RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 KIF11P52732 1056 aa13.74□□□□□ -0.21
CLCN6-205ENST00000376492 ZNF132P52740 706 aa13.74□□□□□ -0.21
CLCN6-205ENST00000376492 ZNF445P59923 1031 aa13.74□□□□□ -0.21
CLCN6-205ENST00000376492 PPP3CAQ08209 521 aa13.74□□□□□ -0.21
CLCN6-205ENST00000376492 EFEMP1Q12805 493 aa13.74□□□□□ -0.21
CLCN6-205ENST00000376492 TTI2Q6NXR4 508 aa13.74□□□□□ -0.21
CLCN6-205ENST00000376492 UNC93AQ86WB7 457 aa13.74□□□□□ -0.21
CLCN6-205ENST00000376492 UCMAQ8WVF2 138 aa13.74□□□□□ -0.21
CLCN6-205ENST00000376492 CYFIP2Q96F07 1278 aa13.74□□□□□ -0.21
CLCN6-205ENST00000376492 CEP63Q96MT8 703 aa13.74□□□□□ -0.21
CLCN6-205ENST00000376492 ELOVL2Q9NXB9 296 aa13.74□□□□□ -0.21
CLCN6-205ENST00000376492 AGO1Q9UL18 857 aaKnown RBP13.74□□□□□ -0.21
CLCN6-205ENST00000376492 FLNBO75369 2602 aaKnown RBP13.74□□□□□ -0.21
CLCN6-205ENST00000376492 BICDL2A1A5D9 508 aa13.73□□□□□ -0.21
CLCN6-205ENST00000376492 EIF4E1BA6NMX2 242 aaKnown RBP13.73□□□□□ -0.21
CLCN6-205ENST00000376492 STX10O60499 249 aa13.73□□□□□ -0.21
CLCN6-205ENST00000376492 ASS1P00966 412 aaKnown RBP13.73□□□□□ -0.21
CLCN6-205ENST00000376492 HLA-DRAP01903 254 aa13.73□□□□□ -0.21
CLCN6-205ENST00000376492 TRIM49P0CI25 452 aa13.73□□□□□ -0.21
CLCN6-205ENST00000376492 TRIM49CP0CI26 452 aa13.73□□□□□ -0.21
CLCN6-205ENST00000376492 ACSL1P33121 698 aa13.73□□□□□ -0.21
CLCN6-205ENST00000376492 PIK3CAP42336 1068 aa13.73□□□□□ -0.21
CLCN6-205ENST00000376492 GCLMP48507 274 aa13.73□□□□□ -0.21
CLCN6-205ENST00000376492 IL9RQ01113 521 aa13.73□□□□□ -0.21
CLCN6-205ENST00000376492 PTPRNQ16849 979 aa13.73□□□□□ -0.21
CLCN6-205ENST00000376492 KCNT1Q5JUK3 1230 aa13.73□□□□□ -0.21
CLCN6-205ENST00000376492 KRT39Q6A163 491 aa13.73□□□□□ -0.21
CLCN6-205ENST00000376492 SERPINA13PQ6UXR4 307 aa13.73□□□□□ -0.21
CLCN6-205ENST00000376492 CCDC186Q7Z3E2 898 aa13.73□□□□□ -0.21
CLCN6-205ENST00000376492 DENND1CQ8IV53 801 aa13.73□□□□□ -0.21
CLCN6-205ENST00000376492 ZNF366Q8N895 744 aa13.73□□□□□ -0.21
CLCN6-205ENST00000376492 ADAM32Q8TC27 787 aa13.73□□□□□ -0.21
CLCN6-205ENST00000376492 NELFBQ8WX92 580 aa13.73□□□□□ -0.21
CLCN6-205ENST00000376492 DCBLD2Q96PD2 775 aa13.73□□□□□ -0.21
CLCN6-205ENST00000376492 NUP62CLQ9H1M0 184 aa13.73□□□□□ -0.21
CLCN6-205ENST00000376492 APOBEC3GQ9HC16 384 aaKnown RBP13.73□□□□□ -0.21
CLCN6-205ENST00000376492 TMEM8AQ9HCN3 771 aa13.73□□□□□ -0.21
CLCN6-205ENST00000376492 PNPLA8Q9NP80 782 aa13.73□□□□□ -0.21
CLCN6-205ENST00000376492 ANKRD6Q9Y2G4 727 aa13.73□□□□□ -0.21
CLCN6-205ENST00000376492 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.73□□□□□ -0.21
CLCN6-205ENST00000376492 A0A087WV48 116 aa13.72□□□□□ -0.21
CLCN6-205ENST00000376492 TNFSF14O43557 240 aa13.72□□□□□ -0.21
CLCN6-205ENST00000376492 RALAP11233 206 aa13.72□□□□□ -0.21
CLCN6-205ENST00000376492 CD58P19256 250 aa13.72□□□□□ -0.21
CLCN6-205ENST00000376492 CHKAP35790 457 aa13.72□□□□□ -0.21
CLCN6-205ENST00000376492 CLDN6P56747 220 aa13.72□□□□□ -0.21
CLCN6-205ENST00000376492 INCA1Q0VD86 236 aa13.72□□□□□ -0.21
CLCN6-205ENST00000376492 EIF4HQ15056 248 aaKnown RBP13.72□□□□□ -0.21
CLCN6-205ENST00000376492 SMAD1Q15797 465 aaKnown RBP13.72□□□□□ -0.21
CLCN6-205ENST00000376492 KLHL10Q6JEL2 608 aa13.72□□□□□ -0.21
CLCN6-205ENST00000376492 CAVIN1Q6NZI2 390 aaKnown RBP13.72□□□□□ -0.21
CLCN6-205ENST00000376492 DHRS13Q6UX07 377 aa13.72□□□□□ -0.21
CLCN6-205ENST00000376492 TADA2BQ86TJ2 420 aa13.72□□□□□ -0.21
CLCN6-205ENST00000376492 GALNT15Q8N3T1 639 aa13.72□□□□□ -0.21
CLCN6-205ENST00000376492 OR2T3Q8NH03 318 aa13.72□□□□□ -0.21
CLCN6-205ENST00000376492 TAS1R2Q8TE23 839 aa13.72□□□□□ -0.21
CLCN6-205ENST00000376492 LHX5Q9H2C1 402 aa13.72□□□□□ -0.21
CLCN6-205ENST00000376492 METTL14Q9HCE5 456 aaKnown RBP13.72□□□□□ -0.21
CLCN6-205ENST00000376492 TM9SF3Q9HD45 589 aa13.72□□□□□ -0.21
CLCN6-205ENST00000376492 CLIC5Q9NZA1 410 aa13.72□□□□□ -0.21
CLCN6-205ENST00000376492 TMEM63CQ9P1W3 806 aa13.72□□□□□ -0.21
CLCN6-205ENST00000376492 ARMCX3Q9UH62 379 aaPredicted RBP13.72□□□□□ -0.21
CLCN6-205ENST00000376492 ZNF510Q9Y2H8 683 aa13.72□□□□□ -0.21
CLCN6-205ENST00000376492 USP3Q9Y6I4 520 aa13.72□□□□□ -0.21
CLCN6-205ENST00000376492 URB1O60287 2271 aaKnown RBP13.72□□□□□ -0.21
CLCN6-205ENST00000376492 H0Y8X5 98 aa13.71□□□□□ -0.21
CLCN6-205ENST00000376492 CYBBP04839 570 aa13.71□□□□□ -0.21
CLCN6-205ENST00000376492 PSEN1P49768 467 aa13.71□□□□□ -0.21
CLCN6-205ENST00000376492 CCT8P50990 548 aa13.71□□□□□ -0.21
CLCN6-205ENST00000376492 COG7P83436 770 aa13.71□□□□□ -0.21
CLCN6-205ENST00000376492 PAK1Q13153 545 aa13.71□□□□□ -0.21
CLCN6-205ENST00000376492 CAMK2GQ13555 558 aaPredicted RBP13.71□□□□□ -0.21
CLCN6-205ENST00000376492 SUZ12Q15022 739 aaKnown RBP13.71□□□□□ -0.21
CLCN6-205ENST00000376492 MLKLQ8NB16 471 aa13.71□□□□□ -0.21
CLCN6-205ENST00000376492 PIP4K2CQ8TBX8 421 aa13.71□□□□□ -0.21
CLCN6-205ENST00000376492 DDI1Q8WTU0 396 aa13.71□□□□□ -0.21
CLCN6-205ENST00000376492 CYB5D2Q8WUJ1 264 aa13.71□□□□□ -0.21
CLCN6-205ENST00000376492 BIRC7Q96CA5 298 aa13.71□□□□□ -0.21
CLCN6-205ENST00000376492 FAXDC2Q96IV6 333 aa13.71□□□□□ -0.21
CLCN6-205ENST00000376492 NT5C1AQ9BXI3 368 aa13.71□□□□□ -0.21
CLCN6-205ENST00000376492 PCED1AQ9H1Q7 454 aa13.71□□□□□ -0.21
CLCN6-205ENST00000376492 MARCH2Q9P0N8 246 aa13.71□□□□□ -0.21
CLCN6-205ENST00000376492 CTNND2Q9UQB3 1225 aa13.71□□□□□ -0.21
CLCN6-205ENST00000376492 ASH1LQ9NR48 2969 aaKnown RBP13.7□□□□□ -0.22
CLCN6-205ENST00000376492 ASXL3Q9C0F0 2248 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 SLC12A8A0AV02 714 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 PLK4O00444 970 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 PCDHGA12O60330 932 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 FSBPO95073 299 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 SEMA4FO95754 770 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 HOXD9P28356 352 aaPredicted RBP13.7□□□□□ -0.22
CLCN6-205ENST00000376492 HLA-FP30511 346 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 GRK6P43250 576 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 GRIA4P48058 902 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 MXI1P50539 228 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 ARID5AQ03989 594 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 TEAD4Q15561 434 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 ZSCAN23Q3MJ62 389 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 FNDC3BQ53EP0 1204 aaKnown RBP13.7□□□□□ -0.22
CLCN6-205ENST00000376492 ZNF394Q53GI3 561 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms