RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 RAMP2O60895 175 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 ZCCHC18P0CG32 403 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 ARP10275 920 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 MYL4P12829 197 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 DPEP1P16444 411 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 PIK3CGP48736 1102 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 BACE1P56817 501 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 ZNF618Q5T7W0 954 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 ABRAQ8N0Z2 381 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 LZTR1Q8N653 840 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 ANKRD27Q96NW4 1050 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 SYT15Q9BQS2 421 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 DDX43Q9NXZ2 648 aaKnown RBP11.8□□□□□ -0.52
VCL-202ENST00000372755 MEI4A8MW99 385 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 GP5P40197 560 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 SKP1P63208 163 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 CSNK2BP67870 215 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 ZNF720Q7Z2F6 126 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 FBXO16Q8IX29 292 aaPredicted RBP11.8□□□□□ -0.52
VCL-202ENST00000372755 SYTL1Q8IYJ3 562 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 DEFB107AQ8IZN7 70 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 MCOLN3Q8TDD5 553 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 ACTRT2Q8TDY3 377 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 ZKSCAN4Q969J2 545 aaPredicted RBP11.8□□□□□ -0.52
VCL-202ENST00000372755 CATSPER2Q96P56 530 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 ASB2Q96Q27 587 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 A1CFQ9NQ94 594 aaKnown RBP11.8□□□□□ -0.52
VCL-202ENST00000372755 PXMP2Q9NR77 195 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 AP3M1Q9Y2T2 418 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 ATP12AP54707 1039 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 R3HDM1Q15032 1099 aaKnown RBP11.8□□□□□ -0.52
VCL-202ENST00000372755 N4BP2L1Q5TBK1 243 aaPredicted RBP11.8□□□□□ -0.52
VCL-202ENST00000372755 TMEM132CQ8N3T6 1108 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 ENGASEQ8NFI3 743 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 FHDC1Q9C0D6 1143 aaPredicted RBP11.8□□□□□ -0.52
VCL-202ENST00000372755 BARX2Q9UMQ3 279 aaPredicted RBP11.8□□□□□ -0.52
VCL-202ENST00000372755 POLR1DQ9Y2S0 133 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 TPRKBQ9Y3C4 175 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 CCDC154A6NI56 674 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 TEX28O15482 410 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 MED26O95402 600 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 FGFR1P11362 822 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 FGFR2P21802 821 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 C2CD6Q53TS8 623 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 WASHC2DQ5SRD0 308 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 TLK2Q86UE8 772 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 KCNMB4Q86W47 210 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 GMCL1Q96IK5 515 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 AGO4Q9HCK5 861 aaKnown RBP11.8□□□□□ -0.52
VCL-202ENST00000372755 TAS2R13Q9NYV9 303 aa11.8□□□□□ -0.52
VCL-202ENST00000372755 SMIM22K7EJ46 135 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 HPCAL1P37235 193 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 NR2C2P49116 596 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 BMPR2Q13873 1038 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 PCDHA3Q9Y5H8 950 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 A0A088AWK7 358 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 IGSF6O95976 241 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 CYP1A1P04798 512 aaPredicted RBP11.79□□□□□ -0.52
VCL-202ENST00000372755 ABCB1P08183 1280 aaPredicted RBP11.79□□□□□ -0.52
VCL-202ENST00000372755 MYL12AP19105 171 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 ZNF10P21506 573 aaPredicted RBP11.79□□□□□ -0.52
VCL-202ENST00000372755 TROAPQ12815 778 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 ZNF268Q14587 947 aaPredicted RBP11.79□□□□□ -0.52
VCL-202ENST00000372755 DSG4Q86SJ6 1040 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 SLC47A2Q86VL8 602 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 COMMD2Q86X83 199 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 TMPRSS6Q8IU80 811 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 RTL3Q8N8U3 475 aaKnown RBP11.79□□□□□ -0.52
VCL-202ENST00000372755 TAS1R2Q8TE23 839 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 SKA1Q96BD8 255 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 LRRC39Q96DD0 335 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 SERPINB11Q96P15 392 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 PANX3Q96QZ0 392 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 STARD7Q9NQZ5 370 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 CROCC2H7BZ55 1655 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 BCL10O95999 233 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 HOXB8P17481 243 aaPredicted RBP11.79□□□□□ -0.52
VCL-202ENST00000372755 LAMTOR4Q0VGL1 99 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 FNDC5Q8NAU1 212 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 DNERQ8NFT8 737 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 CAVIN3Q969G5 261 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 CEP44Q9C0F1 390 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 MRPL39Q9NYK5 338 aaKnown RBP11.79□□□□□ -0.52
VCL-202ENST00000372755 SPATA31A6Q5VVP1 1343 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 HACD1B0YJ81 288 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 SEC22BO75396 215 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 LDLRP01130 860 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 OVOS1Q6IE37 1185 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 METTL7BQ6UX53 244 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 CLYBLQ8N0X4 340 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 CAMKK1Q8N5S9 505 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 NACC2Q96BF6 587 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 BBS4Q96RK4 519 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 ATP13A1Q9HD20 1204 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 ATP6V1HQ9UI12 483 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 SPATA2Q9UM82 520 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 PPP2R3BQ9Y5P8 575 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 GLI2P10070 1586 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 PREX2Q70Z35 1606 aa11.79□□□□□ -0.52
VCL-202ENST00000372755 CD3EAPO15446 510 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms