RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 HESX1Q9UBX0 185 aa16.7■□□□□ 0.26
VCX3A-201ENST00000381089 CLEC4EQ9ULY5 219 aa16.7■□□□□ 0.26
VCX3A-201ENST00000381089 ANKRD6Q9Y2G4 727 aa16.7■□□□□ 0.26
VCX3A-201ENST00000381089 RAXQ9Y2V3 346 aa16.7■□□□□ 0.26
VCX3A-201ENST00000381089 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.7■□□□□ 0.26
VCX3A-201ENST00000381089 PTPRBP23467 1997 aa16.69■□□□□ 0.26
VCX3A-201ENST00000381089 A0A1B0GVL5 298 aa16.69■□□□□ 0.26
VCX3A-201ENST00000381089 TNFSF14O43557 240 aa16.69■□□□□ 0.26
VCX3A-201ENST00000381089 RHOBTB3O94955 611 aa16.69■□□□□ 0.26
VCX3A-201ENST00000381089 LATS1O95835 1130 aa16.69■□□□□ 0.26
VCX3A-201ENST00000381089 ATXN1LP0C7T5 689 aaKnown RBP16.69■□□□□ 0.26
VCX3A-201ENST00000381089 CMA1P23946 247 aa16.69■□□□□ 0.26
VCX3A-201ENST00000381089 HOXD9P28356 352 aaPredicted RBP16.69■□□□□ 0.26
VCX3A-201ENST00000381089 ACSL1P33121 698 aa16.69■□□□□ 0.26
VCX3A-201ENST00000381089 BCAT1P54687 386 aa16.69■□□□□ 0.26
VCX3A-201ENST00000381089 DNM1Q05193 864 aaKnown RBP16.69■□□□□ 0.26
VCX3A-201ENST00000381089 SFSWAPQ12872 951 aaKnown RBP16.69■□□□□ 0.26
VCX3A-201ENST00000381089 PM20D1Q6GTS8 502 aa16.69■□□□□ 0.26
VCX3A-201ENST00000381089 HNRNPLLQ8WVV9 542 aaKnown RBP16.69■□□□□ 0.26
VCX3A-201ENST00000381089 ULBP1Q9BZM6 244 aa16.69■□□□□ 0.26
VCX3A-201ENST00000381089 TMEM245Q9H330 911 aa16.69■□□□□ 0.26
VCX3A-201ENST00000381089 SGK2Q9HBY8 427 aa16.69■□□□□ 0.26
VCX3A-201ENST00000381089 TM9SF3Q9HD45 589 aa16.69■□□□□ 0.26
VCX3A-201ENST00000381089 RAB20Q9NX57 234 aa16.69■□□□□ 0.26
VCX3A-201ENST00000381089 SUN2Q9UH99 717 aa16.69■□□□□ 0.26
VCX3A-201ENST00000381089 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.69■□□□□ 0.26
VCX3A-201ENST00000381089 NCKAP1Q9Y2A7 1128 aa16.69■□□□□ 0.26
VCX3A-201ENST00000381089 SNX11Q9Y5W9 270 aa16.69■□□□□ 0.26
VCX3A-201ENST00000381089 APC2O95996 2303 aa16.68■□□□□ 0.26
VCX3A-201ENST00000381089 XPO1O14980 1071 aaKnown RBP16.68■□□□□ 0.26
VCX3A-201ENST00000381089 DFNA5O60443 496 aa16.68■□□□□ 0.26
VCX3A-201ENST00000381089 TSPAN3O60637 253 aa16.68■□□□□ 0.26
VCX3A-201ENST00000381089 DKK1O94907 266 aa16.68■□□□□ 0.26
VCX3A-201ENST00000381089 FSBPO95073 299 aa16.68■□□□□ 0.26
VCX3A-201ENST00000381089 CD27P26842 260 aa16.68■□□□□ 0.26
VCX3A-201ENST00000381089 HLA-FP30511 346 aa16.68■□□□□ 0.26
VCX3A-201ENST00000381089 RAD23BP54727 409 aa16.68■□□□□ 0.26
VCX3A-201ENST00000381089 YWHAEP62258 255 aaKnown RBP16.68■□□□□ 0.26
VCX3A-201ENST00000381089 GOLGA7BQ2TAP0 167 aa16.68■□□□□ 0.26
VCX3A-201ENST00000381089 ADGRF1Q5T601 910 aa16.68■□□□□ 0.26
VCX3A-201ENST00000381089 SIX6OS1Q8N1H7 587 aa16.68■□□□□ 0.26
VCX3A-201ENST00000381089 GUF1Q8N442 669 aaKnown RBP16.68■□□□□ 0.26
VCX3A-201ENST00000381089 CYB5D2Q8WUJ1 264 aa16.68■□□□□ 0.26
VCX3A-201ENST00000381089 SKA1Q96BD8 255 aa16.68■□□□□ 0.26
VCX3A-201ENST00000381089 ABCB8Q9NUT2 735 aa16.68■□□□□ 0.26
VCX3A-201ENST00000381089 TOR4AQ9NXH8 423 aa16.68■□□□□ 0.26
VCX3A-201ENST00000381089 GGA2Q9UJY4 613 aa16.68■□□□□ 0.26
VCX3A-201ENST00000381089 CABIN1Q9Y6J0 2220 aa16.68■□□□□ 0.26
VCX3A-201ENST00000381089 KNL1Q8NG31 2342 aa16.67■□□□□ 0.26
VCX3A-201ENST00000381089 PCDHGA12O60330 932 aa16.67■□□□□ 0.26
VCX3A-201ENST00000381089 DLDP09622 509 aaKnown RBP16.67■□□□□ 0.26
VCX3A-201ENST00000381089 EPB41P11171 864 aaKnown RBP16.67■□□□□ 0.26
VCX3A-201ENST00000381089 PABPC1P11940 636 aaKnown RBP16.67■□□□□ 0.26
VCX3A-201ENST00000381089 POLR2EP19388 210 aaKnown RBP16.67■□□□□ 0.26
VCX3A-201ENST00000381089 SYKP43405 635 aa16.67■□□□□ 0.26
VCX3A-201ENST00000381089 C21orf59P57076 290 aa16.67■□□□□ 0.26
VCX3A-201ENST00000381089 BST2Q10589 180 aaKnown RBP16.67■□□□□ 0.26
VCX3A-201ENST00000381089 SOWAHCQ53LP3 525 aaPredicted RBP16.67■□□□□ 0.26
VCX3A-201ENST00000381089 SGO2Q562F6 1265 aa16.67■□□□□ 0.26
VCX3A-201ENST00000381089 ZNF776Q68DI1 518 aaPredicted RBP16.67■□□□□ 0.26
VCX3A-201ENST00000381089 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.67■□□□□ 0.26
VCX3A-201ENST00000381089 BIRC7Q96CA5 298 aa16.67■□□□□ 0.26
VCX3A-201ENST00000381089 IRX2Q9BZI1 471 aaPredicted RBP16.67■□□□□ 0.26
VCX3A-201ENST00000381089 ABCC13Q9NSE7 274 aa16.67■□□□□ 0.26
VCX3A-201ENST00000381089 STOML2Q9UJZ1 356 aa16.67■□□□□ 0.26
VCX3A-201ENST00000381089 TSPAN16Q9UKR8 245 aa16.67■□□□□ 0.26
VCX3A-201ENST00000381089 SCML1Q9UN30 329 aa16.67■□□□□ 0.26
VCX3A-201ENST00000381089 MAPK8IP1Q9UQF2 711 aa16.67■□□□□ 0.26
VCX3A-201ENST00000381089 TYW5A2RUC4 315 aaKnown RBP16.66■□□□□ 0.26
VCX3A-201ENST00000381089 E9PAM4 449 aa16.66■□□□□ 0.26
VCX3A-201ENST00000381089 RNASEH1O60930 286 aaKnown RBP16.66■□□□□ 0.26
VCX3A-201ENST00000381089 C7P10643 843 aa16.66■□□□□ 0.26
VCX3A-201ENST00000381089 SLC11A2P49281 568 aa16.66■□□□□ 0.26
VCX3A-201ENST00000381089 ST8SIA6P61647 398 aa16.66■□□□□ 0.26
VCX3A-201ENST00000381089 RPS14P62263 151 aaKnown RBP16.66■□□□□ 0.26
VCX3A-201ENST00000381089 ADIGQ0VDE8 80 aa16.66■□□□□ 0.26
VCX3A-201ENST00000381089 EDRF1Q3B7T1 1238 aa16.66■□□□□ 0.26
VCX3A-201ENST00000381089 CCDC157Q569K6 752 aa16.66■□□□□ 0.26
VCX3A-201ENST00000381089 BSPRYQ5W0U4 402 aa16.66■□□□□ 0.26
VCX3A-201ENST00000381089 MBLAC2Q68D91 279 aa16.66■□□□□ 0.26
VCX3A-201ENST00000381089 ADIPOR2Q86V24 386 aa16.66■□□□□ 0.26
VCX3A-201ENST00000381089 CCDC117Q8IWD4 279 aaPredicted RBP16.66■□□□□ 0.26
VCX3A-201ENST00000381089 UNC45BQ8IWX7 931 aa16.66■□□□□ 0.26
VCX3A-201ENST00000381089 ZNF366Q8N895 744 aa16.66■□□□□ 0.26
VCX3A-201ENST00000381089 PDCD7Q8N8D1 485 aaKnown RBP16.66■□□□□ 0.26
VCX3A-201ENST00000381089 GANCQ8TET4 914 aa16.66■□□□□ 0.26
VCX3A-201ENST00000381089 SEMA4DQ92854 862 aa16.66■□□□□ 0.26
VCX3A-201ENST00000381089 CCDC34Q96HJ3 373 aa16.66■□□□□ 0.26
VCX3A-201ENST00000381089 LRIG1Q96JA1 1093 aa16.66■□□□□ 0.26
VCX3A-201ENST00000381089 ACE2Q9BYF1 805 aaPredicted RBP16.66■□□□□ 0.26
VCX3A-201ENST00000381089 PRSS16Q9NQE7 514 aa16.66■□□□□ 0.26
VCX3A-201ENST00000381089 FTSJ1Q9UET6 329 aa16.66■□□□□ 0.26
VCX3A-201ENST00000381089 SFMBT1Q9UHJ3 866 aa16.66■□□□□ 0.26
VCX3A-201ENST00000381089 HPSEQ9Y251 543 aa16.66■□□□□ 0.26
VCX3A-201ENST00000381089 BTBD3Q9Y2F9 522 aa16.66■□□□□ 0.26
VCX3A-201ENST00000381089 GOLGA4Q13439 2230 aaKnown RBP16.66■□□□□ 0.26
VCX3A-201ENST00000381089 URB1O60287 2271 aaKnown RBP16.66■□□□□ 0.26
VCX3A-201ENST00000381089 TRABD2BA6NFA1 517 aa16.65■□□□□ 0.26
VCX3A-201ENST00000381089 CETN3O15182 167 aa16.65■□□□□ 0.26
VCX3A-201ENST00000381089 IRAK2O43187 625 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms