RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 ARF5P84085 180 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 BST2Q10589 180 aaKnown RBP14.43□□□□□ -0.1
TRIM13-202ENST00000378182 DNAJC3Q13217 504 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 ZNF618Q5T7W0 954 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 FAM171BQ6P995 826 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 CCDC185Q8N715 623 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 FNDC5Q8NAU1 212 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 PMM1Q92871 262 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 TBCDQ9BTW9 1192 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 ZCCHC2Q9C0B9 1178 aaKnown RBP14.43□□□□□ -0.1
TRIM13-202ENST00000378182 CISHQ9NSE2 258 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 A0A1W2PQC6 194 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 TMEM150BA6NC51 233 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 KLHL41O60662 606 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 JAK1P23458 1154 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 RCAN1P53805 252 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 CHRNB3Q05901 458 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 PPIL2Q13356 520 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 DEFB115Q30KQ5 88 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 POMZP3Q6PJE2 187 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 USP45Q70EL2 814 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 MDM1Q8TC05 714 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 RELTQ969Z4 430 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 ZCCHC17Q9NP64 241 aaKnown RBP14.43□□□□□ -0.1
TRIM13-202ENST00000378182 ITSN1Q15811 1721 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 KIF1CO43896 1103 aaKnown RBP14.43□□□□□ -0.1
TRIM13-202ENST00000378182 AGTP01019 485 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 KCNA3P22001 575 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 PKN1Q16512 942 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 GPAT3Q53EU6 434 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 SERPINA13PQ6UXR4 307 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 SLC30A10Q6XR72 485 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 ZNF34Q8IZ26 560 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 CACTIN-AS1Q8N1I8 211 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 WDR24Q96S15 920 aa14.43□□□□□ -0.1
TRIM13-202ENST00000378182 RTN3O95197 1032 aaPredicted RBP14.42□□□□□ -0.1
TRIM13-202ENST00000378182 EPORP19235 508 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 NFKB1P19838 968 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 SARSP49591 514 aaKnown RBP14.42□□□□□ -0.1
TRIM13-202ENST00000378182 RENBPP51606 427 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 DNAJC14Q6Y2X3 702 aaPredicted RBP14.42□□□□□ -0.1
TRIM13-202ENST00000378182 BARGINQ6ZT62 677 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 ARID3BQ8IVW6 561 aaPredicted RBP14.42□□□□□ -0.1
TRIM13-202ENST00000378182 FAM120BQ96EK7 910 aaKnown RBP14.42□□□□□ -0.1
TRIM13-202ENST00000378182 TBC1D13Q9NVG8 400 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 SPATA2Q9UM82 520 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 NDRG2Q9UN36 371 aaKnown RBP14.42□□□□□ -0.1
TRIM13-202ENST00000378182 CNTNAP5Q8WYK1 1306 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 CDH8P55286 799 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 DNAAF5Q86Y56 855 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 RBM7Q9Y580 266 aaKnown RBP14.42□□□□□ -0.1
TRIM13-202ENST00000378182 ANKDD1BA6NHY2 528 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 RAD51BO15315 384 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 NTSR2O95665 410 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 OTUD4Q01804 1114 aaKnown RBP14.42□□□□□ -0.1
TRIM13-202ENST00000378182 FIBCD1Q8N539 461 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 OSCP1Q8WVF1 389 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 CCSER1Q9C0I3 900 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 CYLDQ9NQC7 956 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 ASAH2Q9NR71 780 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 USP15Q9Y4E8 981 aaPredicted RBP14.42□□□□□ -0.1
TRIM13-202ENST00000378182 SPATA31A5Q5VU36 1347 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 SPATA31A7Q8IWB4 1347 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 RAB14P61106 215 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 ALG11Q2TAA5 492 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 USP42Q9H9J4 1324 aaKnown RBP14.42□□□□□ -0.1
TRIM13-202ENST00000378182 GTPBP1O00178 669 aaKnown RBP14.42□□□□□ -0.1
TRIM13-202ENST00000378182 CLK3P49761 638 aaKnown RBP14.42□□□□□ -0.1
TRIM13-202ENST00000378182 KLHDC7AQ5VTJ3 777 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 NEK7Q8TDX7 302 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 ZNF473Q8WTR7 871 aaKnown RBP14.42□□□□□ -0.1
TRIM13-202ENST00000378182 FAM50BQ9Y247 325 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 TRPV2Q9Y5S1 764 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 SMIM31A0A1B0GVY4 71 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 CFAP73A6NFT4 308 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 NKRFO15226 690 aaKnown RBP eCLIP14.42□□□□□ -0.1
TRIM13-202ENST00000378182 CCL16O15467 120 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 CDH16O75309 829 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 COPAP53621 1224 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 ERVK-9P63128 1117 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 ERVK-24P63145 666 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 IL5RAQ01344 420 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 ZNF621Q6ZSS3 439 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 C7orf61Q8IZ16 206 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 C2orf73Q8N5S3 287 aaPredicted RBP14.42□□□□□ -0.1
TRIM13-202ENST00000378182 ATP6V1C2Q8NEY4 427 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 EPB41L4AQ9HCS5 686 aaPredicted RBP14.42□□□□□ -0.1
TRIM13-202ENST00000378182 DUSP12Q9UNI6 340 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 SNX13Q9Y5W8 968 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 PREX2Q70Z35 1606 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 ALKQ9UM73 1620 aa14.42□□□□□ -0.1
TRIM13-202ENST00000378182 A0A0A6YYK5 440 aaPredicted RBP14.41□□□□□ -0.1
TRIM13-202ENST00000378182 PON1P27169 355 aa14.41□□□□□ -0.1
TRIM13-202ENST00000378182 GPR15P49685 360 aa14.41□□□□□ -0.1
TRIM13-202ENST00000378182 SGMS1Q86VZ5 419 aa14.41□□□□□ -0.1
TRIM13-202ENST00000378182 HELQQ8TDG4 1101 aa14.41□□□□□ -0.1
TRIM13-202ENST00000378182 FAM20BO75063 409 aa14.41□□□□□ -0.1
TRIM13-202ENST00000378182 LPPQ93052 612 aa14.41□□□□□ -0.1
TRIM13-202ENST00000378182 HTATIP2Q9BUP3 242 aa14.41□□□□□ -0.1
TRIM13-202ENST00000378182 CARD9Q9H257 536 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms