RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 SLC4A5Q9BY07 1137 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 UBXN6Q9BZV1 441 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 VPS45Q9NRW7 570 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 TMLHEQ9NVH6 421 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 MAGED2Q9UNF1 606 aaPredicted RBP11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 PCDHGA5Q9Y5G8 931 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 ALG6Q9Y672 507 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 SAR1BQ9Y6B6 198 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 TCRBV5S1A1TA0A578 114 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 TMEM191CA6NGB0 347 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 CLDN5O00501 218 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 XPO1O14980 1071 aaKnown RBP11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 TADA3O75528 432 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 F11P03951 625 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 ERBB2P04626 1255 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 FAM200BP0CF97 657 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 KRT3P12035 628 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 PLA2G4AP47712 749 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 RPL34P49207 117 aaKnown RBP11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 RGS7P49802 495 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 CREB5Q02930 508 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 PPP1R15BQ5SWA1 713 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 OR6B2Q6IFH4 312 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 CC2D1AQ6P1N0 951 aaPredicted RBP11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 DCUN1D2Q6PH85 259 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 NT5DC3Q86UY8 548 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 XYLT1Q86Y38 959 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 C3orf20Q8ND61 904 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 C2orf15Q8WU43 125 aaKnown RBP11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 EZH1Q92800 747 aaPredicted RBP11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 PCED1BQ96HM7 432 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 ZC3H10Q96K80 434 aaKnown RBP11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 PKMYT1Q99640 499 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 P2RY13Q9BPV8 354 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 SELENOOQ9BVL4 669 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 TLR10Q9BXR5 811 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 DUSP15Q9H1R2 295 aaPredicted RBP11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 KIF9Q9HAQ2 790 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 TDP1Q9NUW8 608 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 IP6K2Q9UHH9 426 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 CDC23Q9UJX2 597 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 ANAPC7Q9UJX3 599 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 SNX12Q9UMY4 172 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 WNT6Q9Y6F9 365 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 ATRXP46100 2492 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 ANAPC1Q9H1A4 1944 aa11.41□□□□□ -0.58
HLA-DQA1-202ENST00000374949 TMEM110-MUSTN1A8MSY1 372 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 GOLGA8SH3BPF8 625 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 TULP2O00295 520 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 GIPC1O14908 333 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 AP1G2O75843 785 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 TCP1P17987 556 aaKnown RBP11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 DDX6P26196 483 aaKnown RBP eCLIP11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 GJA4P35212 333 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 SLC1A1P43005 524 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 NOVA1P51513 510 aaKnown RBP11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 GALK1P51570 392 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 AMPD2Q01433 879 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 SLC6A3Q01959 620 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 DMC1Q14565 340 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 PDGFRLQ15198 375 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 ELF2Q15723 593 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 CCDC142Q17RM4 750 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 C4orf50Q6ZRC1 276 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 MON1AQ86VX9 555 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 ZDHHC17Q8IUH5 632 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 SPATA2LQ8IUW3 424 aaPredicted RBP11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 ABCA7Q8IZY2 2146 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 CPA6Q8N4T0 437 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 CAMKK1Q8N5S9 505 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 KCTD13Q8WZ19 329 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 MRPS31Q92665 395 aaKnown RBP11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 SMARCD1Q96GM5 515 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 BTBD6Q96KE9 485 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 L2HGDHQ9H9P8 463 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 TRPC7Q9HCX4 862 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 TJP2Q9UDY2 1190 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 ZMYM5Q9UJ78 669 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 HYOU1Q9Y4L1 999 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 PCDHB5Q9Y5E4 795 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 BAHCC1Q9P281 2608 aa11.4□□□□□ -0.58
HLA-DQA1-202ENST00000374949 THADAQ6YHU6 1953 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 LNP1A1A4G5 178 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 C4orf47A7E2U8 309 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 MIF4GDA9UHW6 222 aaKnown RBP11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 C1QTNF9BB2RNN3 333 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 E5RJQ4 531 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 PIK3R2O00459 728 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 RIOK3O14730 519 aaKnown RBP11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 PROSCO94903 275 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 GJB6O95452 261 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 APBB3O95704 486 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 C1QTNF9P0C862 333 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 LCP1P13796 627 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 DRD1P21728 446 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 COMTP21964 271 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 GBP1P32455 592 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 MAP3K7CLP57077 242 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 RPL7AP62424 266 aaKnown RBP11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 ZNF252P-AS1Q0IIN9 211 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms