RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 FAM200BP0CF97 657 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 H2AFXP16104 143 aaPredicted RBP9.15□□□□□ -0.94
SNX27-201ENST00000368838 DESP17661 470 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 CETN2P41208 172 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 SOX9P48436 509 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 DRG2P55039 364 aaKnown RBP9.15□□□□□ -0.94
SNX27-201ENST00000368838 ZNF252P-AS1Q0IIN9 211 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 DUSP4Q13115 394 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 MTAPQ13126 283 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 KLF1Q13351 362 aaPredicted RBP9.15□□□□□ -0.94
SNX27-201ENST00000368838 BRD3Q15059 726 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 LPAL2Q16609 132 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 HADHQ16836 314 aaKnown RBP9.15□□□□□ -0.94
SNX27-201ENST00000368838 DCAF12L1Q5VU92 463 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 OVOS1Q6IE37 1185 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 CCDC70Q6NSX1 233 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 ZC3H14Q6PJT7 736 aaKnown RBP9.15□□□□□ -0.94
SNX27-201ENST00000368838 BLOC1S3Q6QNY0 202 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 LYPD8Q6UX82 237 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 VITQ6UXI7 678 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 FAM35AQ86V20 835 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 PIGZQ86VD9 579 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 DNAAF5Q86Y56 855 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 ELMOD1Q8N336 334 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 SUMF1Q8NBK3 374 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 SHKBP1Q8TBC3 707 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 ZSCAN18Q8TBC5 510 aaPredicted RBP9.15□□□□□ -0.94
SNX27-201ENST00000368838 FAM174AQ8TBP5 190 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 SEC14L1Q92503 715 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 ELSPBP1Q96BH3 223 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 PCED1BQ96HM7 432 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 C8orf48Q96LL4 319 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 ASB16Q96NS5 453 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 TRMT61BQ9BVS5 477 aaKnown RBP9.15□□□□□ -0.94
SNX27-201ENST00000368838 B3GNT5Q9BYG0 378 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 FAM129AQ9BZQ8 928 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 ZCWPW1Q9H0M4 648 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 DPEP3Q9H4B8 488 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 LRRC19Q9H756 370 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 ZFP14Q9HCL3 533 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 ASAH2Q9NR71 780 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 GDE1Q9NZC3 331 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 AFF4Q9UHB7 1163 aaKnown RBP9.15□□□□□ -0.94
SNX27-201ENST00000368838 FEZ2Q9UHY8 353 aaPredicted RBP9.15□□□□□ -0.94
SNX27-201ENST00000368838 YIPF1Q9Y548 306 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 HHLA1C9JL84 531 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 ARHGAP33O14559 1287 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 MDM4O15151 490 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 ATP8B1O43520 1251 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 SRGAP2O75044 1071 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 LRCH4O75427 683 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 ZNF189O75820 626 aaPredicted RBP9.14□□□□□ -0.95
SNX27-201ENST00000368838 RNF8O76064 485 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 ZRANB2O95218 330 aaKnown RBP eCLIP9.14□□□□□ -0.95
SNX27-201ENST00000368838 CALCAP01258 141 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 PDGFRBP09619 1106 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 GPD1P21695 349 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 HOXC13P31276 330 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 MATKP42679 507 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 FNTAP49354 379 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 OGDHQ02218 1023 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 GPR17Q13304 367 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 FZD5Q13467 585 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 ERCC6LQ2NKX8 1250 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 SEL1L2Q5TEA6 688 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 TPGS2Q68CL5 300 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 CC2D1AQ6P1N0 951 aaPredicted RBP9.14□□□□□ -0.95
SNX27-201ENST00000368838 ZNF852Q6ZMS4 543 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 SLC13A5Q86YT5 568 aaPredicted RBP9.14□□□□□ -0.95
SNX27-201ENST00000368838 ATAD1Q8NBU5 361 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 ZMIZ2Q8NF64 920 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 UBA3Q8TBC4 463 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 KRT35Q92764 455 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 SMARCD2Q92925 531 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 ZFYVE19Q96K21 471 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 MCEEQ96PE7 176 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 SLC2A13Q96QE2 648 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 SYNCQ9H7C4 482 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 ZNF334Q9HCZ1 680 aaPredicted RBP9.14□□□□□ -0.95
SNX27-201ENST00000368838 DMAP1Q9NPF5 467 aaPredicted RBP9.14□□□□□ -0.95
SNX27-201ENST00000368838 RCOR3Q9P2K3 495 aaPredicted RBP9.14□□□□□ -0.95
SNX27-201ENST00000368838 NCDNQ9UBB6 729 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 PCYOX1Q9UHG3 505 aa9.14□□□□□ -0.95
SNX27-201ENST00000368838 GOLGA6L10A0A0M3HER8 536 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 MED19A0JLT2 244 aaPredicted RBP9.13□□□□□ -0.95
SNX27-201ENST00000368838 MYBPHLA2RUH7 354 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 SLC38A8A6NNN8 435 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 HEPACAM2A8MVW5 462 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 ZNF197O14709 1029 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 ZNF185O15231 689 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 CEP104O60308 925 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 DAB1O75553 588 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 PYGMP11217 842 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 CCDC130P13994 396 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 PSMC3P17980 439 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 CHRNA3P32297 505 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 GBP1P32455 592 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 NOS2P35228 1153 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 YWHAZP63104 245 aaKnown RBP9.13□□□□□ -0.95
SNX27-201ENST00000368838 SLC25A11Q02978 314 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms