RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 TDRKHQ9Y2W6 561 aaKnown RBP6.74□□□□□ -1.33
NEDD9-202ENST00000379446 USP54Q70EL1 1684 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 CYP26A1O43174 497 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 ATP9BO43861 1147 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 ARIH2O95376 493 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 ZNF865P0CJ78 1059 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-202ENST00000379446 MX2P20592 715 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 SCNN1AP37088 669 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 DUSP3P51452 185 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-202ENST00000379446 NDST1P52848 882 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 IRX1P78414 480 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-202ENST00000379446 IL1RL1Q01638 556 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 UBE3AQ05086 875 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 TRADDQ15628 312 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 SLC18A3Q16572 532 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 ZNF438Q7Z4V0 828 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 LONP2Q86WA8 852 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 FAM131BQ86XD5 332 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 KLHL29Q96CT2 875 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 CLIP3Q96DZ5 547 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 TRIM7Q9C029 511 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 CDT1Q9H211 546 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 DNAJC18Q9H819 358 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 TDP1Q9NUW8 608 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 YIPF1Q9Y548 306 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 BAZ2AQ9UIF9 1905 aaKnown RBP6.74□□□□□ -1.33
NEDD9-202ENST00000379446 A0A0U1RQF3 1178 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 SMIM28A0A1B0GU29 152 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 FGGP02679 453 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 SOD2P04179 222 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 NFICP08651 508 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 KRT15P19012 456 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 ITGAXP20702 1163 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 NTHL1P78549 312 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 BCL2L1Q07817 233 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 FAAP100Q0VG06 881 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 CAPSQ13938 189 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 ECM1Q16610 540 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 RAP1GAP2Q684P5 730 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 TXNDC8Q6A555 127 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 ENOSF1Q7L5Y1 443 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 PARGQ86W56 976 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 B3GALNT2Q8NCR0 500 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 BLOC1S5Q8TDH9 187 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 CASKIN2Q8WXE0 1202 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 P3H4Q92791 437 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 HHIPQ96QV1 700 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 CBWD1Q9BRT8 395 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 EIF2AQ9BY44 585 aaKnown RBP6.73□□□□□ -1.33
NEDD9-202ENST00000379446 TRIM4Q9C037 500 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 FAM117AQ9C073 453 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 FLRT1Q9NZU1 646 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 ERVW-1Q9UQF0 538 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 R4GN57 208 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 SPACA6W5XKT8 324 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 PHRF1Q9P1Y6 1649 aaKnown RBP6.73□□□□□ -1.33
NEDD9-202ENST00000379446 HEPACAM2A8MVW5 462 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 NVLO15381 856 aaKnown RBP6.73□□□□□ -1.33
NEDD9-202ENST00000379446 PMPCBO75439 489 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 FBXO21O94952 628 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 F2P00734 622 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 FECHP22830 423 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 FXR2P51116 673 aaKnown RBP eCLIP6.73□□□□□ -1.339e-8■■□□□ 11.8
NEDD9-202ENST00000379446 BLKP51451 505 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 CCR3P51677 355 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 PLTPP55058 493 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 SRSF11Q05519 484 aaKnown RBP6.73□□□□□ -1.33
NEDD9-202ENST00000379446 KLHL35Q6PF15 583 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 LAYNQ6UX15 382 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 ZPBP2Q6X784 338 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 PRICKLE2Q7Z3G6 844 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 FAM228AQ86W67 206 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 SYTL1Q8IYJ3 562 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 RNF10Q8N5U6 811 aaKnown RBP6.73□□□□□ -1.33
NEDD9-202ENST00000379446 HJURPQ8NCD3 748 aaPredicted RBP6.73□□□□□ -1.33
NEDD9-202ENST00000379446 TEKT4Q8WW24 435 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 CD101Q93033 1021 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 C18orf25Q96B23 403 aaPredicted RBP6.73□□□□□ -1.33
NEDD9-202ENST00000379446 ASB3Q9Y575 518 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 TJP1Q07157 1748 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 SPTAN1Q13813 2472 aaKnown RBP6.73□□□□□ -1.33
NEDD9-202ENST00000379446 SSU72P8A0A1W2PR75 194 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 ARHGAP10A1A4S6 786 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 GSAPA4D1B5 854 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 EME2A4GXA9 379 aaPredicted RBP6.73□□□□□ -1.33
NEDD9-202ENST00000379446 GMNCA6NCL1 334 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 SYN3O14994 580 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 NDUFS3O75489 264 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 CCDC130P13994 396 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 VIPR2P41587 438 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 MAGOHP61326 146 aaKnown RBP6.73□□□□□ -1.33
NEDD9-202ENST00000379446 SNRPD1P62314 119 aaKnown RBP6.73□□□□□ -1.33
NEDD9-202ENST00000379446 LBRQ14739 615 aaKnown RBP6.73□□□□□ -1.33
NEDD9-202ENST00000379446 FIGNQ5HY92 759 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 FAAH2Q6GMR7 532 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 NT5DC3Q86UY8 548 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 CCDC197Q8NCU1 140 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 MYCBPAPQ8TBZ2 947 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 MCOLN3Q8TDD5 553 aa6.73□□□□□ -1.33
NEDD9-202ENST00000379446 AENQ8WTP8 325 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 338 ms