RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 MAGEC1O60732 1142 aa16.77■□□□□ 0.27
NKX3-1-201ENST00000380871 GSRP00390 522 aa16.77■□□□□ 0.27
NKX3-1-201ENST00000380871 MYL3P08590 195 aa16.77■□□□□ 0.27
NKX3-1-201ENST00000380871 PAPOLAP51003 745 aaKnown RBP16.77■□□□□ 0.27
NKX3-1-201ENST00000380871 DGKDQ16760 1214 aa16.77■□□□□ 0.27
NKX3-1-201ENST00000380871 FAM91A1Q658Y4 838 aa16.77■□□□□ 0.27
NKX3-1-201ENST00000380871 RSPH3Q86UC2 560 aa16.77■□□□□ 0.27
NKX3-1-201ENST00000380871 DEPDC1BQ8WUY9 529 aa16.77■□□□□ 0.27
NKX3-1-201ENST00000380871 VCXQ9H320 206 aa16.77■□□□□ 0.27
NKX3-1-201ENST00000380871 HESX1Q9UBX0 185 aa16.77■□□□□ 0.27
NKX3-1-201ENST00000380871 STX3Q13277 289 aa16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 MTBPQ96DY7 904 aa16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 CEP41Q9BYV8 373 aa16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 XAB2Q9HCS7 855 aaKnown RBP16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 PDE5AO76074 875 aa16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 RECQL4O94761 1208 aa16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 CELF2O95319 508 aaKnown RBP16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 POLE2P56282 527 aa16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 ACTR3P61158 418 aa16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 FASTKD1Q53R41 847 aaKnown RBP16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 VWA5B1Q5TIE3 1220 aa16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 DENND5BQ6ZUT9 1274 aa16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 TTC30AQ86WT1 665 aa16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 MYLK4Q86YV6 388 aaPredicted RBP16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 ARHGAP24Q8N264 748 aa16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 CCDC124Q96CT7 223 aaKnown RBP16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 MS4A4AQ96JQ5 239 aa16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 EMCNQ9ULC0 261 aa16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 DNAJC16Q9Y2G8 782 aa16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 AP1G2O75843 785 aa16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 KRT38O76015 456 aa16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 LMO2P25791 158 aa16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 ARRB2P32121 409 aa16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 BSPRYQ5W0U4 402 aa16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 HIPK4Q8NE63 616 aa16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 SHCBP1Q8NEM2 672 aa16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 PPP1R14CQ8TAE6 165 aa16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 FAM149B1Q96BN6 582 aa16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 TUBGCP5Q96RT8 1024 aa16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 GCOM2Q9BZD3 368 aaPredicted RBP16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 PSAT1Q9Y617 370 aa16.76■□□□□ 0.27
NKX3-1-201ENST00000380871 WDR27A2RRH5 827 aa16.75■□□□□ 0.27
NKX3-1-201ENST00000380871 AHCYL1O43865 530 aa16.75■□□□□ 0.27
NKX3-1-201ENST00000380871 ACAT1P24752 427 aaKnown RBP16.75■□□□□ 0.27
NKX3-1-201ENST00000380871 CPOXP36551 454 aa16.75■□□□□ 0.27
NKX3-1-201ENST00000380871 CCL14Q16627 93 aa16.75■□□□□ 0.27
NKX3-1-201ENST00000380871 CASC4Q6P4E1 433 aa16.75■□□□□ 0.27
NKX3-1-201ENST00000380871 RNF111Q6ZNA4 994 aa16.75■□□□□ 0.27
NKX3-1-201ENST00000380871 NET1Q7Z628 596 aaPredicted RBP16.75■□□□□ 0.27
NKX3-1-201ENST00000380871 GSDMBQ8TAX9 411 aa16.75■□□□□ 0.27
NKX3-1-201ENST00000380871 ZC3H15Q8WU90 426 aaKnown RBP16.75■□□□□ 0.27
NKX3-1-201ENST00000380871 RTP4Q96DX8 246 aa16.75■□□□□ 0.27
NKX3-1-201ENST00000380871 NDE1Q9NXR1 346 aa16.75■□□□□ 0.27
NKX3-1-201ENST00000380871 BPTFQ12830 3046 aa16.75■□□□□ 0.27
NKX3-1-201ENST00000380871 A0A088AWK7 358 aa16.75■□□□□ 0.27
NKX3-1-201ENST00000380871 ARHGAP42A6NI28 874 aa16.75■□□□□ 0.27
NKX3-1-201ENST00000380871 FAM159BA6NKW6 160 aa16.75■□□□□ 0.27
NKX3-1-201ENST00000380871 CIB2O75838 187 aa16.75■□□□□ 0.27
NKX3-1-201ENST00000380871 EPHB1P54762 984 aa16.75■□□□□ 0.27
NKX3-1-201ENST00000380871 CDC16Q13042 620 aa16.75■□□□□ 0.27
NKX3-1-201ENST00000380871 MAVSQ7Z434 540 aa16.75■□□□□ 0.27
NKX3-1-201ENST00000380871 PLEKHH3Q7Z736 793 aa16.75■□□□□ 0.27
NKX3-1-201ENST00000380871 EBNA1BP2Q99848 306 aaKnown RBP16.75■□□□□ 0.27
NKX3-1-201ENST00000380871 PTPN18Q99952 460 aa16.75■□□□□ 0.27
NKX3-1-201ENST00000380871 ZCWPW1Q9H0M4 648 aa16.75■□□□□ 0.27
NKX3-1-201ENST00000380871 DHX35Q9H5Z1 703 aaKnown RBP16.75■□□□□ 0.27
NKX3-1-201ENST00000380871 GLTPD2A6NH11 291 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 SDR42E2A6NKP2 422 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 CLGNO14967 610 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 ZMPSTE24O75844 475 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 GABBR2O75899 941 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 ALDOAP04075 364 aaKnown RBP16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 IGFBP6P24592 240 aaPredicted RBP16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 CYP2F1P24903 491 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 HOXA11P31270 313 aaPredicted RBP16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 TUBB3Q13509 450 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 ACAP1Q15027 740 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 DUSP28Q4G0W2 176 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 CYP4F11Q9HBI6 524 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 ANGPTL2Q9UKU9 493 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 NME7Q9Y5B8 376 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 OTOFQ9HC10 1997 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 SMIM10L2AP0DMW4 78 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 SMIM10L2BP0DMW5 78 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 SDC4P31431 198 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 CRHR1P34998 444 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 MAGEA3P43357 314 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 HDAC4P56524 1084 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 TRMT5Q32P41 509 aaKnown RBP16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 C11orf91Q3C1V1 193 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 PPM1JQ5JR12 505 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 LGSNQ5TDP6 509 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 SLC9A4Q6AI14 798 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 TMEM40Q8WWA1 233 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 KHSRPQ92945 711 aaKnown RBP eCLIP16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 ECSITQ9BQ95 431 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 CYP3A43Q9HB55 503 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 BCLAF3A2AJT9 711 aaKnown RBP16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 TRDMT1O14717 391 aaKnown RBP16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 TPP1O14773 563 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 276.1 ms