RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 PDZK1Q5T2W1 519 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 HMBOX1Q6NT76 420 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 ERICH5Q6P6B1 374 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 GALNT18Q6P9A2 607 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 CCDC117Q8IWD4 279 aaPredicted RBP6.76□□□□□ -1.33
CHD6-203ENST00000373233 CCDC36Q8IYA8 594 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 KCTD6Q8NC69 237 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 PYDC1Q8WXC3 89 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 SHISA4Q96DD7 197 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 IRF2BPLQ9H1B7 796 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 UBA2Q9UBT2 640 aaPredicted RBP6.76□□□□□ -1.33
CHD6-203ENST00000373233 SLC13A4Q9UKG4 626 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 UBIAD1Q9Y5Z9 338 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 COL11A1P12107 1806 aaPredicted RBP6.76□□□□□ -1.33
CHD6-203ENST00000373233 SSNA1O43805 119 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 EXTL3O43909 919 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 SKIV2L2P42285 1042 aaKnown RBP6.75□□□□□ -1.33
CHD6-203ENST00000373233 ZNF844Q08AG5 666 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 CSTF3Q12996 717 aaKnown RBP6.75□□□□□ -1.33
CHD6-203ENST00000373233 QPRTQ15274 297 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 ZNF284Q2VY69 593 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 ARMCX2Q7L311 632 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 RIOX2Q8IUF8 465 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 POU5F2Q8N7G0 328 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 NSMCE3Q96MG7 304 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 ZFYVE28Q9HCC9 887 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 TBCCD1Q9NVR7 557 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 ADAM30Q9UKF2 790 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 PCDHGA10Q9Y5H3 936 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 ZNF286BP0CG31 522 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 ACADVLP49748 655 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 CLK2P49760 499 aaKnown RBP6.75□□□□□ -1.33
CHD6-203ENST00000373233 SREBF2Q12772 1141 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 DDX50Q9BQ39 737 aaKnown RBP6.75□□□□□ -1.33
CHD6-203ENST00000373233 SIK3Q9Y2K2 1263 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 SSU72P8A0A1W2PR75 194 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 H3BNX3 289 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 EFCAB14O75071 495 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 MARSP56192 900 aaKnown RBP6.75□□□□□ -1.33
CHD6-203ENST00000373233 KYAT1Q16773 422 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 DNAJC24Q6P3W2 148 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 DUSP9Q99956 384 aaKnown RBP6.75□□□□□ -1.33
CHD6-203ENST00000373233 C17orf75Q9HAS0 396 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 ERAP1Q9NZ08 941 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 HEY2Q9UBP5 337 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 SQORQ9Y6N5 450 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 TPTEP56180 551 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 KLHDC7AQ5VTJ3 777 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 IER5Q5VY09 327 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 C4orf19Q8IY42 314 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 ZC3H10Q96K80 434 aaKnown RBP6.75□□□□□ -1.33
CHD6-203ENST00000373233 SLC13A1Q9BZW2 595 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 ADAM22Q9P0K1 906 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 FADS3Q9Y5Q0 445 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 FYNP06241 537 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 TBXAS1P24557 533 aaPredicted RBP6.75□□□□□ -1.33
CHD6-203ENST00000373233 ECM1Q16610 540 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 C7orf31Q8N865 590 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 TDRD5Q8NAT2 981 aaKnown RBP6.75□□□□□ -1.33
CHD6-203ENST00000373233 OR7A2PQ8NGA2 310 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 FAM162AQ96A26 154 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 SYT17Q9BSW7 474 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 HDHD2Q9H0R4 259 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 PABPC3Q9H361 631 aaKnown RBP6.75□□□□□ -1.33
CHD6-203ENST00000373233 PCMTD2Q9NV79 361 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 NUP50Q9UKX7 468 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 GIT1Q9Y2X7 761 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 TALDO1P37837 337 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 SOX10P56693 466 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 STK32CQ86UX6 486 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 PHC2Q8IXK0 858 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 MYPNQ86TC9 1320 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 TMEM150BA6NC51 233 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 SLC5A3P53794 718 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 HPCAP84074 193 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 TRAF3Q13114 568 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 TMEM132BQ14DG7 1078 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 DGKDQ16760 1214 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 PURBQ96QR8 312 aaKnown RBP6.75□□□□□ -1.33
CHD6-203ENST00000373233 YME1L1Q96TA2 773 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 USP2O75604 605 aaPredicted RBP6.75□□□□□ -1.33
CHD6-203ENST00000373233 ZBTB11O95625 1053 aaPredicted RBP6.75□□□□□ -1.33
CHD6-203ENST00000373233 PABPC1P11940 636 aaKnown RBP6.75□□□□□ -1.33
CHD6-203ENST00000373233 TMEM270Q6UE05 265 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 CHP1Q99653 195 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 GCOM2Q9BZD3 368 aaPredicted RBP6.75□□□□□ -1.33
CHD6-203ENST00000373233 PEX1O43933 1283 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 IL18RAPO95256 599 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 CYP2C8P10632 490 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 UBA1P22314 1058 aaKnown RBP6.75□□□□□ -1.33
CHD6-203ENST00000373233 ZNF200P98182 395 aaPredicted RBP6.75□□□□□ -1.33
CHD6-203ENST00000373233 HSF2Q03933 536 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 RASA2Q15283 850 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 VSIG10LQ86VR7 867 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 DEFB107AQ8IZN7 70 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 SERPINB12Q96P63 405 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 VPS11Q9H270 941 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 IL1RL2Q9HB29 575 aa6.75□□□□□ -1.33
CHD6-203ENST00000373233 CLOCKO15516 846 aa6.74□□□□□ -1.33
CHD6-203ENST00000373233 TPST1O60507 370 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms