RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 SUPT3HB4E1H0 165 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 TRIM49D1C9J1S8 452 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 CHRM3P20309 590 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 CCL23P55773 120 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 PREPLQ4J6C6 727 aaPredicted RBP13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 EFL1Q7Z2Z2 1120 aaKnown RBP13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 SRPK1Q96SB4 655 aaKnown RBP13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 ELOVL4Q9GZR5 314 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 STN1Q9H668 368 aaKnown RBP13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 RXFP1Q9HBX9 757 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 MRPL39Q9NYK5 338 aaKnown RBP13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 AP4E1Q9UPM8 1137 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 CAPN6Q9Y6Q1 641 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 ALBP02768 609 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 NUDT2P50583 147 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 KCNK10P57789 538 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 RHOAP61586 193 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 KCNMA1Q12791 1236 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 OVGP1Q12889 678 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 FAM110CQ1W6H9 321 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 DEPDC1Q5TB30 811 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 OOSP2Q86WS3 158 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 LSM14AQ8ND56 463 aaKnown RBP13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 FAM111AQ96PZ2 611 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 DMAP1Q9NPF5 467 aaPredicted RBP13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 TSPAN16Q9UKR8 245 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 YDJCA8MPS7 323 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 F8VZ95 297 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 PLA2G6O60733 806 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 CAPN15O75808 1086 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 CLK1P49759 484 aaKnown RBP13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 STX5Q13190 355 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 C2CD6Q53TS8 623 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 IFNEQ86WN2 208 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 MAP4K3Q8IVH8 894 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 BLOC1S5Q8TDH9 187 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 DEFB118Q96PH6 123 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 MYO1GB0I1T2 1018 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 BTBD19C9JJ37 291 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 ADCY6O43306 1168 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 USP2O75604 605 aaPredicted RBP13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 RECQL4O94761 1208 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 STIP1P31948 543 aaKnown RBP13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 CLEC16AQ2KHT3 1053 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 TMEM86AQ8N2M4 240 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 TATDN2Q93075 761 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 GAD1Q99259 594 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 PSMD10O75832 226 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 CCR1P32246 355 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 VCPP55072 806 aaKnown RBP13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 CREMQ03060 361 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 PCBP1Q15365 356 aaKnown RBP eCLIP13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 DENND5BQ6ZUT9 1274 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 MMADHCQ9H3L0 296 aaPredicted RBP13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 ATAD3AQ9NVI7 634 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 FAM32AQ9Y421 112 aaKnown RBP13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 A0A1W2PRG6 482 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 SPATA31C2B4DYI2 1134 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 MEIS2O14770 477 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 ZNF806P0C7X5 589 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 THRAP10827 490 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 GZMAP12544 262 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 TBX4P57082 545 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 NUP107P57740 925 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 MROH9Q5TGP6 573 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 UGT3A1Q6NUS8 523 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 C12orf50Q8NA57 414 aaPredicted RBP13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 CAPNS2Q96L46 248 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 GPATCH2LQ9NWQ4 482 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 RAB21Q9UL25 225 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 USP18Q9UMW8 372 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 HEATR9A2RTY3 570 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 GLRA3O75311 464 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 KLHL18O94889 574 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 PPP3CCP48454 512 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 TRIM25Q14258 630 aaKnown RBP13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 SPDYAQ5MJ70 313 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 TRIM74Q86UV6 250 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 TRIM73Q86UV7 250 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 FAM131BQ86XD5 332 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 CSGALNACT1Q8TDX6 532 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 RRN3Q9NYV6 651 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 ADGRA3Q8IWK6 1321 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 A0A087X0T9 212 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 A0A0A6YYK5 440 aaPredicted RBP13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 USP1O94782 785 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 FAM228BP0C875 321 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 PTPN4P29074 926 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 ZDHHC17Q8IUH5 632 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 MTMR9Q96QG7 549 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 C17orf80Q9BSJ5 609 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 KLHL4Q9C0H6 718 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 DDX20Q9UHI6 824 aaKnown RBP13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 USP20Q9Y2K6 914 aa13.64□□□□□ -0.23
RAPGEF1-201ENST00000372189 PARP4Q9UKK3 1724 aaKnown RBP13.63□□□□□ -0.23
RAPGEF1-201ENST00000372189 SNPHO15079 494 aa13.63□□□□□ -0.23
RAPGEF1-201ENST00000372189 KCNT1Q5JUK3 1230 aa13.63□□□□□ -0.23
RAPGEF1-201ENST00000372189 EGFL6Q8IUX8 553 aa13.63□□□□□ -0.23
RAPGEF1-201ENST00000372189 KIAA0895Q8NCT3 520 aa13.63□□□□□ -0.23
RAPGEF1-201ENST00000372189 RXFP2Q8WXD0 754 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms