RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 PECAM1P16284 738 aaPredicted RBP17.93■□□□□ 0.46
UBE3D-203ENST00000369747 ELF1P32519 619 aa17.93■□□□□ 0.46
UBE3D-203ENST00000369747 PGFP49763 221 aa17.93■□□□□ 0.46
UBE3D-203ENST00000369747 CDH6P55285 790 aa17.93■□□□□ 0.46
UBE3D-203ENST00000369747 DAOAP59103 153 aa17.93■□□□□ 0.46
UBE3D-203ENST00000369747 RPL10AP62906 217 aaKnown RBP17.93■□□□□ 0.46
UBE3D-203ENST00000369747 AUHQ13825 339 aaKnown RBP17.93■□□□□ 0.46
UBE3D-203ENST00000369747 HFE2Q6ZVN8 426 aa17.93■□□□□ 0.46
UBE3D-203ENST00000369747 BCAS4Q8TDM0 211 aa17.93■□□□□ 0.46
UBE3D-203ENST00000369747 FOXP3Q9BZS1 431 aa17.93■□□□□ 0.46
UBE3D-203ENST00000369747 ROPN1BQ9BZX4 212 aaPredicted RBP17.93■□□□□ 0.46
UBE3D-203ENST00000369747 RABEP2Q9H5N1 569 aa17.93■□□□□ 0.46
UBE3D-203ENST00000369747 C10orf88Q9H8K7 445 aa17.93■□□□□ 0.46
UBE3D-203ENST00000369747 ROPN1Q9HAT0 212 aaPredicted RBP17.93■□□□□ 0.46
UBE3D-203ENST00000369747 TPX2Q9ULW0 747 aaKnown RBP17.93■□□□□ 0.46
UBE3D-203ENST00000369747 GREB1Q4ZG55 1949 aa17.93■□□□□ 0.46
UBE3D-203ENST00000369747 ZNF638Q14966 1978 aaKnown RBP17.92■□□□□ 0.46
UBE3D-203ENST00000369747 GLUD1P00367 558 aa17.92■□□□□ 0.46
UBE3D-203ENST00000369747 SDC4P31431 198 aa17.92■□□□□ 0.46
UBE3D-203ENST00000369747 SLCO1A2P46721 670 aa17.92■□□□□ 0.46
UBE3D-203ENST00000369747 GDF10P55107 478 aa17.92■□□□□ 0.46
UBE3D-203ENST00000369747 IFI35P80217 286 aaPredicted RBP17.92■□□□□ 0.46
UBE3D-203ENST00000369747 DPYSL3Q14195 570 aa17.92■□□□□ 0.46
UBE3D-203ENST00000369747 PM20D1Q6GTS8 502 aa17.92■□□□□ 0.46
UBE3D-203ENST00000369747 SLC26A9Q7LBE3 791 aa17.92■□□□□ 0.46
UBE3D-203ENST00000369747 SLC7A14Q8TBB6 771 aa17.92■□□□□ 0.46
UBE3D-203ENST00000369747 FAM172AQ8WUF8 416 aa17.92■□□□□ 0.46
UBE3D-203ENST00000369747 FAM149B1Q96BN6 582 aa17.92■□□□□ 0.46
UBE3D-203ENST00000369747 SPATA17Q96L03 361 aa17.92■□□□□ 0.46
UBE3D-203ENST00000369747 FBXW11Q9UKB1 542 aa17.92■□□□□ 0.46
UBE3D-203ENST00000369747 INSL5Q9Y5Q6 135 aa17.92■□□□□ 0.46
UBE3D-203ENST00000369747 COL4A4P53420 1690 aaPredicted RBP17.92■□□□□ 0.46
UBE3D-203ENST00000369747 AGTP01019 485 aa17.92■□□□□ 0.46
UBE3D-203ENST00000369747 IFNB1P01574 187 aa17.92■□□□□ 0.46
UBE3D-203ENST00000369747 PPARDQ03181 441 aa17.92■□□□□ 0.46
UBE3D-203ENST00000369747 TWF1Q12792 350 aa17.92■□□□□ 0.46
UBE3D-203ENST00000369747 LONRF1Q17RB8 773 aa17.92■□□□□ 0.46
UBE3D-203ENST00000369747 LRIT3Q3SXY7 679 aa17.92■□□□□ 0.46
UBE3D-203ENST00000369747 RNASEH2BQ5TBB1 312 aaKnown RBP17.92■□□□□ 0.46
UBE3D-203ENST00000369747 KREMEN2Q8NCW0 462 aa17.92■□□□□ 0.46
UBE3D-203ENST00000369747 RBM15Q96T37 977 aaKnown RBP eCLIP17.92■□□□□ 0.46
UBE3D-203ENST00000369747 ZNF576Q9H609 170 aa17.92■□□□□ 0.46
UBE3D-203ENST00000369747 CWC15Q9P013 229 aaKnown RBP17.92■□□□□ 0.46
UBE3D-203ENST00000369747 UNC80Q8N2C7 3258 aa17.91■□□□□ 0.46
UBE3D-203ENST00000369747 CLASP2O75122 1294 aaKnown RBP17.91■□□□□ 0.46
UBE3D-203ENST00000369747 FBXO21O94952 628 aa17.91■□□□□ 0.46
UBE3D-203ENST00000369747 ALDH1A3P47895 512 aa17.91■□□□□ 0.46
UBE3D-203ENST00000369747 MORF4L2Q15014 288 aa17.91■□□□□ 0.46
UBE3D-203ENST00000369747 PDE12Q6L8Q7 609 aaKnown RBP17.91■□□□□ 0.46
UBE3D-203ENST00000369747 EPN3Q9H201 632 aa17.91■□□□□ 0.46
UBE3D-203ENST00000369747 MAGED2Q9UNF1 606 aaPredicted RBP17.91■□□□□ 0.46
UBE3D-203ENST00000369747 SLC38A8A6NNN8 435 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 FYNP06241 537 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 EPCAMP16422 314 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 TFE3P19532 575 aaPredicted RBP17.9■□□□□ 0.46
UBE3D-203ENST00000369747 SCNN1AP37088 669 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 MAGEA4P43358 317 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 HDAC4P56524 1084 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 YWHAZP63104 245 aaKnown RBP17.9■□□□□ 0.46
UBE3D-203ENST00000369747 BOLA3Q53S33 107 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 EFHC1Q5JVL4 640 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 SCYL2Q6P3W7 929 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 TEKT4Q8WW24 435 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 ADAM33Q9BZ11 813 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 GPATCH2LQ9NWQ4 482 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 IL37Q9NZH6 218 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 MAFFQ9ULX9 164 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 MYO16Q9Y6X6 1858 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 SRRM3A6NNA2 597 aaPredicted RBP17.9■□□□□ 0.46
UBE3D-203ENST00000369747 C8AP07357 584 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 IL4RP24394 825 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 PTPN9P43378 593 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 MMP13P45452 471 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 EIF3EP60228 445 aaKnown RBP17.9■□□□□ 0.46
UBE3D-203ENST00000369747 PDK2Q15119 407 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 ZC3H12AQ5D1E8 599 aaKnown RBP17.9■□□□□ 0.46
UBE3D-203ENST00000369747 NPNTQ6UXI9 565 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 CEP128Q6ZU80 1094 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 ARCQ7LC44 396 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 UNC45BQ8IWX7 931 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 PRCCQ92733 491 aaPredicted RBP17.9■□□□□ 0.46
UBE3D-203ENST00000369747 C9orf72Q96LT7 481 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 SERPINB12Q96P63 405 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 RNF157Q96PX1 679 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 TBCBQ99426 244 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 SNRNP25Q9BV90 132 aaKnown RBP17.9■□□□□ 0.46
UBE3D-203ENST00000369747 MAK16Q9BXY0 300 aaKnown RBP17.9■□□□□ 0.46
UBE3D-203ENST00000369747 LMAN2LQ9H0V9 348 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 FBXO44Q9H4M3 255 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 CNOT10Q9H9A5 744 aaKnown RBP17.9■□□□□ 0.46
UBE3D-203ENST00000369747 SHOC2Q9UQ13 582 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 FARP1Q9Y4F1 1045 aaPredicted RBP17.9■□□□□ 0.46
UBE3D-203ENST00000369747 HCFC2Q9Y5Z7 792 aa17.9■□□□□ 0.46
UBE3D-203ENST00000369747 MTCL1Q9Y4B5 1905 aaKnown RBP17.89■□□□□ 0.46
UBE3D-203ENST00000369747 A0A1W2PPC1 479 aa17.89■□□□□ 0.45
UBE3D-203ENST00000369747 FAM92AA1XBS5 289 aa17.89■□□□□ 0.45
UBE3D-203ENST00000369747 MCF2LO15068 1137 aa17.89■□□□□ 0.45
UBE3D-203ENST00000369747 TCEA3O75764 348 aa17.89■□□□□ 0.45
UBE3D-203ENST00000369747 HMGA1P17096 107 aaKnown RBP17.89■□□□□ 0.45
UBE3D-203ENST00000369747 YWHAQP27348 245 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms