RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 SSU72Q9NP77 194 aaKnown RBP17.58■□□□□ 0.4
RXRB-201ENST00000374680 PIGVQ9NUD9 493 aa17.58■□□□□ 0.4
RXRB-201ENST00000374680 TAS2R1Q9NYW7 299 aa17.58■□□□□ 0.4
RXRB-201ENST00000374680 FETUBQ9UGM5 382 aa17.58■□□□□ 0.4
RXRB-201ENST00000374680 TPP1O14773 563 aa17.57■□□□□ 0.4
RXRB-201ENST00000374680 PDHA1P08559 390 aa17.57■□□□□ 0.4
RXRB-201ENST00000374680 USP17L7P0C7H9 530 aa17.57■□□□□ 0.4
RXRB-201ENST00000374680 TKTL1P51854 596 aa17.57■□□□□ 0.4
RXRB-201ENST00000374680 DEUP1Q05D60 604 aa17.57■□□□□ 0.4
RXRB-201ENST00000374680 EML3Q32P44 896 aa17.57■□□□□ 0.4
RXRB-201ENST00000374680 KIAA0319Q5VV43 1072 aa17.57■□□□□ 0.4
RXRB-201ENST00000374680 TNS4Q8IZW8 715 aa17.57■□□□□ 0.4
RXRB-201ENST00000374680 STKLD1Q8NE28 680 aa17.57■□□□□ 0.4
RXRB-201ENST00000374680 WDR60Q8WVS4 1066 aa17.57■□□□□ 0.4
RXRB-201ENST00000374680 UNKQ9C0B0 810 aaKnown RBP17.57■□□□□ 0.4
RXRB-201ENST00000374680 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.57■□□□□ 0.42e-6■■■■■ 33.3
RXRB-201ENST00000374680 FLRT1Q9NZU1 646 aa17.57■□□□□ 0.4
RXRB-201ENST00000374680 KLHL8Q9P2G9 620 aaPredicted RBP17.57■□□□□ 0.4
RXRB-201ENST00000374680 IPPQ9Y573 584 aa17.57■□□□□ 0.4
RXRB-201ENST00000374680 MEI4A8MW99 385 aa17.57■□□□□ 0.4
RXRB-201ENST00000374680 SMAPO00193 183 aa17.57■□□□□ 0.4
RXRB-201ENST00000374680 CCDC6Q16204 474 aa17.57■□□□□ 0.4
RXRB-201ENST00000374680 LDLRAD1Q5T700 205 aa17.57■□□□□ 0.4
RXRB-201ENST00000374680 N4BP2L1Q5TBK1 243 aaPredicted RBP17.57■□□□□ 0.4
RXRB-201ENST00000374680 POU5F2Q8N7G0 328 aa17.57■□□□□ 0.4
RXRB-201ENST00000374680 DNAAF3Q8N9W5 541 aa17.57■□□□□ 0.4
RXRB-201ENST00000374680 SHKBP1Q8TBC3 707 aa17.57■□□□□ 0.4
RXRB-201ENST00000374680 CELF6Q96J87 481 aaKnown RBP17.57■□□□□ 0.4
RXRB-201ENST00000374680 ULBP1Q9BZM6 244 aa17.57■□□□□ 0.4
RXRB-201ENST00000374680 CNTN3Q9P232 1028 aa17.57■□□□□ 0.4
RXRB-201ENST00000374680 YJEFN3A6XGL0 299 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 E7ENQ6 273 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 PIRO00625 290 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 GCATO75600 419 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 KRT36O76013 467 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 PRKCHP24723 683 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 MATKP42679 507 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 CACNA2D1P54289 1103 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 FASTKD1Q53R41 847 aaKnown RBP17.56■□□□□ 0.4
RXRB-201ENST00000374680 TLDC1Q6P9B6 456 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 TLK2Q86UE8 772 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 SLC25A41Q8N5S1 370 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 PAAF1Q9BRP4 392 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 PLEKHA5Q9HAU0 1116 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 RNPEPL1Q9HAU8 725 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 KRT82Q9NSB4 513 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 RPS6KL1Q9Y6S9 549 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 MYBPHLA2RUH7 354 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 GSC2O15499 205 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 SPAG6O75602 509 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 NCAM1P13591 858 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 MFSD10Q14728 455 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 VWA5B1Q5TIE3 1220 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 GPRIN1Q7Z2K8 1008 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 PLEKHH3Q7Z736 793 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 ZNF567Q8N184 647 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 EFCAB3Q8N7B9 438 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 LRRC52Q8N7C0 313 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 GAD1Q99259 594 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 CAB39LQ9H9S4 337 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 TMEM30AQ9NV96 361 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 PCDHA11Q9Y5I1 949 aa17.56■□□□□ 0.4
RXRB-201ENST00000374680 CASTOR2A6NHX0 329 aa17.55■□□□□ 0.4
RXRB-201ENST00000374680 PTPN1P18031 435 aaKnown RBP17.55■□□□□ 0.4
RXRB-201ENST00000374680 PTPN9P43378 593 aa17.55■□□□□ 0.4
RXRB-201ENST00000374680 STX3Q13277 289 aa17.55■□□□□ 0.4
RXRB-201ENST00000374680 DLG2Q15700 870 aa17.55■□□□□ 0.4
RXRB-201ENST00000374680 UNC93AQ86WB7 457 aa17.55■□□□□ 0.4
RXRB-201ENST00000374680 TTC39CQ8N584 583 aa17.55■□□□□ 0.4
RXRB-201ENST00000374680 RTP4Q96DX8 246 aa17.55■□□□□ 0.4
RXRB-201ENST00000374680 FAM161BQ96MY7 647 aa17.55■□□□□ 0.4
RXRB-201ENST00000374680 QKIQ96PU8 341 aaKnown RBP eCLIP17.55■□□□□ 0.42e-8■■□□□ 11.7
RXRB-201ENST00000374680 BTBD10Q9BSF8 475 aa17.55■□□□□ 0.4
RXRB-201ENST00000374680 SYT17Q9BSW7 474 aa17.55■□□□□ 0.4
RXRB-201ENST00000374680 SIK2Q9H0K1 926 aa17.55■□□□□ 0.4
RXRB-201ENST00000374680 TXNDC16Q9P2K2 825 aa17.55■□□□□ 0.4
RXRB-201ENST00000374680 NUDT5Q9UKK9 219 aa17.55■□□□□ 0.4
RXRB-201ENST00000374680 FZD10Q9ULW2 581 aa17.55■□□□□ 0.4
RXRB-201ENST00000374680 G3BP2Q9UN86 482 aaKnown RBP17.55■□□□□ 0.4
RXRB-201ENST00000374680 MTO1Q9Y2Z2 717 aaKnown RBP17.55■□□□□ 0.4
RXRB-201ENST00000374680 LAMA3Q16787 3333 aa17.55■□□□□ 0.4
RXRB-201ENST00000374680 A0A0A0MRY4 1105 aa17.55■□□□□ 0.4
RXRB-201ENST00000374680 I6L893 689 aaPredicted RBP17.55■□□□□ 0.4
RXRB-201ENST00000374680 EEF2KO00418 725 aaKnown RBP17.55■□□□□ 0.4
RXRB-201ENST00000374680 STRNO43815 780 aa17.55■□□□□ 0.4
RXRB-201ENST00000374680 CCDC22O60826 627 aa17.55■□□□□ 0.4
RXRB-201ENST00000374680 SETSIPP0DME0 302 aa17.55■□□□□ 0.4
RXRB-201ENST00000374680 SNX16P57768 344 aa17.55■□□□□ 0.4
RXRB-201ENST00000374680 ARHGAP17Q68EM7 881 aa17.55■□□□□ 0.4
RXRB-201ENST00000374680 PAQR9Q6ZVX9 377 aa17.55■□□□□ 0.4
RXRB-201ENST00000374680 USP50Q70EL3 339 aaPredicted RBP17.55■□□□□ 0.4
RXRB-201ENST00000374680 NT5DC4Q86YG4 428 aa17.55■□□□□ 0.4
RXRB-201ENST00000374680 INPP5DQ92835 1189 aa17.55■□□□□ 0.4
RXRB-201ENST00000374680 SPATA13Q96N96 652 aa17.55■□□□□ 0.4
RXRB-201ENST00000374680 AGAP2Q99490 1192 aa17.55■□□□□ 0.4
RXRB-201ENST00000374680 DDX43Q9NXZ2 648 aaKnown RBP17.55■□□□□ 0.4
RXRB-201ENST00000374680 SDR42E2A6NKP2 422 aa17.54■□□□□ 0.4
RXRB-201ENST00000374680 TPBGLP0DKB5 382 aa17.54■□□□□ 0.4
RXRB-201ENST00000374680 SRGAP2BP0DMP2 458 aa17.54■□□□□ 0.4
RXRB-201ENST00000374680 CALB2P22676 271 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms