RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 MAGEA10P43363 369 aaPredicted RBP9.02□□□□□ -0.96
SHROOM4-202ENST00000376020 KCNJ1P48048 391 aa9.02□□□□□ -0.96
SHROOM4-202ENST00000376020 PRIM2P49643 509 aa9.02□□□□□ -0.96
SHROOM4-202ENST00000376020 GCNAQ96QF7 691 aa9.02□□□□□ -0.96
SHROOM4-202ENST00000376020 CGRRF1Q99675 332 aa9.02□□□□□ -0.96
SHROOM4-202ENST00000376020 KCTD14Q9BQ13 255 aaPredicted RBP9.02□□□□□ -0.96
SHROOM4-202ENST00000376020 SPATA16Q9BXB7 569 aa9.02□□□□□ -0.96
SHROOM4-202ENST00000376020 GIN1Q9NXP7 522 aa9.02□□□□□ -0.96
SHROOM4-202ENST00000376020 GABBR1Q9UBS5 961 aa9.02□□□□□ -0.96
SHROOM4-202ENST00000376020 SLC39A10Q9ULF5 831 aa9.02□□□□□ -0.96
SHROOM4-202ENST00000376020 C1orf232A0A0U1RR37 186 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 RGS5O15539 181 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 RPS6KA4O75676 772 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 GH2P01242 217 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 VDRP11473 427 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 ITGA2P17301 1181 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 SLC16A2P36021 539 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 TNFAIP8L3Q5GJ75 292 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 SPOCD1Q6ZMY3 1216 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 DIS3LQ8TF46 1054 aaKnown RBP9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 MXRA8Q9BRK3 442 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 TJP2Q9UDY2 1190 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 CDH9Q9ULB4 789 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 GSTK1Q9Y2Q3 226 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 GPC6Q9Y625 555 aaPredicted RBP9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 KIF13BQ9NQT8 1826 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 H3BMM5 538 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 RAD51BO15315 384 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 SEC24DO94855 1032 aaPredicted RBP9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 KCNJ2P63252 427 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 SPIRE1Q08AE8 756 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 KIAA0408Q6ZU52 694 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 ROPN1LQ96C74 230 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 TCF12Q99081 682 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 ZNF670Q9BS34 389 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 AP5M1Q9H0R1 490 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 ERAP1Q9NZ08 941 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 ASB14A6NK59 587 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 PEX1O43933 1283 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 CRTAMO95727 393 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 GPIP06744 558 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 NR3C2P08235 984 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 FAM153BP0C7A2 387 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 VCLP18206 1134 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 PPIBP23284 216 aaKnown RBP9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 FAM153CQ494X1 144 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 GJC2Q5T442 439 aaPredicted RBP9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 ZNF618Q5T7W0 954 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 INTS11Q5TA45 600 aaKnown RBP9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 COLGALT2Q8IYK4 626 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 SPICE1Q8N0Z3 855 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 NUP93Q8N1F7 819 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 RYBPQ8N488 228 aaPredicted RBP9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 BAP1Q92560 729 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 H2AFY2Q9P0M6 372 aaPredicted RBP9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 FARP1Q9Y4F1 1045 aaPredicted RBP9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 KNTC1P50748 2209 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 SMNDC1O75940 238 aaKnown RBP eCLIP9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 CYP3A4P08684 503 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 CSE1LP55060 971 aaKnown RBP9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 SMIM11AP58511 58 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 HERC3Q15034 1050 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 BBS12Q6ZW61 710 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 APOBEC3FQ8IUX4 373 aaKnown RBP9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 C4orf19Q8IY42 314 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 SLC20A1Q8WUM9 679 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 MTMR12Q9C0I1 747 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 CCDC59Q9P031 241 aaKnown RBP9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 SEC14L4Q9UDX3 406 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 USP17L10C9JJH3 530 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 TAF4O00268 1085 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 OGTO15294 1046 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 TSPAN9O75954 239 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 RASA1P20936 1047 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 GABRB2P47870 512 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 CDH24Q86UP0 819 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 CPA5Q8WXQ8 436 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 PROX1Q92786 737 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 ING4Q9UNL4 249 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 DNAJC16Q9Y2G8 782 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 WBP11Q9Y2W2 641 aaKnown RBP9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 TRIP11Q15643 1979 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 ZNF263O14978 683 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 S100A9P06702 114 aaKnown RBP9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 CYP19A1P11511 503 aaPredicted RBP9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 NFKB1P19838 968 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 HTR7P34969 479 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 IREB2P48200 963 aaKnown RBP9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 CYP24A1Q07973 514 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 SYCE2Q6PIF2 218 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 ALLCQ8N6M5 410 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 TMIEQ8NEW7 156 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 MLPHQ9BV36 600 aaPredicted RBP9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 INTS13Q9NVM9 706 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 ANAPC2Q9UJX6 822 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 ASAP1Q9ULH1 1129 aa9.02□□□□□ -0.97
SHROOM4-202ENST00000376020 ANKRD36CQ5JPF3 1778 aa9.01□□□□□ -0.97
SHROOM4-202ENST00000376020 EIF2AK2P19525 551 aaKnown RBP9.01□□□□□ -0.97
SHROOM4-202ENST00000376020 PPP2R1BP30154 601 aa9.01□□□□□ -0.97
SHROOM4-202ENST00000376020 GNA13Q14344 377 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms