RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 ZBED5Q49AG3 693 aa21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 ZBTB46Q86UZ6 589 aa21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 MYO1HQ8N1T3 1032 aa21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 UBR7Q8N806 425 aa21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 ZNF219Q9P2Y4 722 aaPredicted RBP21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 PPP1R1BQ9UD71 204 aaPredicted RBP21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 TRPC5Q9UL62 973 aaPredicted RBP21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 SCN9AQ15858 1988 aa21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 KLHL41O60662 606 aa21.15■□□□□ 0.98
TMEFF1-201ENST00000374879 ENTPD3O75355 529 aa21.15■□□□□ 0.98
TMEFF1-201ENST00000374879 SPAG6O75602 509 aa21.15■□□□□ 0.98
TMEFF1-201ENST00000374879 NPM3O75607 178 aaKnown RBP21.15■□□□□ 0.98
TMEFF1-201ENST00000374879 LDHAP00338 332 aaKnown RBP21.15■□□□□ 0.98
TMEFF1-201ENST00000374879 CSH1P0DML2 217 aa21.15■□□□□ 0.98
TMEFF1-201ENST00000374879 CSH2P0DML3 217 aa21.15■□□□□ 0.98
TMEFF1-201ENST00000374879 MYL4P12829 197 aa21.15■□□□□ 0.98
TMEFF1-201ENST00000374879 HAUS6Q7Z4H7 955 aa21.15■□□□□ 0.98
TMEFF1-201ENST00000374879 USP13Q92995 863 aaPredicted RBP21.15■□□□□ 0.98
TMEFF1-201ENST00000374879 LXNQ9BS40 222 aa21.15■□□□□ 0.98
TMEFF1-201ENST00000374879 MMP10P09238 476 aa21.15■□□□□ 0.98
TMEFF1-201ENST00000374879 CCDC130P13994 396 aa21.15■□□□□ 0.98
TMEFF1-201ENST00000374879 RPS3AP61247 264 aaKnown RBP21.15■□□□□ 0.98
TMEFF1-201ENST00000374879 ESRRGP62508 458 aa21.15■□□□□ 0.98
TMEFF1-201ENST00000374879 LRRC38Q5VT99 294 aa21.15■□□□□ 0.98
TMEFF1-201ENST00000374879 PHF13Q86YI8 300 aaPredicted RBP21.15■□□□□ 0.98
TMEFF1-201ENST00000374879 FIBCD1Q8N539 461 aa21.15■□□□□ 0.98
TMEFF1-201ENST00000374879 ZNF597Q96LX8 424 aa21.15■□□□□ 0.98
TMEFF1-201ENST00000374879 MCEEQ96PE7 176 aa21.15■□□□□ 0.98
TMEFF1-201ENST00000374879 GBA3Q9H227 469 aa21.15■□□□□ 0.98
TMEFF1-201ENST00000374879 DHX33Q9H6R0 707 aaKnown RBP21.15■□□□□ 0.98
TMEFF1-201ENST00000374879 PLAC1Q9HBJ0 212 aa21.15■□□□□ 0.98
TMEFF1-201ENST00000374879 PNPLA3Q9NST1 481 aa21.15■□□□□ 0.98
TMEFF1-201ENST00000374879 NCKIPSDQ9NZQ3 722 aa21.15■□□□□ 0.98
TMEFF1-201ENST00000374879 CNOT11Q9UKZ1 510 aaKnown RBP21.15■□□□□ 0.98
TMEFF1-201ENST00000374879 PRPF19Q9UMS4 504 aaKnown RBP21.15■□□□□ 0.98
TMEFF1-201ENST00000374879 A0A1W2PPW3 197 aa21.14■□□□□ 0.98
TMEFF1-201ENST00000374879 C3orf70A6NLC5 250 aaPredicted RBP21.14■□□□□ 0.98
TMEFF1-201ENST00000374879 CFLARO15519 480 aa21.14■□□□□ 0.98
TMEFF1-201ENST00000374879 S100A1P23297 94 aa21.14■□□□□ 0.98
TMEFF1-201ENST00000374879 BMXP51813 675 aa21.14■□□□□ 0.98
TMEFF1-201ENST00000374879 PIGGQ5H8A4 983 aa21.14■□□□□ 0.98
TMEFF1-201ENST00000374879 LYSMD3Q7Z3D4 306 aa21.14■□□□□ 0.98
TMEFF1-201ENST00000374879 VCPIP1Q96JH7 1222 aa21.14■□□□□ 0.98
TMEFF1-201ENST00000374879 RPF2Q9H7B2 306 aaKnown RBP21.14■□□□□ 0.98
TMEFF1-201ENST00000374879 CLK4Q9HAZ1 481 aaKnown RBP21.14■□□□□ 0.98
TMEFF1-201ENST00000374879 TBC1D22BQ9NU19 505 aa21.14■□□□□ 0.98
TMEFF1-201ENST00000374879 COL11A2P13942 1736 aaPredicted RBP21.14■□□□□ 0.98
TMEFF1-201ENST00000374879 GAS7O60861 476 aa21.14■□□□□ 0.97
TMEFF1-201ENST00000374879 KRT38O76015 456 aa21.14■□□□□ 0.97
TMEFF1-201ENST00000374879 HSPA1LP34931 641 aa21.14■□□□□ 0.97
TMEFF1-201ENST00000374879 SERPINB5P36952 375 aa21.14■□□□□ 0.97
TMEFF1-201ENST00000374879 FKBP1AP62942 108 aaKnown RBP21.14■□□□□ 0.97
TMEFF1-201ENST00000374879 BNIP3Q12983 259 aa21.14■□□□□ 0.97
TMEFF1-201ENST00000374879 CEACAM7Q14002 265 aa21.14■□□□□ 0.97
TMEFF1-201ENST00000374879 SMTNL2Q2TAL5 461 aa21.14■□□□□ 0.97
TMEFF1-201ENST00000374879 FGD3Q5JSP0 725 aa21.14■□□□□ 0.97
TMEFF1-201ENST00000374879 DSELQ8IZU8 1212 aa21.14■□□□□ 0.97
TMEFF1-201ENST00000374879 ABRAQ8N0Z2 381 aa21.14■□□□□ 0.97
TMEFF1-201ENST00000374879 SH2D3AQ9BRG2 576 aa21.14■□□□□ 0.97
TMEFF1-201ENST00000374879 GIN1Q9NXP7 522 aa21.14■□□□□ 0.97
TMEFF1-201ENST00000374879 CORINQ9Y5Q5 1042 aa21.14■□□□□ 0.97
TMEFF1-201ENST00000374879 CCDC162PA2VCL2 907 aa21.13■□□□□ 0.97
TMEFF1-201ENST00000374879 GIPC1O14908 333 aa21.13■□□□□ 0.97
TMEFF1-201ENST00000374879 SLC16A4O15374 487 aa21.13■□□□□ 0.97
TMEFF1-201ENST00000374879 C8BP07358 591 aa21.13■□□□□ 0.97
TMEFF1-201ENST00000374879 SEPT6Q14141 434 aa21.13■□□□□ 0.97
TMEFF1-201ENST00000374879 PPM1LQ5SGD2 360 aa21.13■□□□□ 0.97
TMEFF1-201ENST00000374879 BNC2Q6ZN30 1099 aaPredicted RBP21.13■□□□□ 0.97
TMEFF1-201ENST00000374879 ENOSF1Q7L5Y1 443 aa21.13■□□□□ 0.97
TMEFF1-201ENST00000374879 PDCD6IPQ8WUM4 868 aaKnown RBP21.13■□□□□ 0.97
TMEFF1-201ENST00000374879 C1orf112Q9NSG2 853 aa21.13■□□□□ 0.97
TMEFF1-201ENST00000374879 EMCNQ9ULC0 261 aa21.13■□□□□ 0.97
TMEFF1-201ENST00000374879 CNTNAP2Q9UHC6 1331 aa21.13■□□□□ 0.97
TMEFF1-201ENST00000374879 CYP2C9P11712 490 aa21.13■□□□□ 0.97
TMEFF1-201ENST00000374879 IKBKEQ14164 716 aa21.13■□□□□ 0.97
TMEFF1-201ENST00000374879 CEP55Q53EZ4 464 aa21.13■□□□□ 0.97
TMEFF1-201ENST00000374879 IFNLR1Q8IU57 520 aaPredicted RBP21.13■□□□□ 0.97
TMEFF1-201ENST00000374879 HM13Q8TCT9 377 aa21.13■□□□□ 0.97
TMEFF1-201ENST00000374879 CGREF1Q99674 301 aa21.13■□□□□ 0.97
TMEFF1-201ENST00000374879 OSBPL11Q9BXB4 747 aa21.13■□□□□ 0.97
TMEFF1-201ENST00000374879 DRC3Q9H069 523 aa21.13■□□□□ 0.97
TMEFF1-201ENST00000374879 ZC3H7BQ9UGR2 993 aaKnown RBP21.13■□□□□ 0.97
TMEFF1-201ENST00000374879 IQCJ-SCHIP1C9J366 451 aaPredicted RBP21.12■□□□□ 0.97
TMEFF1-201ENST00000374879 H3BMQ9 156 aa21.12■□□□□ 0.97
TMEFF1-201ENST00000374879 MCF2LO15068 1137 aa21.12■□□□□ 0.97
TMEFF1-201ENST00000374879 PABPC1P11940 636 aaKnown RBP21.12■□□□□ 0.97
TMEFF1-201ENST00000374879 FGFR3P22607 806 aa21.12■□□□□ 0.97
TMEFF1-201ENST00000374879 GABRB2P47870 512 aa21.12■□□□□ 0.97
TMEFF1-201ENST00000374879 SLC10A2Q12908 348 aaPredicted RBP21.12■□□□□ 0.97
TMEFF1-201ENST00000374879 NR1D2Q14995 579 aa21.12■□□□□ 0.97
TMEFF1-201ENST00000374879 KCNT1Q5JUK3 1230 aa21.12■□□□□ 0.97
TMEFF1-201ENST00000374879 IL23RQ5VWK5 629 aa21.12■□□□□ 0.97
TMEFF1-201ENST00000374879 SETD3Q86TU7 594 aaPredicted RBP21.12■□□□□ 0.97
TMEFF1-201ENST00000374879 TANKQ92844 425 aa21.12■□□□□ 0.97
TMEFF1-201ENST00000374879 COG8Q96MW5 612 aa21.12■□□□□ 0.97
TMEFF1-201ENST00000374879 SLC8A2Q9UPR5 921 aa21.12■□□□□ 0.97
TMEFF1-201ENST00000374879 ZNF701M0R085 212 aaPredicted RBP21.12■□□□□ 0.97
TMEFF1-201ENST00000374879 CSPG5O95196 566 aa21.12■□□□□ 0.97
TMEFF1-201ENST00000374879 PRKCHP24723 683 aa21.12■□□□□ 0.97
TMEFF1-201ENST00000374879 YWHAZP63104 245 aaKnown RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms