RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 ZC3H12CQ9C0D7 883 aaKnown RBP12.07□□□□□ -0.48
PTPN1-201ENST00000371621 PCDHAC1Q9H158 963 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 VPS45Q9NRW7 570 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 SLC8A2Q9UPR5 921 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 STXBP5LQ9Y2K9 1186 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 PCDHB2Q9Y5E7 798 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 FRMPD4Q14CM0 1322 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 F8VP50 259 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 TBX1O43435 398 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 DBTP11182 482 aaKnown RBP12.07□□□□□ -0.48
PTPN1-201ENST00000371621 XRCC1P18887 633 aaPredicted RBP12.07□□□□□ -0.48
PTPN1-201ENST00000371621 CDK9P50750 372 aaKnown RBP12.07□□□□□ -0.48
PTPN1-201ENST00000371621 ZNF846Q147U1 533 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 ZFP69Q49AA0 526 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 UBE2UQ5VVX9 321 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 KCTD8Q6ZWB6 473 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 CAMK1DQ8IU85 385 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 ELMOD2Q8IZ81 293 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 CBR4Q8N4T8 237 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 SERAC1Q96JX3 654 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 ADPGKQ9BRR6 497 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 ACSS3Q9H6R3 686 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 MID2Q9UJV3 735 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 A0A0B4J269 797 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 E7ENX8 843 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 VWA5AO00534 786 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 ZBTB5O15062 677 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 SLC4A1P02730 911 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 PCNAP12004 261 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 PRKACBP22694 351 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 TTKP33981 857 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 NR4A2P43354 598 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 CD151P48509 253 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 CASP7P55210 303 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 USP10Q14694 798 aaKnown RBP12.07□□□□□ -0.48
PTPN1-201ENST00000371621 QRICH1Q2TAL8 776 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 SULT1C3Q6IMI6 304 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 SPOCD1Q6ZMY3 1216 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 C11orf74Q86VG3 221 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 HERC6Q8IVU3 1022 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 GLIS1Q8NBF1 620 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 STARD8Q92502 1023 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 CEP170P1Q96L14 293 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 RNF145Q96MT1 663 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 MBOAT7Q96N66 472 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 PKP2Q99959 881 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 BTBD3Q9Y2F9 522 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 GIT1Q9Y2X7 761 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 CNTNAP2Q9UHC6 1331 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 POLRMTO00411 1230 aaKnown RBP12.06□□□□□ -0.48
PTPN1-201ENST00000371621 ALOX15BO15296 676 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 DNAJA2O60884 412 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 CLK3P49761 638 aaKnown RBP12.06□□□□□ -0.48
PTPN1-201ENST00000371621 IL5RAQ01344 420 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 VAC14Q08AM6 782 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 FUT2Q10981 343 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 FAM102AQ5T9C2 384 aaPredicted RBP12.06□□□□□ -0.48
PTPN1-201ENST00000371621 C12orf60Q5U649 245 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 UGT2A3Q6UWM9 527 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 DSELQ8IZU8 1212 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 MTERF3Q96E29 417 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 SNX27Q96L92 541 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 PCDHB18PQ96TA0 734 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 LXNQ9BS40 222 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 TPK1Q9H3S4 243 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 FANCEQ9HB96 536 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 PCDH9Q9HC56 1237 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 IARS2Q9NSE4 1012 aaKnown RBP12.06□□□□□ -0.48
PTPN1-201ENST00000371621 KLHL8Q9P2G9 620 aaPredicted RBP12.06□□□□□ -0.48
PTPN1-201ENST00000371621 TMEM98Q9Y2Y6 226 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 UNCXA6NJT0 531 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 MYO1GB0I1T2 1018 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 GLRA3O75311 464 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 AMHP03971 560 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 MZF1P28698 734 aaPredicted RBP12.06□□□□□ -0.48
PTPN1-201ENST00000371621 IL12AP29459 219 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 TAS2R40P59535 323 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 SULT2A1Q06520 285 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 DMC1Q14565 340 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 DGUOKQ16854 277 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 FGD3Q5JSP0 725 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 FRMD7Q6ZUT3 714 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 BBS5Q8N3I7 341 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 PCYOX1LQ8NBM8 494 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 EXD1Q8NHP7 514 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 NEDD1Q8NHV4 660 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 RORBQ92753 470 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 CLIP3Q96DZ5 547 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 CRAMP1Q96RY5 1269 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 C17orf75Q9HAS0 396 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 CYP26B1Q9NR63 512 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 DNAJC28Q9NX36 388 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 SNX8Q9Y5X2 465 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 H3BNX3 289 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 CCND2P30279 289 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 SERPINB9P50453 376 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 TUBA1BP68363 451 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 KLF10Q13118 480 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 MAPRE2Q15555 327 aa12.06□□□□□ -0.48
PTPN1-201ENST00000371621 NIPAL1Q6NVV3 410 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms