RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 SLC12A8A0AV02 714 aa24.69■■□□□ 1.54
SNX3-203ENST00000368979 DCLK1O15075 740 aa24.69■■□□□ 1.54
SNX3-203ENST00000368979 DAPK3O43293 454 aa24.69■■□□□ 1.54
SNX3-203ENST00000368979 LRIG2O94898 1065 aa24.69■■□□□ 1.54
SNX3-203ENST00000368979 F11P03951 625 aa24.69■■□□□ 1.54
SNX3-203ENST00000368979 ATP5C1P36542 298 aaKnown RBP24.69■■□□□ 1.54
SNX3-203ENST00000368979 KPNA1P52294 538 aaPredicted RBP24.69■■□□□ 1.54
SNX3-203ENST00000368979 NRG1Q02297 640 aaPredicted RBP24.69■■□□□ 1.54
SNX3-203ENST00000368979 GPM6BQ13491 265 aa24.69■■□□□ 1.54
SNX3-203ENST00000368979 MANEALQ5VSG8 457 aa24.69■■□□□ 1.54
SNX3-203ENST00000368979 PDE12Q6L8Q7 609 aaKnown RBP24.69■■□□□ 1.54
SNX3-203ENST00000368979 DDX42Q86XP3 938 aaKnown RBP eCLIP24.69■■□□□ 1.54
SNX3-203ENST00000368979 DPH5Q9H2P9 285 aa24.69■■□□□ 1.54
SNX3-203ENST00000368979 FAM114A2Q9NRY5 505 aa24.69■■□□□ 1.54
SNX3-203ENST00000368979 XPO7Q9UIA9 1087 aaKnown RBP24.69■■□□□ 1.54
SNX3-203ENST00000368979 HBS1LQ9Y450 684 aaKnown RBP24.69■■□□□ 1.54
SNX3-203ENST00000368979 MFHAS1Q9Y4C4 1052 aa24.69■■□□□ 1.54
SNX3-203ENST00000368979 OBSL1O75147 1896 aa24.69■■□□□ 1.54
SNX3-203ENST00000368979 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.68■■□□□ 1.54
SNX3-203ENST00000368979 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.68■■□□□ 1.54
SNX3-203ENST00000368979 COCHO43405 550 aa24.68■■□□□ 1.54
SNX3-203ENST00000368979 OAS1P00973 400 aaKnown RBP24.68■■□□□ 1.54
SNX3-203ENST00000368979 APOEP02649 317 aa24.68■■□□□ 1.54
SNX3-203ENST00000368979 RBP3P10745 1247 aa24.68■■□□□ 1.54
SNX3-203ENST00000368979 ECHS1P30084 290 aa24.68■■□□□ 1.54
SNX3-203ENST00000368979 HTR7P34969 479 aa24.68■■□□□ 1.54
SNX3-203ENST00000368979 GGCXP38435 758 aa24.68■■□□□ 1.54
SNX3-203ENST00000368979 NR2C2P49116 596 aa24.68■■□□□ 1.54
SNX3-203ENST00000368979 GBE1Q04446 702 aa24.68■■□□□ 1.54
SNX3-203ENST00000368979 PAFAH1B3Q15102 231 aaKnown RBP24.68■■□□□ 1.54
SNX3-203ENST00000368979 ARTNQ5T4W7 220 aa24.68■■□□□ 1.54
SNX3-203ENST00000368979 RTL10Q7L3V2 364 aa24.68■■□□□ 1.54
SNX3-203ENST00000368979 IFT81Q8WYA0 676 aa24.68■■□□□ 1.54
SNX3-203ENST00000368979 TMEM121Q9BTD3 319 aa24.68■■□□□ 1.54
SNX3-203ENST00000368979 LRRC3Q9BY71 257 aa24.68■■□□□ 1.54
SNX3-203ENST00000368979 TRIM31Q9BZY9 425 aa24.68■■□□□ 1.54
SNX3-203ENST00000368979 HEY1Q9Y5J3 304 aa24.68■■□□□ 1.54
SNX3-203ENST00000368979 HS3ST4Q9Y661 456 aa24.68■■□□□ 1.54
SNX3-203ENST00000368979 MOCS2O96007 188 aaPredicted RBP24.67■■□□□ 1.54
SNX3-203ENST00000368979 ERCC2P18074 760 aa24.67■■□□□ 1.54
SNX3-203ENST00000368979 HOXC13P31276 330 aa24.67■■□□□ 1.54
SNX3-203ENST00000368979 SLC10A2Q12908 348 aaPredicted RBP24.67■■□□□ 1.54
SNX3-203ENST00000368979 MAP9Q49MG5 647 aa24.67■■□□□ 1.54
SNX3-203ENST00000368979 TMC8Q8IU68 726 aa24.67■■□□□ 1.54
SNX3-203ENST00000368979 AENQ8WTP8 325 aaKnown RBP24.67■■□□□ 1.54
SNX3-203ENST00000368979 C1orf74Q96LT6 269 aa24.67■■□□□ 1.54
SNX3-203ENST00000368979 SIK2Q9H0K1 926 aa24.67■■□□□ 1.54
SNX3-203ENST00000368979 DTLQ9NZJ0 730 aa24.67■■□□□ 1.54
SNX3-203ENST00000368979 MTCL1Q9Y4B5 1905 aaKnown RBP24.67■■□□□ 1.54
SNX3-203ENST00000368979 ANAPC1Q9H1A4 1944 aa24.66■■□□□ 1.54
SNX3-203ENST00000368979 MFSD11O43934 449 aa24.66■■□□□ 1.54
SNX3-203ENST00000368979 CLASP2O75122 1294 aaKnown RBP24.66■■□□□ 1.54
SNX3-203ENST00000368979 RPL21P46778 160 aaKnown RBP24.66■■□□□ 1.54
SNX3-203ENST00000368979 BEND6Q5SZJ8 279 aaPredicted RBP24.66■■□□□ 1.54
SNX3-203ENST00000368979 PIK3R6Q5UE93 754 aa24.66■■□□□ 1.54
SNX3-203ENST00000368979 GSTA5Q7RTV2 222 aa24.66■■□□□ 1.54
SNX3-203ENST00000368979 ATP6V0D2Q8N8Y2 350 aa24.66■■□□□ 1.54
SNX3-203ENST00000368979 BTN2A3PQ96KV6 586 aa24.66■■□□□ 1.54
SNX3-203ENST00000368979 OLFM3Q96PB7 478 aa24.66■■□□□ 1.54
SNX3-203ENST00000368979 NKX2-4Q9H2Z4 354 aa24.66■■□□□ 1.54
SNX3-203ENST00000368979 NFU1Q9UMS0 254 aa24.66■■□□□ 1.54
SNX3-203ENST00000368979 SNX24Q9Y343 169 aa24.66■■□□□ 1.54
SNX3-203ENST00000368979 KRT14P02533 472 aa24.66■■□□□ 1.54
SNX3-203ENST00000368979 MLLT6P55198 1093 aaPredicted RBP24.66■■□□□ 1.54
SNX3-203ENST00000368979 MTA1Q13330 715 aa24.66■■□□□ 1.54
SNX3-203ENST00000368979 XRCC4Q13426 336 aa24.66■■□□□ 1.54
SNX3-203ENST00000368979 RAB30Q15771 203 aa24.66■■□□□ 1.54
SNX3-203ENST00000368979 PABPC1LQ4VXU2 614 aaKnown RBP24.66■■□□□ 1.54
SNX3-203ENST00000368979 TMCO3Q6UWJ1 677 aa24.66■■□□□ 1.54
SNX3-203ENST00000368979 ZC3H18Q86VM9 953 aaKnown RBP24.66■■□□□ 1.54
SNX3-203ENST00000368979 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.66■■□□□ 1.54
SNX3-203ENST00000368979 C10orf88Q9H8K7 445 aa24.66■■□□□ 1.54
SNX3-203ENST00000368979 ARFGAP3Q9NP61 516 aa24.66■■□□□ 1.54
SNX3-203ENST00000368979 GRHL1Q9NZI5 618 aa24.66■■□□□ 1.54
SNX3-203ENST00000368979 SLC12A6Q9UHW9 1150 aa24.66■■□□□ 1.54
SNX3-203ENST00000368979 C2orf78A6NCI8 922 aa24.65■■□□□ 1.54
SNX3-203ENST00000368979 SGK1O00141 431 aa24.65■■□□□ 1.54
SNX3-203ENST00000368979 MAP3K6O95382 1288 aa24.65■■□□□ 1.54
SNX3-203ENST00000368979 HMBSP08397 361 aa24.65■■□□□ 1.54
SNX3-203ENST00000368979 IVDP26440 423 aa24.65■■□□□ 1.54
SNX3-203ENST00000368979 EPHB2P29323 1055 aa24.65■■□□□ 1.54
SNX3-203ENST00000368979 GDF10P55107 478 aa24.65■■□□□ 1.54
SNX3-203ENST00000368979 TRIP13Q15645 432 aaPredicted RBP24.65■■□□□ 1.54
SNX3-203ENST00000368979 MS4A13Q5J8X5 152 aa24.65■■□□□ 1.54
SNX3-203ENST00000368979 PPM1LQ5SGD2 360 aa24.65■■□□□ 1.54
SNX3-203ENST00000368979 NUGGCQ68CJ6 796 aa24.65■■□□□ 1.54
SNX3-203ENST00000368979 ELMOD1Q8N336 334 aa24.65■■□□□ 1.54
SNX3-203ENST00000368979 CCDC89Q8N998 374 aa24.65■■□□□ 1.54
SNX3-203ENST00000368979 GLIS1Q8NBF1 620 aa24.65■■□□□ 1.54
SNX3-203ENST00000368979 CCHCR1Q8TD31 782 aa24.65■■□□□ 1.54
SNX3-203ENST00000368979 SLC22A17Q8WUG5 538 aa24.65■■□□□ 1.54
SNX3-203ENST00000368979 NACA2Q9H009 215 aa24.65■■□□□ 1.54
SNX3-203ENST00000368979 NEUROG2Q9H2A3 272 aa24.65■■□□□ 1.54
SNX3-203ENST00000368979 MAN1C1Q9NR34 630 aa24.65■■□□□ 1.54
SNX3-203ENST00000368979 ASIC3Q9UHC3 531 aa24.65■■□□□ 1.54
SNX3-203ENST00000368979 ATG2AQ2TAZ0 1938 aa24.64■■□□□ 1.54
SNX3-203ENST00000368979 BCLAF3A2AJT9 711 aaKnown RBP24.64■■□□□ 1.53
SNX3-203ENST00000368979 H7C0C1 242 aa24.64■■□□□ 1.53
SNX3-203ENST00000368979 SEC31AO94979 1220 aaKnown RBP24.64■■□□□ 1.53
SNX3-203ENST00000368979 SLC34A2O95436 690 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms