■■□□ 2.03
MSX1-201ENST00000382723 PRUNE1Q86TP1 453 aa27.71■■■□□ 2.03
MSX1-201ENST00000382723 SLC12A6Q9UHW9 1150 aa27.71■■■□□ 2.03
MSX1-201ENST00000382723 ITGAVP06756 1048 aa27.71■■■□□ 2.03
MSX1-201ENST00000382723 RBP3P10745 1247 aa27.71■■■□□ 2.03
MSX1-201ENST00000382723 ERCC2P18074 760 aa27.71■■■□□ 2.03
MSX1-201ENST00000382723 GABRR2P28476 465 aa27.71■■■□□ 2.03
MSX1-201ENST00000382723 HCAR3P49019 387 aa27.71■■■□□ 2.03
MSX1-201ENST00000382723 KCNQ1P51787 676 aa27.71■■■□□ 2.03
MSX1-201ENST00000382723 CLCN6P51797 869 aa27.71■■■□□ 2.03
MSX1-201ENST00000382723 SLC10A2Q12908 348 aaPredicted RBP27.71■■■□□ 2.03
MSX1-201ENST00000382723 PABPC1LQ4VXU2 614 aaKnown RBP27.71■■■□□ 2.03
MSX1-201ENST00000382723 ATP6V0D2Q8N8Y2 350 aa27.71■■■□□ 2.03
MSX1-201ENST00000382723 GDPD5Q8WTR4 605 aa27.71■■■□□ 2.03
MSX1-201ENST00000382723 CORO1BQ9BR76 489 aa27.71■■■□□ 2.03
MSX1-201ENST00000382723 RNF38Q9H0F5 515 aa27.71■■■□□ 2.03
MSX1-201ENST00000382723 SLC28A3Q9HAS3 691 aa27.71■■■□□ 2.03
MSX1-201ENST00000382723 HBS1LQ9Y450 684 aaKnown RBP27.71■■■□□ 2.03
MSX1-201ENST00000382723 H7C0C1 242 aa27.7■■■□□ 2.02
MSX1-201ENST00000382723 SGK1O00141 431 aa27.7■■■□□ 2.02
MSX1-201ENST00000382723 IGLV3-27P01718 113 aa27.7■■■□□ 2.02
MSX1-201ENST00000382723 ATP5OP48047 213 aa27.7■■■□□ 2.02
MSX1-201ENST00000382723 KPNA1P52294 538 aaPredicted RBP27.7■■■□□ 2.02
MSX1-201ENST00000382723 PIK3R6Q5UE93 754 aa27.7■■■□□ 2.02
MSX1-201ENST00000382723 DUPD1Q68J44 220 aa27.7■■■□□ 2.02
MSX1-201ENST00000382723 DARS2Q6PI48 645 aaKnown RBP27.7■■■□□ 2.02
MSX1-201ENST00000382723 NETO2Q8NC67 525 aa27.7■■■□□ 2.02
MSX1-201ENST00000382723 LRRN4Q8WUT4 740 aa27.7■■■□□ 2.02
MSX1-201ENST00000382723 SNX24Q9Y343 169 aa27.7■■■□□ 2.02
MSX1-201ENST00000382723 CCDC151A5D8V7 595 aa27.69■■■□□ 2.02
MSX1-201ENST00000382723 OAS1P00973 400 aaKnown RBP27.69■■■□□ 2.02
MSX1-201ENST00000382723 VPS41P49754 854 aa27.69■■■□□ 2.02
MSX1-201ENST00000382723 TUBP50607 506 aa27.69■■■□□ 2.02
MSX1-201ENST00000382723 ZNF135P52742 658 aaPredicted RBP27.69■■■□□ 2.02
MSX1-201ENST00000382723 KLHDC10Q6PID8 442 aa27.69■■■□□ 2.02
MSX1-201ENST00000382723 ADGRD2Q7Z7M1 963 aa27.69■■■□□ 2.02
MSX1-201ENST00000382723 TMC8Q8IU68 726 aa27.69■■■□□ 2.02
MSX1-201ENST00000382723 ALLCQ8N6M5 410 aa27.69■■■□□ 2.02
MSX1-201ENST00000382723 BTN2A3PQ96KV6 586 aa27.69■■■□□ 2.02
MSX1-201ENST00000382723 DTLQ9NZJ0 730 aa27.69■■■□□ 2.02
MSX1-201ENST00000382723 ASIC3Q9UHC3 531 aa27.69■■■□□ 2.02
MSX1-201ENST00000382723 NFU1Q9UMS0 254 aa27.69■■■□□ 2.02
MSX1-201ENST00000382723 BHMG1C9JSJ3 638 aaPredicted RBP27.69■■■□□ 2.02
MSX1-201ENST00000382723 DCLK1O15075 740 aa27.69■■■□□ 2.02
MSX1-201ENST00000382723 MFSD11O43934 449 aa27.69■■■□□ 2.02
MSX1-201ENST00000382723 CYP4F8P98187 520 aa27.69■■■□□ 2.02
MSX1-201ENST00000382723 RING1Q06587 406 aa27.69■■■□□ 2.02
MSX1-201ENST00000382723 TXNDC8Q6A555 127 aa27.69■■■□□ 2.02
MSX1-201ENST00000382723 TMCO3Q6UWJ1 677 aa27.69■■■□□ 2.02
MSX1-201ENST00000382723 SYDE1Q6ZW31 735 aaPredicted RBP27.69■■■□□ 2.02
MSX1-201ENST00000382723 GAREM2Q75VX8 874 aa27.69■■■□□ 2.02
MSX1-201ENST00000382723 C14orf80Q86SX3 495 aa27.69■■■□□ 2.02
MSX1-201ENST00000382723 CYP2S1Q96SQ9 504 aa27.69■■■□□ 2.02
MSX1-201ENST00000382723 LRRC3Q9BY71 257 aa27.69■■■□□ 2.02
MSX1-201ENST00000382723 PRDM16Q9HAZ2 1276 aa27.69■■■□□ 2.02
MSX1-201ENST00000382723 HCFC1R1Q9NWW0 138 aa27.69■■■□□ 2.02
MSX1-201ENST00000382723 LAMA3Q16787 3333 aa27.68■■■□□ 2.02
MSX1-201ENST00000382723 ERLIN1O75477 346 aa27.68■■■□□ 2.02
MSX1-201ENST00000382723 IFNB1P01574 187 aa27.68■■■□□ 2.02
MSX1-201ENST00000382723 KRT14P02533 472 aa27.68■■■□□ 2.02
MSX1-201ENST00000382723 MYL4P12829 197 aa27.68■■■□□ 2.02
MSX1-201ENST00000382723 NR2C2P49116 596 aa27.68■■■□□ 2.02
MSX1-201ENST00000382723 MLLT6P55198 1093 aaPredicted RBP27.68■■■□□ 2.02
MSX1-201ENST00000382723 PTK6Q13882 451 aa27.68■■■□□ 2.02
MSX1-201ENST00000382723 HLTFQ14527 1009 aaKnown RBP eCLIP27.68■■■□□ 2.02
MSX1-201ENST00000382723 GLIS1Q8NBF1 620 aa27.68■■■□□ 2.02
MSX1-201ENST00000382723 RSAD2Q8WXG1 361 aa27.68■■■□□ 2.02
MSX1-201ENST00000382723 ASAH2Q9NR71 780 aa27.68■■■□□ 2.02
MSX1-201ENST00000382723 GKN1Q9NS71 199 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms