RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 KPNA1P52294 538 aaPredicted RBP27.17■■□□□ 1.94
ATPAF1-202ENST00000371937 GDF10P55107 478 aa27.17■■□□□ 1.94
ATPAF1-202ENST00000371937 SLC10A2Q12908 348 aaPredicted RBP27.17■■□□□ 1.94
ATPAF1-202ENST00000371937 TRIP4Q15650 581 aaPredicted RBP27.17■■□□□ 1.94
ATPAF1-202ENST00000371937 TSPYL1Q9H0U9 437 aa27.17■■□□□ 1.94
ATPAF1-202ENST00000371937 SLC12A6Q9UHW9 1150 aa27.17■■□□□ 1.94
ATPAF1-202ENST00000371937 HPCAL4Q9UM19 191 aa27.17■■□□□ 1.94
ATPAF1-202ENST00000371937 RAD54BQ9Y620 910 aa27.17■■□□□ 1.94
ATPAF1-202ENST00000371937 LRIG2O94898 1065 aa27.16■■□□□ 1.94
ATPAF1-202ENST00000371937 ZSCAN5DPP0CG00 497 aa27.16■■□□□ 1.94
ATPAF1-202ENST00000371937 ETS1P14921 441 aa27.16■■□□□ 1.94
ATPAF1-202ENST00000371937 ERCC2P18074 760 aa27.16■■□□□ 1.94
ATPAF1-202ENST00000371937 ITGA8P53708 1063 aa27.16■■□□□ 1.94
ATPAF1-202ENST00000371937 EPHB3P54753 998 aa27.16■■□□□ 1.94
ATPAF1-202ENST00000371937 PLD1Q13393 1074 aa27.16■■□□□ 1.94
ATPAF1-202ENST00000371937 PRUNE1Q86TP1 453 aa27.16■■□□□ 1.94
ATPAF1-202ENST00000371937 SIK2Q9H0K1 926 aa27.16■■□□□ 1.94
ATPAF1-202ENST00000371937 INSL5Q9Y5Q6 135 aa27.16■■□□□ 1.94
ATPAF1-202ENST00000371937 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.16■■□□□ 1.94
ATPAF1-202ENST00000371937 HACD1B0YJ81 288 aa27.16■■□□□ 1.94
ATPAF1-202ENST00000371937 TBX18O95935 607 aa27.16■■□□□ 1.94
ATPAF1-202ENST00000371937 APOEP02649 317 aa27.16■■□□□ 1.94
ATPAF1-202ENST00000371937 ADH1AP07327 375 aa27.16■■□□□ 1.94
ATPAF1-202ENST00000371937 EPHB2P29323 1055 aa27.16■■□□□ 1.94
ATPAF1-202ENST00000371937 ACTN2P35609 894 aa27.16■■□□□ 1.94
ATPAF1-202ENST00000371937 PPP3CCP48454 512 aa27.16■■□□□ 1.94
ATPAF1-202ENST00000371937 TWF1Q12792 350 aa27.16■■□□□ 1.94
ATPAF1-202ENST00000371937 SLC45A4Q5BKX6 768 aa27.16■■□□□ 1.94
ATPAF1-202ENST00000371937 IZUMO3Q5VZ72 239 aa27.16■■□□□ 1.94
ATPAF1-202ENST00000371937 TMC3Q7Z5M5 1100 aa27.16■■□□□ 1.94
ATPAF1-202ENST00000371937 FCRL2Q96LA5 508 aaPredicted RBP27.16■■□□□ 1.94
ATPAF1-202ENST00000371937 C1orf74Q96LT6 269 aa27.16■■□□□ 1.94
ATPAF1-202ENST00000371937 OLFM3Q96PB7 478 aa27.16■■□□□ 1.94
ATPAF1-202ENST00000371937 USP29Q9HBJ7 922 aa27.16■■□□□ 1.94
ATPAF1-202ENST00000371937 TRPM5Q9NZQ8 1165 aa27.16■■□□□ 1.94
ATPAF1-202ENST00000371937 IRAK3Q9Y616 596 aa27.16■■□□□ 1.94
ATPAF1-202ENST00000371937 DNALI1O14645 258 aaPredicted RBP27.15■■□□□ 1.94
ATPAF1-202ENST00000371937 TP73O15350 636 aa27.15■■□□□ 1.94
ATPAF1-202ENST00000371937 DHX9Q08211 1270 aaKnown RBP27.15■■□□□ 1.94
ATPAF1-202ENST00000371937 MTA1Q13330 715 aa27.15■■□□□ 1.94
ATPAF1-202ENST00000371937 PCGF5Q86SE9 256 aa27.15■■□□□ 1.94
ATPAF1-202ENST00000371937 MIB1Q86YT6 1006 aa27.15■■□□□ 1.94
ATPAF1-202ENST00000371937 RTP4Q96DX8 246 aa27.15■■□□□ 1.94
ATPAF1-202ENST00000371937 EMILIN2Q9BXX0 1053 aa27.15■■□□□ 1.94
ATPAF1-202ENST00000371937 CCSER2Q9H7U1 834 aa27.15■■□□□ 1.94
ATPAF1-202ENST00000371937 UXTQ9UBK9 157 aaPredicted RBP27.15■■□□□ 1.94
ATPAF1-202ENST00000371937 TPX2Q9ULW0 747 aaKnown RBP27.15■■□□□ 1.94
ATPAF1-202ENST00000371937 ZNF840PA6NDX5 716 aa27.14■■□□□ 1.94
ATPAF1-202ENST00000371937 KCNN4O15554 427 aa27.14■■□□□ 1.94
ATPAF1-202ENST00000371937 MAP3K6O95382 1288 aa27.14■■□□□ 1.94
ATPAF1-202ENST00000371937 NRG1Q02297 640 aaPredicted RBP27.14■■□□□ 1.94
ATPAF1-202ENST00000371937 RING1Q06587 406 aa27.14■■□□□ 1.94
ATPAF1-202ENST00000371937 GPS2Q13227 327 aa27.14■■□□□ 1.94
ATPAF1-202ENST00000371937 PDK1Q15118 436 aa27.14■■□□□ 1.94
ATPAF1-202ENST00000371937 ACBD5Q5T8D3 534 aaPredicted RBP27.14■■□□□ 1.94
ATPAF1-202ENST00000371937 RHBDF2Q6PJF5 856 aa27.14■■□□□ 1.94
ATPAF1-202ENST00000371937 ITIH5Q86UX2 942 aa27.14■■□□□ 1.94
ATPAF1-202ENST00000371937 ATP6V0D2Q8N8Y2 350 aa27.14■■□□□ 1.94
ATPAF1-202ENST00000371937 QKIQ96PU8 341 aaKnown RBP eCLIP27.14■■□□□ 1.94
ATPAF1-202ENST00000371937 TCF25Q9BQ70 676 aa27.14■■□□□ 1.94
ATPAF1-202ENST00000371937 MFHAS1Q9Y4C4 1052 aa27.14■■□□□ 1.94
ATPAF1-202ENST00000371937 SNX10Q9Y5X0 201 aa27.14■■□□□ 1.94
ATPAF1-202ENST00000371937 TGM5O43548 720 aa27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 MFSD11O43934 449 aa27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 PPFIA2O75334 1257 aa27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 ZNF189O75820 626 aaPredicted RBP27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 MOCS2O96007 188 aaPredicted RBP27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 RBL1P28749 1068 aa27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 SERPINB6P35237 376 aa27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 ATP5C1P36542 298 aaKnown RBP27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 SLMAPQ14BN4 828 aa27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 HECTD3Q5T447 861 aa27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 ALS2CLQ60I27 953 aa27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 KLHDC10Q6PID8 442 aa27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 TSEN2Q8NCE0 465 aaKnown RBP27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 TFB1MQ8WVM0 346 aaKnown RBP27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 FERMT1Q9BQL6 677 aa27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 ALG13Q9NP73 1137 aaKnown RBP27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 ENTPD7Q9NQZ7 604 aa27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 DNMT3LQ9UJW3 386 aa27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 SLC12A8A0AV02 714 aa27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 LINC01553A4QN01 128 aa27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 NCAM2O15394 837 aa27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 SRGAP2BP0DMP2 458 aa27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 RPL22P35268 128 aaKnown RBP27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 MLLT6P55198 1093 aaPredicted RBP27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 UBE3AQ05086 875 aa27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 HIBCHQ6NVY1 386 aaPredicted RBP27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 DNAJB7Q7Z6W7 309 aaPredicted RBP27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 PSMG2Q969U7 264 aa27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 BTN2A3PQ96KV6 586 aa27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 FOXP3Q9BZS1 431 aa27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 ADAM7Q9H2U9 754 aa27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 HBS1LQ9Y450 684 aaKnown RBP27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 ASB3Q9Y575 518 aa27.13■■□□□ 1.93
ATPAF1-202ENST00000371937 PLXNA4Q9HCM2 1894 aa27.12■■□□□ 1.93
ATPAF1-202ENST00000371937 PPP1R12AO14974 1030 aaPredicted RBP27.12■■□□□ 1.93
ATPAF1-202ENST00000371937 FGF10O15520 208 aaPredicted RBP27.12■■□□□ 1.93
ATPAF1-202ENST00000371937 MORF4L2Q15014 288 aa27.12■■□□□ 1.93
ATPAF1-202ENST00000371937 SPDYCQ5MJ68 293 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms