RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 GPSM3Q9Y4H4 160 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 DUSP10Q9Y6W6 482 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 DAB1O75553 588 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 PTAR1Q7Z6K3 402 aaPredicted RBP10.04□□□□□ -0.8
COL4A6-202ENST00000372216 PRUNE1Q86TP1 453 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 VSIG10LQ86VR7 867 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 ZNF606Q8WXB4 792 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 SENP8Q96LD8 212 aa10.04□□□□□ -0.8
COL4A6-202ENST00000372216 RBM22Q9NW64 420 aaKnown RBP eCLIP10.04□□□□□ -0.8
COL4A6-202ENST00000372216 IFRD1O00458 451 aaPredicted RBP10.03□□□□□ -0.8
COL4A6-202ENST00000372216 MAPK7Q13164 816 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 FBXL16Q8N461 479 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 LPPQ93052 612 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 CNBD2Q96M20 576 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 AGXT2Q9BYV1 514 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 EIF3LQ9Y262 564 aaKnown RBP10.03□□□□□ -0.8
COL4A6-202ENST00000372216 NCKAP1Q9Y2A7 1128 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 SERPINB5P36952 375 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 SLC29A2Q14542 456 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 RARS2Q5T160 578 aaKnown RBP10.03□□□□□ -0.8
COL4A6-202ENST00000372216 MARC1Q5VT66 337 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 PCYOX1LQ8NBM8 494 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 SEMA4DQ92854 862 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 OMDQ99983 421 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 OSBPL6Q9BZF3 934 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 ZDHHC6Q9H6R6 413 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 CDY1Q9Y6F8 540 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 PLA2G6O60733 806 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 SLURP2P0DP57 97 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 GLRA2P23416 452 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 SERPINB3P29508 390 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 PCYT1AP49585 367 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 AKIRIN2Q53H80 203 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 ANO5Q75V66 913 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 R3HCC1LQ7Z5L2 792 aaKnown RBP10.03□□□□□ -0.8
COL4A6-202ENST00000372216 CCNJLQ8IV13 435 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 DEFB106AQ8N104 65 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 VPS37AQ8NEZ2 397 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 GRIN3AQ8TCU5 1115 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 TSC22D3Q99576 134 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 ECSITQ9BQ95 431 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 EPN3Q9H201 632 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 ZCCHC17Q9NP64 241 aaKnown RBP10.03□□□□□ -0.8
COL4A6-202ENST00000372216 STOML1Q9UBI4 398 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 DCDC2Q9UHG0 476 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 A0A0A6YYK5 440 aaPredicted RBP10.03□□□□□ -0.8
COL4A6-202ENST00000372216 TRPC5OSA6NMA1 111 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 TISP43B9A030 160 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 ZNF682O95780 498 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 LTFP02788 710 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 PAEPP09466 180 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 ZNF268Q14587 947 aaPredicted RBP10.03□□□□□ -0.8
COL4A6-202ENST00000372216 CNGA3Q16281 694 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 BBS7Q8IWZ6 715 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 ZSCAN18Q8TBC5 510 aaPredicted RBP10.03□□□□□ -0.8
COL4A6-202ENST00000372216 NMRK1Q9NWW6 199 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 UBIAD1Q9Y5Z9 338 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 PHF20L1A8MW92 1017 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 CCNT2O60583 730 aaKnown RBP10.03□□□□□ -0.8
COL4A6-202ENST00000372216 SPATA31D3P0C874 917 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 EIF2B5Q13144 721 aaKnown RBP10.03□□□□□ -0.8
COL4A6-202ENST00000372216 BOP1Q14137 746 aaKnown RBP10.03□□□□□ -0.8
COL4A6-202ENST00000372216 RETSATQ6NUM9 610 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 SPATA31D4Q6ZUB0 917 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 STRA8Q7Z7C7 330 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 LONP2Q86WA8 852 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 PMM1Q92871 262 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 ZIM3Q96PE6 472 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 KRCC1Q9NPI7 259 aaPredicted RBP10.03□□□□□ -0.8
COL4A6-202ENST00000372216 SPATS2LQ9NUQ6 558 aaKnown RBP10.03□□□□□ -0.8
COL4A6-202ENST00000372216 GID8Q9NWU2 228 aa10.03□□□□□ -0.8
COL4A6-202ENST00000372216 TRDMT1O14717 391 aaKnown RBP10.02□□□□□ -0.8
COL4A6-202ENST00000372216 NCAM2O15394 837 aa10.02□□□□□ -0.8
COL4A6-202ENST00000372216 PSMD10O75832 226 aa10.02□□□□□ -0.8
COL4A6-202ENST00000372216 SUPT7LO94864 414 aa10.02□□□□□ -0.8
COL4A6-202ENST00000372216 KLHL2O95198 593 aa10.02□□□□□ -0.8
COL4A6-202ENST00000372216 IGSF6O95976 241 aa10.02□□□□□ -0.8
COL4A6-202ENST00000372216 FAM107AO95990 144 aa10.02□□□□□ -0.8
COL4A6-202ENST00000372216 POLR2EP19388 210 aaKnown RBP10.02□□□□□ -0.8
COL4A6-202ENST00000372216 SLC6A3Q01959 620 aa10.02□□□□□ -0.8
COL4A6-202ENST00000372216 CREMQ03060 361 aa10.02□□□□□ -0.8
COL4A6-202ENST00000372216 NOMO2Q5JPE7 1267 aa10.02□□□□□ -0.8
COL4A6-202ENST00000372216 CACHD1Q5VU97 1274 aa10.02□□□□□ -0.8
COL4A6-202ENST00000372216 WSCD1Q658N2 575 aa10.02□□□□□ -0.8
COL4A6-202ENST00000372216 KIAA0319LQ8IZA0 1049 aa10.02□□□□□ -0.8
COL4A6-202ENST00000372216 CENPLQ8N0S6 344 aaPredicted RBP10.02□□□□□ -0.8
COL4A6-202ENST00000372216 FIBCD1Q8N539 461 aa10.02□□□□□ -0.8
COL4A6-202ENST00000372216 ZSWIM2Q8NEG5 633 aa10.02□□□□□ -0.8
COL4A6-202ENST00000372216 MTERF3Q96E29 417 aa10.02□□□□□ -0.8
COL4A6-202ENST00000372216 MTMR9Q96QG7 549 aa10.02□□□□□ -0.8
COL4A6-202ENST00000372216 AKAP7Q9P0M2 348 aaPredicted RBP10.02□□□□□ -0.8
COL4A6-202ENST00000372216 LNPEPQ9UIQ6 1025 aa10.02□□□□□ -0.8
COL4A6-202ENST00000372216 VANGL2Q9ULK5 521 aa10.02□□□□□ -0.8
COL4A6-202ENST00000372216 GLRA3O75311 464 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 NOS3P29474 1203 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 MCL1Q07820 350 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 C11orf63Q6NUN7 778 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 CCDC149Q6ZUS6 474 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 PRPF39Q86UA1 669 aaKnown RBP10.02□□□□□ -0.81
COL4A6-202ENST00000372216 ACOX2Q99424 681 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms