RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 MAP3K20Q9NYL2 800 aaKnown RBP6.71□□□□□ -1.34
SMC1A-202ENST00000375340 KAT6AQ92794 2004 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 MYH11P35749 1972 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 KCNK1O00180 336 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 PRPF4O43172 522 aaKnown RBP eCLIP6.7□□□□□ -1.349e-8■■■■□ 26.3
SMC1A-202ENST00000375340 PAPSS1O43252 624 aaPredicted RBP6.7□□□□□ -1.34
SMC1A-202ENST00000375340 EDF1O60869 148 aaKnown RBP6.7□□□□□ -1.34
SMC1A-202ENST00000375340 FKBP6O75344 327 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 BAIAP3O94812 1187 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 PGM3O95394 542 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 ATICP31939 592 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 PDK3Q15120 406 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 VWA5B1Q5TIE3 1220 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 APLFQ8IW19 511 aaPredicted RBP6.7□□□□□ -1.34
SMC1A-202ENST00000375340 TRAPPC9Q96Q05 1148 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 SETD4Q9NVD3 440 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 MAGEB2O15479 319 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 MGEA5O60502 916 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 UGT1A9O60656 530 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 BNIP1Q12981 228 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 ZNF268Q14587 947 aaPredicted RBP6.7□□□□□ -1.34
SMC1A-202ENST00000375340 UGP2Q16851 508 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 FAM83EQ2M2I3 478 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 LPCAT2Q7L5N7 544 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 PCYOX1LQ8NBM8 494 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 GSTCDQ8NEC7 633 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 UGT1A7Q9HAW7 530 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 UGT1A10Q9HAW8 530 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 UGT1A8Q9HAW9 530 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 CDHR5Q9HBB8 845 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 CORO1CQ9ULV4 474 aaPredicted RBP6.7□□□□□ -1.34
SMC1A-202ENST00000375340 ASTN2O75129 1339 aaPredicted RBP6.7□□□□□ -1.34
SMC1A-202ENST00000375340 A0A096LPK6 155 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 DRG2P55039 364 aaKnown RBP6.7□□□□□ -1.34
SMC1A-202ENST00000375340 MPP3Q13368 585 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 FASTKQ14296 549 aaKnown RBP6.7□□□□□ -1.34
SMC1A-202ENST00000375340 SLC9A9Q8IVB4 645 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 PCDH20Q8N6Y1 951 aaKnown RBP6.7□□□□□ -1.34
SMC1A-202ENST00000375340 ACO2Q99798 780 aaKnown RBP6.7□□□□□ -1.34
SMC1A-202ENST00000375340 MRPL45Q9BRJ2 306 aaKnown RBP6.7□□□□□ -1.34
SMC1A-202ENST00000375340 C10orf120Q5SQS8 335 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.7□□□□□ -1.34
SMC1A-202ENST00000375340 PIGWQ7Z7B1 504 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 DHDDSQ86SQ9 333 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 EFCAB1Q9HAE3 211 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 ADAMTSL3P82987 1691 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 IGKV6D-41A0A0C4DH26 115 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 PRR5-ARHGAP8B1AHC4 643 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 RABGGTBP53611 331 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 ARHGAP8P85298 464 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 CAPSQ13938 189 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 NEDD8Q15843 81 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 PGS1Q32NB8 556 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 MFSD5Q6N075 450 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 SHCBP1Q8NEM2 672 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 LGMNQ99538 433 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 SEPHS2Q99611 448 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 FRMD8Q9BZ67 464 aaPredicted RBP6.7□□□□□ -1.34
SMC1A-202ENST00000375340 INSRRP14616 1297 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 GOT1P17174 413 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 TSPAN8P19075 237 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 ACO1P21399 889 aaKnown RBP6.7□□□□□ -1.34
SMC1A-202ENST00000375340 RAD51Q06609 339 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 VSTM1Q6UX27 236 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 FASTKD5Q7L8L6 764 aaKnown RBP6.7□□□□□ -1.34
SMC1A-202ENST00000375340 TFAP2DQ7Z6R9 452 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 HORMAD1Q86X24 394 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 DACH2Q96NX9 599 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 GID8Q9NWU2 228 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 ACTL7BQ9Y614 415 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 IGLV3-22A0A075B6J6 115 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 TIMM44O43615 452 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 APOA4P06727 396 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 C6orf222P0C671 652 aaPredicted RBP6.7□□□□□ -1.34
SMC1A-202ENST00000375340 ATP6V1B2P21281 511 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 FOLH1Q04609 750 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 GRIK4Q16099 956 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 UBAP2Q5T6F2 1119 aaKnown RBP6.7□□□□□ -1.34
SMC1A-202ENST00000375340 AGAP9Q5VTM2 703 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 B4GALNT2Q8NHY0 566 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 TUBGCP3Q96CW5 907 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 NDNQ99608 321 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 SNRNP25Q9BV90 132 aaKnown RBP6.7□□□□□ -1.34
SMC1A-202ENST00000375340 UBE2OQ9C0C9 1292 aaKnown RBP6.7□□□□□ -1.34
SMC1A-202ENST00000375340 DRG1Q9Y295 367 aaKnown RBP6.7□□□□□ -1.34
SMC1A-202ENST00000375340 MGRN1O60291 552 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 RASSF9O75901 435 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 PCYT1AP49585 367 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 ZNF143P52747 638 aaPredicted RBP6.7□□□□□ -1.34
SMC1A-202ENST00000375340 TBCELQ5QJ74 424 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 UNC5AQ6ZN44 842 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 RBM44Q6ZP01 1051 aaKnown RBP6.7□□□□□ -1.34
SMC1A-202ENST00000375340 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.7□□□□□ -1.34
SMC1A-202ENST00000375340 C12orf50Q8NA57 414 aaPredicted RBP6.7□□□□□ -1.34
SMC1A-202ENST00000375340 UCMAQ8WVF2 138 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 HIC2Q96JB3 615 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 BTBD7Q9P203 1132 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 PKP3Q9Y446 797 aa6.7□□□□□ -1.34
SMC1A-202ENST00000375340 H0YGN5 161 aa6.69□□□□□ -1.34
SMC1A-202ENST00000375340 NFYCQ13952 458 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms