RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 LILRA4P59901 499 aa16.08■□□□□ 0.16
CCDC40-202ENST00000374876 PDK2Q15119 407 aa16.08■□□□□ 0.16
CCDC40-202ENST00000374876 NOMO1Q15155 1222 aa16.08■□□□□ 0.16
CCDC40-202ENST00000374876 RASA2Q15283 850 aa16.08■□□□□ 0.16
CCDC40-202ENST00000374876 MSS51Q4VC12 460 aa16.08■□□□□ 0.16
CCDC40-202ENST00000374876 BOLA3Q53S33 107 aa16.08■□□□□ 0.16
CCDC40-202ENST00000374876 OLFML1Q6UWY5 402 aa16.08■□□□□ 0.16
CCDC40-202ENST00000374876 SPATA21Q7Z572 469 aa16.08■□□□□ 0.16
CCDC40-202ENST00000374876 ADGRD2Q7Z7M1 963 aa16.08■□□□□ 0.16
CCDC40-202ENST00000374876 TTC30AQ86WT1 665 aa16.08■□□□□ 0.16
CCDC40-202ENST00000374876 PALM2Q8IXS6 379 aa16.08■□□□□ 0.16
CCDC40-202ENST00000374876 RNF168Q8IYW5 571 aaPredicted RBP16.08■□□□□ 0.16
CCDC40-202ENST00000374876 LRRC52Q8N7C0 313 aa16.08■□□□□ 0.16
CCDC40-202ENST00000374876 FBXO36Q8NEA4 188 aa16.08■□□□□ 0.16
CCDC40-202ENST00000374876 LMCD1Q9NZU5 365 aa16.08■□□□□ 0.16
CCDC40-202ENST00000374876 CLUHO75153 1309 aa16.08■□□□□ 0.16
CCDC40-202ENST00000374876 SF3B1O75533 1304 aaKnown RBP eCLIP16.08■□□□□ 0.16
CCDC40-202ENST00000374876 ATG2AQ2TAZ0 1938 aa16.08■□□□□ 0.16
CCDC40-202ENST00000374876 SCN1AP35498 2009 aa16.08■□□□□ 0.16
CCDC40-202ENST00000374876 TCRBV7S3A2A0A539 114 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 E7ESA3 106 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 H7C0C1 242 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 DPYSL4O14531 572 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 TMEM63AO94886 807 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 CTSAP10619 480 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 SSTR1P30872 391 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 ATP5OP48047 213 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 SLC6A3Q01959 620 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 USP41Q3LFD5 358 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 BBS9Q3SYG4 887 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 PKDCCQ504Y2 493 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 TCEAL5Q5H9L2 206 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 EFHC2Q5JST6 749 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 RTP2Q5QGT7 225 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 KIAA1841Q6NSI8 718 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 C1orf228Q6PIY5 440 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 C3orf62Q6ZUJ4 267 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 SCUBE3Q8IX30 993 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 OR6B3Q8NGW1 331 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 FAM172AQ8WUF8 416 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 RNF157Q96PX1 679 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 PLCD4Q9BRC7 762 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 SLC4A5Q9BY07 1137 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 IGFLR1Q9H665 355 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 SLC40A1Q9NP59 571 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 FETUBQ9UGM5 382 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 RABGEF1Q9UJ41 708 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 COL6A3P12111 3177 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 C2orf71A6NGG8 1288 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 GSTA1P08263 222 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 TKTP29401 623 aaKnown RBP16.07■□□□□ 0.16
CCDC40-202ENST00000374876 SLC18A1P54219 525 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 WDR4P57081 412 aaKnown RBP16.07■□□□□ 0.16
CCDC40-202ENST00000374876 SPARCL1Q14515 664 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 KLHL38Q2WGJ6 581 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 KIAA0319Q5VV43 1072 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 PRSS55Q6UWB4 352 aaPredicted RBP16.07■□□□□ 0.16
CCDC40-202ENST00000374876 TMEM110Q86TL2 294 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 C4orf33Q8N1A6 199 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 MRPL43Q8N983 215 aaKnown RBP16.07■□□□□ 0.16
CCDC40-202ENST00000374876 KIF9Q9HAQ2 790 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 ARL2BPQ9Y2Y0 163 aa16.07■□□□□ 0.16
CCDC40-202ENST00000374876 TIMM13Q9Y5L4 95 aaPredicted RBP16.07■□□□□ 0.16
CCDC40-202ENST00000374876 SPTBN5Q9NRC6 3674 aaKnown RBP16.06■□□□□ 0.16
CCDC40-202ENST00000374876 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.06■□□□□ 0.16
CCDC40-202ENST00000374876 DNAJC8O75937 253 aaPredicted RBP16.06■□□□□ 0.16
CCDC40-202ENST00000374876 MTM1Q13496 603 aa16.06■□□□□ 0.16
CCDC40-202ENST00000374876 UNC93AQ86WB7 457 aa16.06■□□□□ 0.16
CCDC40-202ENST00000374876 ZDHHC17Q8IUH5 632 aa16.06■□□□□ 0.16
CCDC40-202ENST00000374876 FBF1Q8TES7 1133 aa16.06■□□□□ 0.16
CCDC40-202ENST00000374876 SLC35F5Q8WV83 523 aa16.06■□□□□ 0.16
CCDC40-202ENST00000374876 TEKT4Q8WW24 435 aa16.06■□□□□ 0.16
CCDC40-202ENST00000374876 TTPALQ9BTX7 342 aa16.06■□□□□ 0.16
CCDC40-202ENST00000374876 HERC2P3Q9BVR0 1158 aa16.06■□□□□ 0.16
CCDC40-202ENST00000374876 NSUN3Q9H649 340 aaKnown RBP16.06■□□□□ 0.16
CCDC40-202ENST00000374876 ACSS3Q9H6R3 686 aa16.06■□□□□ 0.16
CCDC40-202ENST00000374876 MRPL17Q9NRX2 175 aaKnown RBP16.06■□□□□ 0.16
CCDC40-202ENST00000374876 ABCF3Q9NUQ8 709 aa16.06■□□□□ 0.16
CCDC40-202ENST00000374876 SLC12A4Q9UP95 1085 aa16.06■□□□□ 0.16
CCDC40-202ENST00000374876 A8MXQ7 604 aa16.06■□□□□ 0.16
CCDC40-202ENST00000374876 APOL1O14791 398 aa16.06■□□□□ 0.16
CCDC40-202ENST00000374876 RASSF9O75901 435 aa16.06■□□□□ 0.16
CCDC40-202ENST00000374876 ASMTLO95671 621 aa16.06■□□□□ 0.16
CCDC40-202ENST00000374876 URODP06132 367 aa16.06■□□□□ 0.16
CCDC40-202ENST00000374876 RPL17P18621 184 aaKnown RBP16.06■□□□□ 0.16
CCDC40-202ENST00000374876 TAC1P20366 129 aa16.06■□□□□ 0.16
CCDC40-202ENST00000374876 CA4P22748 312 aa16.06■□□□□ 0.16
CCDC40-202ENST00000374876 FOXN2P32314 431 aa16.06■□□□□ 0.16
CCDC40-202ENST00000374876 GBP2P32456 591 aaPredicted RBP16.06■□□□□ 0.16
CCDC40-202ENST00000374876 GLUD2P49448 558 aa16.06■□□□□ 0.16
CCDC40-202ENST00000374876 NRLP54845 237 aa16.06■□□□□ 0.16
CCDC40-202ENST00000374876 DSG1Q02413 1049 aa16.06■□□□□ 0.16
CCDC40-202ENST00000374876 FAM133BQ5BKY9 247 aaKnown RBP16.06■□□□□ 0.16
CCDC40-202ENST00000374876 ZC3H12AQ5D1E8 599 aaKnown RBP16.06■□□□□ 0.16
CCDC40-202ENST00000374876 DSTYKQ6XUX3 929 aa16.06■□□□□ 0.16
CCDC40-202ENST00000374876 PLD5Q8N7P1 536 aa16.06■□□□□ 0.16
CCDC40-202ENST00000374876 GRAMD1AQ96CP6 724 aa16.06■□□□□ 0.16
CCDC40-202ENST00000374876 TBCBQ99426 244 aa16.06■□□□□ 0.16
CCDC40-202ENST00000374876 NCAPGQ9BPX3 1015 aa16.06■□□□□ 0.16
CCDC40-202ENST00000374876 PITPNM3Q9BZ71 974 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms