RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 RNF111Q6ZNA4 994 aa13.62□□□□□ -0.23
ACTN1-202ENST00000376839 GADL1Q6ZQY3 521 aa13.62□□□□□ -0.23
ACTN1-202ENST00000376839 SESTD1Q86VW0 696 aa13.62□□□□□ -0.23
ACTN1-202ENST00000376839 C10orf107Q8IVU9 208 aa13.62□□□□□ -0.23
ACTN1-202ENST00000376839 AKT3Q9Y243 479 aa13.62□□□□□ -0.23
ACTN1-202ENST00000376839 SNX9Q9Y5X1 595 aa13.62□□□□□ -0.23
ACTN1-202ENST00000376839 ADCY6O43306 1168 aa13.62□□□□□ -0.23
ACTN1-202ENST00000376839 BUD23O43709 281 aaKnown RBP13.62□□□□□ -0.23
ACTN1-202ENST00000376839 SIN3BO75182 1162 aa13.62□□□□□ -0.23
ACTN1-202ENST00000376839 USP2O75604 605 aaPredicted RBP13.62□□□□□ -0.23
ACTN1-202ENST00000376839 CNMDO75829 334 aa13.62□□□□□ -0.23
ACTN1-202ENST00000376839 PDE5AO76074 875 aa13.62□□□□□ -0.23
ACTN1-202ENST00000376839 ALDH1A2O94788 518 aa13.62□□□□□ -0.23
ACTN1-202ENST00000376839 LYNP07948 512 aa13.62□□□□□ -0.23
ACTN1-202ENST00000376839 MGAT1P26572 445 aa13.62□□□□□ -0.23
ACTN1-202ENST00000376839 PEX6Q13608 980 aa13.62□□□□□ -0.23
ACTN1-202ENST00000376839 HIC1Q14526 733 aa13.62□□□□□ -0.23
ACTN1-202ENST00000376839 SOWAHAQ2M3V2 549 aa13.62□□□□□ -0.23
ACTN1-202ENST00000376839 TMCO4Q5TGY1 634 aa13.62□□□□□ -0.23
ACTN1-202ENST00000376839 SORT1Q99523 831 aa13.62□□□□□ -0.23
ACTN1-202ENST00000376839 DPEP3Q9H4B8 488 aa13.62□□□□□ -0.23
ACTN1-202ENST00000376839 GPAMQ9HCL2 828 aa13.62□□□□□ -0.23
ACTN1-202ENST00000376839 PTPRFP10586 1907 aa13.62□□□□□ -0.23
ACTN1-202ENST00000376839 KIF3CO14782 793 aa13.61□□□□□ -0.23
ACTN1-202ENST00000376839 GLRA3O75311 464 aa13.61□□□□□ -0.23
ACTN1-202ENST00000376839 ATP5BP06576 529 aaKnown RBP13.61□□□□□ -0.23
ACTN1-202ENST00000376839 TXNP10599 105 aaKnown RBP13.61□□□□□ -0.23
ACTN1-202ENST00000376839 GOT1P17174 413 aa13.61□□□□□ -0.23
ACTN1-202ENST00000376839 CRABP2P29373 138 aa13.61□□□□□ -0.23
ACTN1-202ENST00000376839 STILQ15468 1287 aa13.61□□□□□ -0.23
ACTN1-202ENST00000376839 GSTA3Q16772 222 aa13.61□□□□□ -0.23
ACTN1-202ENST00000376839 C11orf91Q3C1V1 193 aa13.61□□□□□ -0.23
ACTN1-202ENST00000376839 CES3Q6UWW8 571 aa13.61□□□□□ -0.23
ACTN1-202ENST00000376839 HTR3CQ8WXA8 447 aa13.61□□□□□ -0.23
ACTN1-202ENST00000376839 ARNTL2Q8WYA1 636 aa13.61□□□□□ -0.23
ACTN1-202ENST00000376839 TUBGCP5Q96RT8 1024 aa13.61□□□□□ -0.23
ACTN1-202ENST00000376839 C11orf84Q9BUA3 381 aaPredicted RBP13.61□□□□□ -0.23
ACTN1-202ENST00000376839 RNF19AQ9NV58 838 aa13.61□□□□□ -0.23
ACTN1-202ENST00000376839 ZNF358Q9NW07 568 aa13.61□□□□□ -0.23
ACTN1-202ENST00000376839 F7P08709 466 aaPredicted RBP13.61□□□□□ -0.23
ACTN1-202ENST00000376839 CNTFP26441 200 aa13.61□□□□□ -0.23
ACTN1-202ENST00000376839 IDH3AP50213 366 aa13.61□□□□□ -0.23
ACTN1-202ENST00000376839 EPHB1P54762 984 aa13.61□□□□□ -0.23
ACTN1-202ENST00000376839 LRRC36Q1X8D7 754 aa13.61□□□□□ -0.23
ACTN1-202ENST00000376839 EFHC1Q5JVL4 640 aa13.61□□□□□ -0.23
ACTN1-202ENST00000376839 ZNF772Q68DY9 489 aaPredicted RBP13.61□□□□□ -0.23
ACTN1-202ENST00000376839 S100A14Q9HCY8 104 aa13.61□□□□□ -0.23
ACTN1-202ENST00000376839 TXNRD2Q9NNW7 524 aa13.61□□□□□ -0.23
ACTN1-202ENST00000376839 APOBEC2Q9Y235 224 aaKnown RBP13.61□□□□□ -0.23
ACTN1-202ENST00000376839 A0A0A0MRY4 1105 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 ZNF487B1APH4 448 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 FZD9O00144 591 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 ITGA2BP08514 1039 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 NR2C2P49116 596 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 SLC26A2P50443 739 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 EFCAB3Q8N7B9 438 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 C7orf31Q8N865 590 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 COLGALT1Q8NBJ5 622 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 TFB1MQ8WVM0 346 aaKnown RBP13.6□□□□□ -0.23
ACTN1-202ENST00000376839 CCDC124Q96CT7 223 aaKnown RBP13.6□□□□□ -0.23
ACTN1-202ENST00000376839 SPATA13Q96N96 652 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 NR1H4Q96RI1 486 aaPredicted RBP13.6□□□□□ -0.23
ACTN1-202ENST00000376839 GCOM2Q9BZD3 368 aaPredicted RBP13.6□□□□□ -0.23
ACTN1-202ENST00000376839 EBF3Q9H4W6 596 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 CYP4F11Q9HBI6 524 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 TMEM216Q9P0N5 145 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 DNAJB4Q9UDY4 337 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 SORCS3Q9UPU3 1222 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 CITO14578 2027 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 MFSD11O43934 449 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 RNASEH1O60930 286 aaKnown RBP13.6□□□□□ -0.23
ACTN1-202ENST00000376839 STAU1O95793 577 aaKnown RBP13.6□□□□□ -0.23
ACTN1-202ENST00000376839 PROCP04070 461 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 SERPINE1P05121 402 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 LCP1P13796 627 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 PTPN9P43378 593 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 COPAP53621 1224 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 OLIG2Q13516 323 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 CCNIQ14094 377 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 STXBP5Q5T5C0 1151 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 CWF19L1Q69YN2 538 aaKnown RBP13.6□□□□□ -0.23
ACTN1-202ENST00000376839 CYS1Q717R9 158 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 ACMSDQ8TDX5 336 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 CENPIQ92674 756 aaPredicted RBP13.6□□□□□ -0.23
ACTN1-202ENST00000376839 OLFM3Q96PB7 478 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 SH3GL3Q99963 347 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 SYBUQ9NX95 663 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 USP3Q9Y6I4 520 aa13.6□□□□□ -0.23
ACTN1-202ENST00000376839 ZNF195O14628 629 aa13.59□□□□□ -0.23
ACTN1-202ENST00000376839 TSPAN1O60635 241 aa13.59□□□□□ -0.23
ACTN1-202ENST00000376839 FKBP6O75344 327 aa13.59□□□□□ -0.23
ACTN1-202ENST00000376839 DGKIO75912 1065 aa13.59□□□□□ -0.23
ACTN1-202ENST00000376839 ERVK-10P10266 1014 aa13.59□□□□□ -0.23
ACTN1-202ENST00000376839 CCDC130P13994 396 aa13.59□□□□□ -0.23
ACTN1-202ENST00000376839 ZFXP17010 805 aaPredicted RBP13.59□□□□□ -0.23
ACTN1-202ENST00000376839 POLE2P56282 527 aa13.59□□□□□ -0.23
ACTN1-202ENST00000376839 CMC1Q7Z7K0 106 aa13.59□□□□□ -0.23
ACTN1-202ENST00000376839 GALNT15Q8N3T1 639 aa13.59□□□□□ -0.23
ACTN1-202ENST00000376839 ZMAT2Q96NC0 199 aaKnown RBP13.59□□□□□ -0.23
ACTN1-202ENST00000376839 TRAPPC9Q96Q05 1148 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms