RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 ABCG1P45844 678 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 KCTD19Q17RG1 926 aaPredicted RBP16.7■□□□□ 0.26
RGP1-201ENST00000378078 DNAJC9Q8WXX5 260 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 KCNS3Q9BQ31 491 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 CD248Q9HCU0 757 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 ARHGEF12Q9NZN5 1544 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 SNTNA6NMZ2 147 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 ZBTB22O15209 634 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 NDUFV1P49821 464 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 SKA1Q96BD8 255 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 APBA2Q99767 749 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 GLIS2Q9BZE0 524 aaPredicted RBP16.69■□□□□ 0.26
RGP1-201ENST00000378078 GULP1Q9UBP9 304 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 TRIM3O75382 744 aaPredicted RBP16.69■□□□□ 0.26
RGP1-201ENST00000378078 SEC13P55735 322 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 TRIQKQ629K1 86 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 KLHL23Q8NBE8 558 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 GMCL1Q96IK5 515 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 CBWD1Q9BRT8 395 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 LOC102724159A0A0B4J2E5 919 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 DNALI1O14645 258 aaPredicted RBP16.69■□□□□ 0.26
RGP1-201ENST00000378078 FXR1P51114 621 aaKnown RBP eCLIP16.69■□□□□ 0.26
RGP1-201ENST00000378078 PWP2Q15269 919 aaKnown RBP16.69■□□□□ 0.26
RGP1-201ENST00000378078 TERF2Q15554 542 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 SEL1L3Q68CR1 1132 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 OVOS1Q6IE37 1185 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 ZNF671Q8TAW3 534 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 FAM45AQ8TCE6 357 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 FAM151AQ8WW52 585 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 ZW10O43264 779 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 RAET1GQ6H3X3 334 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 MID1IP1Q9NPA3 183 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 XPNPEP3Q9NQH7 507 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 ERCC2P18074 760 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 PAICSP22234 425 aaKnown RBP16.69■□□□□ 0.26
RGP1-201ENST00000378078 AQP5P55064 265 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 MRPL48Q96GC5 212 aaKnown RBP16.69■□□□□ 0.26
RGP1-201ENST00000378078 C7orf25Q9BPX7 421 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 TMEM79Q9BSE2 394 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 CCSER1Q9C0I3 900 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 LRRC4BQ9NT99 713 aa16.69■□□□□ 0.26
RGP1-201ENST00000378078 SDR42E2A6NKP2 422 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 CES2O00748 559 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 SNPHO15079 494 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 HSD17B3P37058 310 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 CDH8P55286 799 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 NEDD8Q15843 81 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 SNX30Q5VWJ9 437 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 EFCAB3Q8N7B9 438 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 GINS4Q9BRT9 223 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 LIMD1Q9UGP4 676 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 FAM50BQ9Y247 325 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 PLEKHG2Q9H7P9 1386 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 SLC25A12O75746 678 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 RASA1P20936 1047 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 HOXA7P31268 230 aaPredicted RBP16.68■□□□□ 0.26
RGP1-201ENST00000378078 RPTNQ6XPR3 784 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 USP49Q70CQ1 688 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 TMEM120AQ9BXJ8 343 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 GRIP2Q9C0E4 1043 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 BTN3A1O00481 513 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 FFAR2O15552 330 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 AMPD2Q01433 879 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 UBE2OQ9C0C9 1292 aaKnown RBP16.68■□□□□ 0.26
RGP1-201ENST00000378078 CIDEBQ9UHD4 219 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 H0Y858 1186 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 TRIM24O15164 1050 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 CNOT3O75175 753 aaKnown RBP16.68■□□□□ 0.26
RGP1-201ENST00000378078 GJB6O95452 261 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 MGAT1P26572 445 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 MFSD10Q14728 455 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 CBWD6Q4V339 395 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 RTL3Q8N8U3 475 aaKnown RBP16.68■□□□□ 0.26
RGP1-201ENST00000378078 PCSK9Q8NBP7 692 aaKnown RBP16.68■□□□□ 0.26
RGP1-201ENST00000378078 FEM1CQ96JP0 617 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 BPIFA3Q9BQP9 254 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 BHLHE41Q9C0J9 482 aaPredicted RBP16.68■□□□□ 0.26
RGP1-201ENST00000378078 ADARB2Q9NS39 739 aaKnown RBP16.68■□□□□ 0.26
RGP1-201ENST00000378078 SLC27A5Q9Y2P5 690 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 IL1BP01584 269 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 SRGNP10124 158 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 ALOX12P18054 663 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 REXO1L1PQ8IX06 675 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 RXFP2Q8WXD0 754 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 SUSD6Q92537 303 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 VPS9D1Q9Y2B5 631 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 NRKQ7Z2Y5 1582 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 MED24O75448 989 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 KHDRBS3O75525 346 aaKnown RBP16.68■□□□□ 0.26
RGP1-201ENST00000378078 PTPN3P26045 913 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 POLD2P49005 469 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 PDIA5Q14554 519 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 TFDP3Q5H9I0 405 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 MYLK2Q9H1R3 596 aa16.68■□□□□ 0.26
RGP1-201ENST00000378078 DYTNA2CJ06 578 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 TSPAN8P19075 237 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 SDHAF4Q5VUM1 108 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 ZNF544Q6NX49 715 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 CYP2R1Q6VVX0 501 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 NRSN1Q8IZ57 195 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms