RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.04■□□□□ 0.16
TMEM50A-201ENST00000374358 WASF2Q9Y6W5 498 aa16.04■□□□□ 0.16
TMEM50A-201ENST00000374358 A0A0A0MRY4 1105 aa16.04■□□□□ 0.16
TMEM50A-201ENST00000374358 SMIM28A0A1B0GU29 152 aa16.04■□□□□ 0.16
TMEM50A-201ENST00000374358 PRR5-ARHGAP8B1AHC4 643 aa16.04■□□□□ 0.16
TMEM50A-201ENST00000374358 ERVK-10P10266 1014 aa16.04■□□□□ 0.16
TMEM50A-201ENST00000374358 MLH1P40692 756 aa16.04■□□□□ 0.16
TMEM50A-201ENST00000374358 ARHGAP8P85298 464 aa16.04■□□□□ 0.16
TMEM50A-201ENST00000374358 FASTKD1Q53R41 847 aaKnown RBP16.04■□□□□ 0.16
TMEM50A-201ENST00000374358 N4BP2L1Q5TBK1 243 aaPredicted RBP16.04■□□□□ 0.16
TMEM50A-201ENST00000374358 OSTM1Q86WC4 334 aa16.04■□□□□ 0.16
TMEM50A-201ENST00000374358 NME8Q8N427 588 aa16.04■□□□□ 0.16
TMEM50A-201ENST00000374358 ARNTL2Q8WYA1 636 aa16.04■□□□□ 0.16
TMEM50A-201ENST00000374358 FAM161BQ96MY7 647 aa16.04■□□□□ 0.16
TMEM50A-201ENST00000374358 SPATA13Q96N96 652 aa16.04■□□□□ 0.16
TMEM50A-201ENST00000374358 CAPN14A8MX76 684 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 PDHXO00330 501 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 CAPN9O14815 690 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 TBX10O75333 385 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 DGKIO75912 1065 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 CRHR1P34998 444 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 ARL4AP40617 200 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 THOC5Q13769 683 aaKnown RBP16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 PDE1CQ14123 709 aaPredicted RBP16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 ATG16L1Q676U5 607 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 DPP9Q86TI2 863 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 ZNF410Q86VK4 478 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 LRRC52Q8N7C0 313 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 ARRDC4Q8NCT1 418 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 DNAJB3Q8WWF6 145 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 SNX25Q9H3E2 840 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 DCLRE1BQ9H816 532 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 XAB2Q9HCS7 855 aaKnown RBP16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 NMRK1Q9NWW6 199 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 KCNK4Q9NYG8 393 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 FZD10Q9ULW2 581 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 FAM72CH0Y354 149 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 SNNO75324 88 aaPredicted RBP16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 ARRB2P32121 409 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 PGM1P36871 562 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 SNAPC2Q13487 334 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 CCDC6Q16204 474 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 FAM72AQ5TYM5 149 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 FAM72DQ6L9T8 149 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 NOTUMQ6P988 496 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 ALKAL1Q6UXT8 129 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 PACS1Q6VY07 963 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 UNC93AQ86WB7 457 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 FAM72BQ86X60 149 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 CRLF3Q8IUI8 442 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 PPP1R14CQ8TAE6 165 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 AZIN2Q96A70 460 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 PGBD4Q96DM1 585 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 GCOM2Q9BZD3 368 aaPredicted RBP16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 SHCBP1LQ9BZQ2 653 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 PRDM12Q9H4Q4 367 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 PLEKHA5Q9HAU0 1116 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 XPNPEP3Q9NQH7 507 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 ANLNQ9NQW6 1124 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 RALGAPA2Q2PPJ7 1873 aa16.03■□□□□ 0.16
TMEM50A-201ENST00000374358 MATKP42679 507 aa16.02■□□□□ 0.16
TMEM50A-201ENST00000374358 NR2C2P49116 596 aa16.02■□□□□ 0.16
TMEM50A-201ENST00000374358 STX3Q13277 289 aa16.02■□□□□ 0.16
TMEM50A-201ENST00000374358 KRT72Q14CN4 511 aa16.02■□□□□ 0.16
TMEM50A-201ENST00000374358 CMC1Q7Z7K0 106 aa16.02■□□□□ 0.16
TMEM50A-201ENST00000374358 ZDHHC17Q8IUH5 632 aa16.02■□□□□ 0.16
TMEM50A-201ENST00000374358 SLC25A41Q8N5S1 370 aa16.02■□□□□ 0.16
TMEM50A-201ENST00000374358 SHCBP1Q8NEM2 672 aa16.02■□□□□ 0.16
TMEM50A-201ENST00000374358 RNF139Q8WU17 664 aa16.02■□□□□ 0.16
TMEM50A-201ENST00000374358 EMID1Q96A84 441 aaPredicted RBP16.02■□□□□ 0.16
TMEM50A-201ENST00000374358 LRRC42Q9Y546 428 aa16.02■□□□□ 0.16
TMEM50A-201ENST00000374358 I6L893 689 aaPredicted RBP16.02■□□□□ 0.16
TMEM50A-201ENST00000374358 PIRO00625 290 aa16.02■□□□□ 0.16
TMEM50A-201ENST00000374358 DYNC1LI2O43237 492 aaPredicted RBP16.02■□□□□ 0.16
TMEM50A-201ENST00000374358 HNRNPCL1O60812 293 aaKnown RBP16.02■□□□□ 0.16
TMEM50A-201ENST00000374358 IL1BP01584 269 aa16.02■□□□□ 0.16
TMEM50A-201ENST00000374358 NIPAL4Q0D2K0 466 aa16.02■□□□□ 0.16
TMEM50A-201ENST00000374358 ZNF567Q8N184 647 aa16.02■□□□□ 0.16
TMEM50A-201ENST00000374358 APPL2Q8NEU8 664 aa16.02■□□□□ 0.16
TMEM50A-201ENST00000374358 MTBPQ96DY7 904 aa16.02■□□□□ 0.16
TMEM50A-201ENST00000374358 ZFP42Q96MM3 310 aa16.02■□□□□ 0.16
TMEM50A-201ENST00000374358 PIGVQ9NUD9 493 aa16.02■□□□□ 0.16
TMEM50A-201ENST00000374358 DOCK3Q8IZD9 2030 aa16.02■□□□□ 0.16
TMEM50A-201ENST00000374358 M0QYT0 321 aa16.02■□□□□ 0.15
TMEM50A-201ENST00000374358 SMIM10L2AP0DMW4 78 aa16.02■□□□□ 0.15
TMEM50A-201ENST00000374358 SMIM10L2BP0DMW5 78 aa16.02■□□□□ 0.15
TMEM50A-201ENST00000374358 CYP2C9P11712 490 aa16.02■□□□□ 0.15
TMEM50A-201ENST00000374358 ZFXP17010 805 aaPredicted RBP16.02■□□□□ 0.15
TMEM50A-201ENST00000374358 PGGT1BP53609 377 aa16.02■□□□□ 0.15
TMEM50A-201ENST00000374358 WASHC5Q12768 1159 aa16.02■□□□□ 0.15
TMEM50A-201ENST00000374358 DGKDQ16760 1214 aa16.02■□□□□ 0.15
TMEM50A-201ENST00000374358 MUM1Q2TAK8 710 aa16.02■□□□□ 0.15
TMEM50A-201ENST00000374358 DUSP28Q4G0W2 176 aa16.02■□□□□ 0.15
TMEM50A-201ENST00000374358 VWA5B1Q5TIE3 1220 aa16.02■□□□□ 0.15
TMEM50A-201ENST00000374358 SNX30Q5VWJ9 437 aa16.02■□□□□ 0.15
TMEM50A-201ENST00000374358 ANO7Q6IWH7 933 aa16.02■□□□□ 0.15
TMEM50A-201ENST00000374358 HACE1Q8IYU2 909 aa16.02■□□□□ 0.15
TMEM50A-201ENST00000374358 POU5F2Q8N7G0 328 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms