RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 C7P10643 843 aa20.01■□□□□ 0.79
CBWD3-204ENST00000377349 NCAM1P13591 858 aa20.01■□□□□ 0.79
CBWD3-204ENST00000377349 HOXD9P28356 352 aaPredicted RBP20.01■□□□□ 0.79
CBWD3-204ENST00000377349 BCAT1P54687 386 aa20.01■□□□□ 0.79
CBWD3-204ENST00000377349 PDE4CQ08493 712 aa20.01■□□□□ 0.79
CBWD3-204ENST00000377349 EIF4HQ15056 248 aaKnown RBP20.01■□□□□ 0.79
CBWD3-204ENST00000377349 CADM4Q8NFZ8 388 aa20.01■□□□□ 0.79
CBWD3-204ENST00000377349 C1orf216Q8TAB5 229 aa20.01■□□□□ 0.79
CBWD3-204ENST00000377349 PLD4Q96BZ4 506 aa20.01■□□□□ 0.79
CBWD3-204ENST00000377349 A0A1B0GTW7 788 aa20■□□□□ 0.79
CBWD3-204ENST00000377349 TAF4O00268 1085 aa20■□□□□ 0.79
CBWD3-204ENST00000377349 PIK3R2O00459 728 aa20■□□□□ 0.79
CBWD3-204ENST00000377349 CBFA2T3O75081 653 aa20■□□□□ 0.79
CBWD3-204ENST00000377349 CALCAP01258 141 aa20■□□□□ 0.79
CBWD3-204ENST00000377349 GNSP15586 552 aa20■□□□□ 0.79
CBWD3-204ENST00000377349 ADIGQ0VDE8 80 aa20■□□□□ 0.79
CBWD3-204ENST00000377349 BST2Q10589 180 aaKnown RBP20■□□□□ 0.79
CBWD3-204ENST00000377349 HNRNPDQ14103 355 aaKnown RBP20■□□□□ 0.79
CBWD3-204ENST00000377349 ZNF423Q2M1K9 1284 aa20■□□□□ 0.79
CBWD3-204ENST00000377349 RRAGAQ7L523 313 aa20■□□□□ 0.79
CBWD3-204ENST00000377349 NAXDQ8IW45 347 aa20■□□□□ 0.79
CBWD3-204ENST00000377349 ELOA2Q8IYF1 753 aaPredicted RBP20■□□□□ 0.79
CBWD3-204ENST00000377349 SIX6OS1Q8N1H7 587 aa20■□□□□ 0.79
CBWD3-204ENST00000377349 ZCCHC9Q8N567 271 aaKnown RBP20■□□□□ 0.79
CBWD3-204ENST00000377349 UCMAQ8WVF2 138 aa20■□□□□ 0.79
CBWD3-204ENST00000377349 KAT5Q92993 513 aa20■□□□□ 0.79
CBWD3-204ENST00000377349 SIPA1Q96FS4 1042 aa20■□□□□ 0.79
CBWD3-204ENST00000377349 SLC2A11Q9BYW1 496 aa20■□□□□ 0.79
CBWD3-204ENST00000377349 STRIP2Q9ULQ0 834 aa20■□□□□ 0.79
CBWD3-204ENST00000377349 SLCO1B1Q9Y6L6 691 aa20■□□□□ 0.79
CBWD3-204ENST00000377349 METTL12A8MUP2 240 aa19.99■□□□□ 0.79
CBWD3-204ENST00000377349 MEI4A8MW99 385 aa19.99■□□□□ 0.79
CBWD3-204ENST00000377349 XPO1O14980 1071 aaKnown RBP19.99■□□□□ 0.79
CBWD3-204ENST00000377349 LCP1P13796 627 aa19.99■□□□□ 0.79
CBWD3-204ENST00000377349 RGS7P49802 495 aa19.99■□□□□ 0.79
CBWD3-204ENST00000377349 TRIP6Q15654 476 aaKnown RBP19.99■□□□□ 0.79
CBWD3-204ENST00000377349 DCAF12L1Q5VU92 463 aa19.99■□□□□ 0.79
CBWD3-204ENST00000377349 UBR7Q8N806 425 aa19.99■□□□□ 0.79
CBWD3-204ENST00000377349 DDI1Q8WTU0 396 aa19.99■□□□□ 0.79
CBWD3-204ENST00000377349 SRRTQ9BXP5 876 aaKnown RBP19.99■□□□□ 0.79
CBWD3-204ENST00000377349 ZDHHC5Q9C0B5 715 aa19.99■□□□□ 0.79
CBWD3-204ENST00000377349 CIPCQ9C0C6 399 aa19.99■□□□□ 0.79
CBWD3-204ENST00000377349 IL21RQ9HBE5 538 aa19.99■□□□□ 0.79
CBWD3-204ENST00000377349 STOML2Q9UJZ1 356 aa19.99■□□□□ 0.79
CBWD3-204ENST00000377349 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.99■□□□□ 0.79
CBWD3-204ENST00000377349 DOCK9Q9BZ29 2069 aa19.98■□□□□ 0.79
CBWD3-204ENST00000377349 M0QYV0 167 aa19.98■□□□□ 0.79
CBWD3-204ENST00000377349 SYNCRIPO60506 623 aaKnown RBP19.98■□□□□ 0.79
CBWD3-204ENST00000377349 CYBBP04839 570 aa19.98■□□□□ 0.79
CBWD3-204ENST00000377349 VDRP11473 427 aa19.98■□□□□ 0.79
CBWD3-204ENST00000377349 HLA-EP13747 358 aa19.98■□□□□ 0.79
CBWD3-204ENST00000377349 HLA-FP30511 346 aa19.98■□□□□ 0.79
CBWD3-204ENST00000377349 CACUL1Q86Y37 369 aa19.98■□□□□ 0.79
CBWD3-204ENST00000377349 FMNL3Q8IVF7 1028 aa19.98■□□□□ 0.79
CBWD3-204ENST00000377349 EDEM1Q92611 657 aa19.98■□□□□ 0.79
CBWD3-204ENST00000377349 PRCCQ92733 491 aaPredicted RBP19.98■□□□□ 0.79
CBWD3-204ENST00000377349 TMEM245Q9H330 911 aa19.98■□□□□ 0.79
CBWD3-204ENST00000377349 SFMBT1Q9UHJ3 866 aa19.98■□□□□ 0.79
CBWD3-204ENST00000377349 URB1O60287 2271 aaKnown RBP19.97■□□□□ 0.79
CBWD3-204ENST00000377349 YJEFN3A6XGL0 299 aa19.97■□□□□ 0.79
CBWD3-204ENST00000377349 E7ENQ6 273 aa19.97■□□□□ 0.79
CBWD3-204ENST00000377349 GABBR2O75899 941 aa19.97■□□□□ 0.79
CBWD3-204ENST00000377349 EPHX1P07099 455 aa19.97■□□□□ 0.79
CBWD3-204ENST00000377349 FTH1P19P0C7X4 201 aa19.97■□□□□ 0.79
CBWD3-204ENST00000377349 KRT5P13647 590 aa19.97■□□□□ 0.79
CBWD3-204ENST00000377349 HOXB3P14651 431 aaPredicted RBP19.97■□□□□ 0.79
CBWD3-204ENST00000377349 BRD2P25440 801 aaKnown RBP19.97■□□□□ 0.79
CBWD3-204ENST00000377349 OXTRP30559 389 aa19.97■□□□□ 0.79
CBWD3-204ENST00000377349 UBE2HP62256 183 aa19.97■□□□□ 0.79
CBWD3-204ENST00000377349 KCNH2Q12809 1159 aa19.97■□□□□ 0.79
CBWD3-204ENST00000377349 CAMK2GQ13555 558 aaPredicted RBP19.97■□□□□ 0.79
CBWD3-204ENST00000377349 PKDCCQ504Y2 493 aa19.97■□□□□ 0.79
CBWD3-204ENST00000377349 KIAA0907Q7Z7F0 614 aaPredicted RBP19.97■□□□□ 0.79
CBWD3-204ENST00000377349 ARHGEF19Q8IW93 802 aa19.97■□□□□ 0.79
CBWD3-204ENST00000377349 RNF139Q8WU17 664 aa19.97■□□□□ 0.79
CBWD3-204ENST00000377349 ADAMTS14Q8WXS8 1223 aa19.97■□□□□ 0.79
CBWD3-204ENST00000377349 CHMP5Q9NZZ3 219 aa19.97■□□□□ 0.79
CBWD3-204ENST00000377349 FNDC3AQ9Y2H6 1198 aaKnown RBP19.97■□□□□ 0.79
CBWD3-204ENST00000377349 ARID1BQ8NFD5 2236 aaPredicted RBP19.97■□□□□ 0.79
CBWD3-204ENST00000377349 IGSF10Q6WRI0 2623 aa19.96■□□□□ 0.79
CBWD3-204ENST00000377349 O00370 1275 aa19.96■□□□□ 0.79
CBWD3-204ENST00000377349 TSPAN3O60637 253 aa19.96■□□□□ 0.79
CBWD3-204ENST00000377349 GNA14O95837 355 aa19.96■□□□□ 0.79
CBWD3-204ENST00000377349 AFPP02771 609 aaKnown RBP19.96■□□□□ 0.79
CBWD3-204ENST00000377349 SGSHP51688 502 aa19.96■□□□□ 0.79
CBWD3-204ENST00000377349 PTPRNQ16849 979 aa19.96■□□□□ 0.79
CBWD3-204ENST00000377349 MPPE1Q53F39 396 aa19.96■□□□□ 0.79
CBWD3-204ENST00000377349 BSPRYQ5W0U4 402 aa19.96■□□□□ 0.79
CBWD3-204ENST00000377349 SERPINA13PQ6UXR4 307 aa19.96■□□□□ 0.79
CBWD3-204ENST00000377349 GLRX5Q86SX6 157 aa19.96■□□□□ 0.79
CBWD3-204ENST00000377349 ADIPOR2Q86V24 386 aa19.96■□□□□ 0.79
CBWD3-204ENST00000377349 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.96■□□□□ 0.79
CBWD3-204ENST00000377349 PNPLA1Q8N8W4 532 aa19.96■□□□□ 0.79
CBWD3-204ENST00000377349 OR2T3Q8NH03 318 aa19.96■□□□□ 0.79
CBWD3-204ENST00000377349 NUP58Q9BVL2 599 aa19.96■□□□□ 0.79
CBWD3-204ENST00000377349 MIR1-1HGQ9H1L0 117 aa19.96■□□□□ 0.79
CBWD3-204ENST00000377349 OLA1Q9NTK5 396 aaKnown RBP19.96■□□□□ 0.79
CBWD3-204ENST00000377349 PCOLCE2Q9UKZ9 415 aa19.96■□□□□ 0.79
CBWD3-204ENST00000377349 HBS1LQ9Y450 684 aaKnown RBP19.96■□□□□ 0.79
CBWD3-204ENST00000377349 BCAT2O15382 392 aaPredicted RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms