RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 HMBSP08397 361 aa12.71□□□□□ -0.37
TPR-201ENST00000367478 AVPR1AP37288 418 aa12.71□□□□□ -0.37
TPR-201ENST00000367478 OLR1P78380 273 aa12.71□□□□□ -0.37
TPR-201ENST00000367478 EMC2Q15006 297 aa12.71□□□□□ -0.37
TPR-201ENST00000367478 BROXQ5VW32 411 aa12.71□□□□□ -0.37
TPR-201ENST00000367478 KYAT3Q6YP21 454 aaKnown RBP12.71□□□□□ -0.37
TPR-201ENST00000367478 FNDC5Q8NAU1 212 aa12.71□□□□□ -0.37
TPR-201ENST00000367478 FBXO36Q8NEA4 188 aa12.71□□□□□ -0.37
TPR-201ENST00000367478 CRELD1Q96HD1 420 aa12.71□□□□□ -0.37
TPR-201ENST00000367478 CDH9Q9ULB4 789 aa12.71□□□□□ -0.37
TPR-201ENST00000367478 SHOC2Q9UQ13 582 aa12.71□□□□□ -0.37
TPR-201ENST00000367478 ENTPD4Q9Y227 616 aa12.71□□□□□ -0.37
TPR-201ENST00000367478 ERGIC3Q9Y282 383 aa12.71□□□□□ -0.37
TPR-201ENST00000367478 ZMYM2Q9UBW7 1377 aa12.71□□□□□ -0.37
TPR-201ENST00000367478 HBP1O60381 514 aa12.71□□□□□ -0.37
TPR-201ENST00000367478 OLFML2AQ68BL7 652 aa12.71□□□□□ -0.37
TPR-201ENST00000367478 FAM49BQ9NUQ9 324 aa12.71□□□□□ -0.37
TPR-201ENST00000367478 E2F8A0AVK6 867 aa12.71□□□□□ -0.37
TPR-201ENST00000367478 OPLAHO14841 1288 aa12.71□□□□□ -0.37
TPR-201ENST00000367478 SNX4O95219 450 aa12.71□□□□□ -0.37
TPR-201ENST00000367478 TCEA2Q15560 299 aa12.71□□□□□ -0.37
TPR-201ENST00000367478 NAIF1Q69YI7 327 aaPredicted RBP12.71□□□□□ -0.37
TPR-201ENST00000367478 EIF3MQ7L2H7 374 aaKnown RBP12.71□□□□□ -0.37
TPR-201ENST00000367478 ZNF513Q8N8E2 541 aaPredicted RBP12.71□□□□□ -0.37
TPR-201ENST00000367478 OR56A4Q8NGH8 313 aa12.71□□□□□ -0.37
TPR-201ENST00000367478 BSNDQ8WZ55 320 aa12.71□□□□□ -0.37
TPR-201ENST00000367478 MAP3K14Q99558 947 aa12.71□□□□□ -0.37
TPR-201ENST00000367478 SENP2Q9HC62 589 aa12.71□□□□□ -0.37
TPR-201ENST00000367478 A1CFQ9NQ94 594 aaKnown RBP12.71□□□□□ -0.37
TPR-201ENST00000367478 LIMD1Q9UGP4 676 aa12.71□□□□□ -0.37
TPR-201ENST00000367478 ALDH7A1P49419 539 aaKnown RBP12.71□□□□□ -0.38
TPR-201ENST00000367478 HSF2Q03933 536 aa12.71□□□□□ -0.38
TPR-201ENST00000367478 CUL2Q13617 745 aa12.71□□□□□ -0.38
TPR-201ENST00000367478 PKN1Q16512 942 aa12.71□□□□□ -0.38
TPR-201ENST00000367478 ULK3Q6PHR2 472 aa12.71□□□□□ -0.38
TPR-201ENST00000367478 CBWD2Q8IUF1 395 aa12.71□□□□□ -0.38
TPR-201ENST00000367478 NEDD1Q8NHV4 660 aa12.71□□□□□ -0.38
TPR-201ENST00000367478 BBS4Q96RK4 519 aa12.71□□□□□ -0.38
TPR-201ENST00000367478 AASDHPPTQ9NRN7 309 aa12.71□□□□□ -0.38
TPR-201ENST00000367478 SMNDC1O75940 238 aaKnown RBP eCLIP12.71□□□□□ -0.38
TPR-201ENST00000367478 IRF1P10914 325 aa12.71□□□□□ -0.38
TPR-201ENST00000367478 PRG2P13727 222 aa12.71□□□□□ -0.38
TPR-201ENST00000367478 ADRA2BP18089 450 aa12.71□□□□□ -0.38
TPR-201ENST00000367478 ITGB3BPQ13352 177 aaPredicted RBP12.71□□□□□ -0.38
TPR-201ENST00000367478 FGD3Q5JSP0 725 aa12.71□□□□□ -0.38
TPR-201ENST00000367478 ABRAXAS1Q6UWZ7 409 aa12.71□□□□□ -0.38
TPR-201ENST00000367478 OXER1Q8TDS5 423 aa12.71□□□□□ -0.38
TPR-201ENST00000367478 CAVIN3Q969G5 261 aa12.71□□□□□ -0.38
TPR-201ENST00000367478 B3GALT6Q96L58 329 aa12.71□□□□□ -0.38
TPR-201ENST00000367478 SLC25A23Q9BV35 468 aa12.71□□□□□ -0.38
TPR-201ENST00000367478 ASAP1Q9ULH1 1129 aa12.71□□□□□ -0.38
TPR-201ENST00000367478 PTGES3LE9PB15 166 aa12.71□□□□□ -0.38
TPR-201ENST00000367478 SASH1O94885 1247 aa12.71□□□□□ -0.38
TPR-201ENST00000367478 NANOGNBQ7Z5D8 188 aa12.71□□□□□ -0.38
TPR-201ENST00000367478 STK32CQ86UX6 486 aa12.71□□□□□ -0.38
TPR-201ENST00000367478 LDHDQ86WU2 507 aa12.71□□□□□ -0.38
TPR-201ENST00000367478 UBE2E3Q969T4 207 aa12.71□□□□□ -0.38
TPR-201ENST00000367478 PAFAH2Q99487 392 aa12.71□□□□□ -0.38
TPR-201ENST00000367478 ADAM33Q9BZ11 813 aa12.71□□□□□ -0.38
TPR-201ENST00000367478 NUDT5Q9UKK9 219 aa12.71□□□□□ -0.38
TPR-201ENST00000367478 WBP11Q9Y2W2 641 aaKnown RBP12.71□□□□□ -0.38
TPR-201ENST00000367478 MGAT5Q09328 741 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 KLF6Q99612 283 aaPredicted RBP12.7□□□□□ -0.38
TPR-201ENST00000367478 CPNE1Q99829 537 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 TMEM260Q9NX78 707 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 USP18Q9UMW8 372 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 TBC1D30Q9Y2I9 924 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 APOC1P02654 83 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 HALP42357 657 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 SRP54P61011 504 aaKnown RBP12.7□□□□□ -0.38
TPR-201ENST00000367478 ARF5P84085 180 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 SPANXN3Q5MJ09 141 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 CYP1A1P04798 512 aaPredicted RBP12.7□□□□□ -0.38
TPR-201ENST00000367478 MYL9P24844 172 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 CDC42P60953 191 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 OVGP1Q12889 678 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 RIPOR1Q6ZS17 1223 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 GATAD2AQ86YP4 633 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 FAM20CQ8IXL6 584 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 PRDM16Q9HAZ2 1276 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 IGSF1Q8N6C5 1336 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 MDM4O15151 490 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 SGTAO43765 313 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 CYP2C9P11712 490 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 ATN1P54259 1190 aaPredicted RBP12.7□□□□□ -0.38
TPR-201ENST00000367478 SPDYCQ5MJ68 293 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 RIT2Q99578 217 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 SEPHS2Q99611 448 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 SHCBP1LQ9BZQ2 653 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 DDX18Q9NVP1 670 aaKnown RBP12.7□□□□□ -0.38
TPR-201ENST00000367478 ARAP3Q8WWN8 1544 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 VBP1P61758 197 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 PLIN5Q00G26 463 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 PAGE2BQ5JRK9 111 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 SKA1Q96BD8 255 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 COLEC11Q9BWP8 271 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 TAS2R13Q9NYV9 303 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 CPDO75976 1380 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 M0QYT0 321 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 STAU1O95793 577 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms