RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 CRTAC1Q9NQ79 661 aa14.46□□□□□ -0.09
USF1-202ENST00000368020 RNF19AQ9NV58 838 aa14.46□□□□□ -0.09
USF1-202ENST00000368020 EEF2KO00418 725 aaKnown RBP14.46□□□□□ -0.1
USF1-202ENST00000368020 PQBP1O60828 265 aaKnown RBP14.46□□□□□ -0.1
USF1-202ENST00000368020 KRT38O76015 456 aa14.46□□□□□ -0.1
USF1-202ENST00000368020 PARNO95453 639 aaKnown RBP14.46□□□□□ -0.1
USF1-202ENST00000368020 APOEP02649 317 aa14.46□□□□□ -0.1
USF1-202ENST00000368020 AMPD1P23109 780 aa14.46□□□□□ -0.1
USF1-202ENST00000368020 ACAT1P24752 427 aaKnown RBP14.46□□□□□ -0.1
USF1-202ENST00000368020 CLCNKBP51801 687 aa14.46□□□□□ -0.1
USF1-202ENST00000368020 ATN1P54259 1190 aaPredicted RBP14.46□□□□□ -0.1
USF1-202ENST00000368020 TLE2Q04725 743 aa14.46□□□□□ -0.1
USF1-202ENST00000368020 SLC10A2Q12908 348 aaPredicted RBP14.46□□□□□ -0.1
USF1-202ENST00000368020 NAB1Q13506 487 aa14.46□□□□□ -0.1
USF1-202ENST00000368020 KBTBD12Q3ZCT8 623 aa14.46□□□□□ -0.1
USF1-202ENST00000368020 FYB2Q5VWT5 728 aa14.46□□□□□ -0.1
USF1-202ENST00000368020 TRAF7Q6Q0C0 670 aa14.46□□□□□ -0.1
USF1-202ENST00000368020 BEND5Q7L4P6 421 aa14.46□□□□□ -0.1
USF1-202ENST00000368020 CAND1Q86VP6 1230 aaKnown RBP14.46□□□□□ -0.1
USF1-202ENST00000368020 BANPQ8N9N5 519 aa14.46□□□□□ -0.1
USF1-202ENST00000368020 ZNF398Q8TD17 642 aa14.46□□□□□ -0.1
USF1-202ENST00000368020 PCED1BQ96HM7 432 aa14.46□□□□□ -0.1
USF1-202ENST00000368020 APOPT1Q96IL0 206 aa14.46□□□□□ -0.1
USF1-202ENST00000368020 EBNA1BP2Q99848 306 aaKnown RBP14.46□□□□□ -0.1
USF1-202ENST00000368020 RXFP1Q9HBX9 757 aa14.46□□□□□ -0.1
USF1-202ENST00000368020 CSNK1G1Q9HCP0 422 aa14.46□□□□□ -0.1
USF1-202ENST00000368020 PRKAG3Q9UGI9 489 aa14.46□□□□□ -0.1
USF1-202ENST00000368020 PATJQ8NI35 1801 aa14.45□□□□□ -0.1
USF1-202ENST00000368020 A0A0U1RQF3 1178 aa14.45□□□□□ -0.1
USF1-202ENST00000368020 CLDN5O00501 218 aa14.45□□□□□ -0.1
USF1-202ENST00000368020 LTFP02788 710 aa14.45□□□□□ -0.1
USF1-202ENST00000368020 SNRPAP09012 282 aaKnown RBP14.45□□□□□ -0.1
USF1-202ENST00000368020 CTSHP09668 335 aa14.45□□□□□ -0.1
USF1-202ENST00000368020 SELPP16109 830 aa14.45□□□□□ -0.1
USF1-202ENST00000368020 SERPINB6P35237 376 aa14.45□□□□□ -0.1
USF1-202ENST00000368020 ADRA1BP35368 520 aa14.45□□□□□ -0.1
USF1-202ENST00000368020 ATXN1P54253 815 aaKnown RBP14.45□□□□□ -0.1
USF1-202ENST00000368020 SLC18A2Q05940 514 aa14.45□□□□□ -0.1
USF1-202ENST00000368020 FAAP100Q0VG06 881 aa14.45□□□□□ -0.1
USF1-202ENST00000368020 DPYSQ14117 519 aa14.45□□□□□ -0.1
USF1-202ENST00000368020 EFTUD2Q15029 972 aaKnown RBP eCLIP14.45□□□□□ -0.13e-6■■■■□ 23.5
USF1-202ENST00000368020 TRIM60Q495X7 471 aa14.45□□□□□ -0.1
USF1-202ENST00000368020 ANKRD20A2Q5SQ80 823 aa14.45□□□□□ -0.1
USF1-202ENST00000368020 ANKRD20A1Q5TYW2 823 aa14.45□□□□□ -0.1
USF1-202ENST00000368020 ANKRD20A3Q5VUR7 823 aa14.45□□□□□ -0.1
USF1-202ENST00000368020 ZNF449Q6P9G9 518 aa14.45□□□□□ -0.1
USF1-202ENST00000368020 LVRNQ6Q4G3 990 aa14.45□□□□□ -0.1
USF1-202ENST00000368020 AGMOQ6ZNB7 445 aa14.45□□□□□ -0.1
USF1-202ENST00000368020 RFX8Q6ZV50 586 aa14.45□□□□□ -0.1
USF1-202ENST00000368020 CFAP36Q96G28 342 aa14.45□□□□□ -0.1
USF1-202ENST00000368020 ADAM33Q9BZ11 813 aa14.45□□□□□ -0.1
USF1-202ENST00000368020 ULBP1Q9BZM6 244 aa14.45□□□□□ -0.1
USF1-202ENST00000368020 TTLL3Q9Y4R7 772 aa14.45□□□□□ -0.1
USF1-202ENST00000368020 A0A1W2PPM1 405 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 FOXO6A8MYZ6 492 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 LPXNO60711 386 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 MX2P20592 715 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 CYP2C18P33260 490 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 SKIV2L2P42285 1042 aaKnown RBP14.44□□□□□ -0.1
USF1-202ENST00000368020 SCNN1GP51170 649 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 SETDB1Q15047 1291 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 ZKSCAN8Q15776 578 aaPredicted RBP14.44□□□□□ -0.1
USF1-202ENST00000368020 PARP6Q2NL67 630 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 OTUD1Q5VV17 481 aaPredicted RBP14.44□□□□□ -0.1
USF1-202ENST00000368020 CHSY1Q86X52 802 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 IGDCC3Q8IVU1 814 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 TRIM42Q8IWZ5 723 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 THEM5Q8N1Q8 247 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 SLC7A14Q8TBB6 771 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 MRRFQ96E11 262 aaKnown RBP14.44□□□□□ -0.1
USF1-202ENST00000368020 IQCGQ9H095 443 aaKnown RBP14.44□□□□□ -0.1
USF1-202ENST00000368020 MKS1Q9NXB0 559 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 FBXW11Q9UKB1 542 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 PADI3Q9ULW8 664 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 PHTF1Q9UMS5 762 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 PCDHA11Q9Y5I1 949 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 COL4A4P53420 1690 aaPredicted RBP14.44□□□□□ -0.1
USF1-202ENST00000368020 PTPRDP23468 1912 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 ERI2A8K979 691 aaKnown RBP14.44□□□□□ -0.1
USF1-202ENST00000368020 M0QZQ0 153 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 INPPL1O15357 1258 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 MFSD11O43934 449 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 EDF1O60869 148 aaKnown RBP14.44□□□□□ -0.1
USF1-202ENST00000368020 DCTN3O75935 186 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 ATP5HO75947 161 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 BEST1O76090 585 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 FOXN2P32314 431 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 HTR7P34969 479 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 NRLP54845 237 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 TPI1P60174 286 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 DNAJC3Q13217 504 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 NME3Q13232 169 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 TUSC3Q13454 348 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 DSC3Q14574 896 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 LPIN1Q14693 890 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 SPDYAQ5MJ70 313 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 LRRC8DQ7L1W4 858 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 CDKL2Q92772 493 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 VAT1Q99536 393 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 EPAS1Q99814 870 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms