RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 SPC25Q9HBM1 224 aa9.62□□□□□ -0.87
CNIH4-202ENST00000366857 DMAP1Q9NPF5 467 aaPredicted RBP9.62□□□□□ -0.87
CNIH4-202ENST00000366857 CASS4Q9NQ75 786 aa9.62□□□□□ -0.87
CNIH4-202ENST00000366857 GPATCH2LQ9NWQ4 482 aa9.62□□□□□ -0.87
CNIH4-202ENST00000366857 KBTBD13C9JR72 458 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 GOLGA8SH3BPF8 625 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 ARNTP27540 789 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 RBL1P28749 1068 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 LMNB2Q03252 620 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 CNTN4Q8IWV2 1026 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 SH2D3CQ8N5H7 860 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 CCDC89Q8N998 374 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 RAET1EQ8TD07 263 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 HS3ST4Q9Y661 456 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 POU2F2P09086 479 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 MTMR3Q13615 1198 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 SLC14A2Q15849 920 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 IZUMO3Q5VZ72 239 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 OR52K2Q8NGK3 314 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 RNF139Q8WU17 664 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 DPH5Q9H2P9 285 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 ACSS3Q9H6R3 686 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 ZWILCHQ9H900 591 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 ARNT2Q9HBZ2 717 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 XPO7Q9UIA9 1087 aaKnown RBP9.61□□□□□ -0.87
CNIH4-202ENST00000366857 MTUS1Q9ULD2 1270 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 ZCWPW2A0A1B0GU75 182 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 ARHGEF37A1IGU5 675 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 OR6C75A6NL08 312 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 BANF1O75531 89 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 AP1G2O75843 785 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 EPHA5P54756 1037 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 NAP1L1P55209 391 aaKnown RBP9.61□□□□□ -0.87
CNIH4-202ENST00000366857 TIAL1Q01085 375 aaKnown RBP eCLIP9.61□□□□□ -0.87
CNIH4-202ENST00000366857 SMARCB1Q12824 385 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 BRMS1LQ5PSV4 323 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 BSPRYQ5W0U4 402 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 OVOS1Q6IE37 1185 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 TIFABQ6ZNK6 161 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 TMEM135Q86UB9 458 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 TRABD2AQ86V40 505 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 IGSF21Q96ID5 467 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 APOL6Q9BWW8 343 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 ZNF180Q9UJW8 692 aa9.61□□□□□ -0.87
CNIH4-202ENST00000366857 LCP1P13796 627 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 PTPN3P26045 913 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 PCSK1P29120 753 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 CTCFP49711 727 aaPredicted RBP9.6□□□□□ -0.87
CNIH4-202ENST00000366857 BCAR1P56945 870 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 WDR5P61964 334 aaKnown RBP9.6□□□□□ -0.87
CNIH4-202ENST00000366857 SNX1Q13596 522 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 FAM182AQ5T1J6 154 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 MPP5Q8N3R9 675 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 PGBD5Q8N414 524 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 ZBP1Q9H171 429 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 SNX25Q9H3E2 840 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 TMEM248Q9NWD8 314 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 CEP83Q9Y592 693 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 CKAP5Q14008 2032 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 MYO15AQ9UKN7 3530 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 GOLGA6L10A0A0M3HER8 536 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 MOSPD3O75425 235 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 ASMTLO95671 621 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 BDNFP23560 247 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 PLTPP55058 493 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 ACVR1Q04771 509 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 OR6B2Q6IFH4 312 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 C4orf22Q6V702 233 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 PRPF39Q86UA1 669 aaKnown RBP9.6□□□□□ -0.87
CNIH4-202ENST00000366857 CMTR2Q8IYT2 770 aaKnown RBP9.6□□□□□ -0.87
CNIH4-202ENST00000366857 ZNF567Q8N184 647 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 RIN3Q8TB24 985 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 IFT81Q8WYA0 676 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 TRIB3Q96RU7 358 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 CTNNAL1Q9UBT7 734 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 FOXO6A8MYZ6 492 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 M0QZ92 97 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 CD19P15391 556 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 SDC4P31431 198 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 CYP2C18P33260 490 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 GARSP41250 739 aaKnown RBP9.6□□□□□ -0.87
CNIH4-202ENST00000366857 DNA2P51530 1060 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 YWHAGP61981 247 aaKnown RBP eCLIP9.6□□□□□ -0.87
CNIH4-202ENST00000366857 LRRC8BQ6P9F7 803 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 FOXR1Q6PIV2 292 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 C14orf80Q86SX3 495 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 CLEC14AQ86T13 490 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 DDX53Q86TM3 631 aaKnown RBP9.6□□□□□ -0.87
CNIH4-202ENST00000366857 LRRC45Q96CN5 670 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 PRICKLE1Q96MT3 831 aaPredicted RBP9.6□□□□□ -0.87
CNIH4-202ENST00000366857 TRIM6Q9C030 488 aaPredicted RBP9.6□□□□□ -0.87
CNIH4-202ENST00000366857 NR2E3Q9Y5X4 410 aa9.6□□□□□ -0.87
CNIH4-202ENST00000366857 C10orf142B7Z368 130 aa9.59□□□□□ -0.87
CNIH4-202ENST00000366857 AGTP01019 485 aa9.59□□□□□ -0.87
CNIH4-202ENST00000366857 OR4Q2P0C623 313 aa9.59□□□□□ -0.87
CNIH4-202ENST00000366857 DNAJB1P25685 340 aa9.59□□□□□ -0.87
CNIH4-202ENST00000366857 ARCN1P48444 511 aaKnown RBP9.59□□□□□ -0.87
CNIH4-202ENST00000366857 MLLT6P55198 1093 aaPredicted RBP9.59□□□□□ -0.87
CNIH4-202ENST00000366857 MAPRE1Q15691 268 aaKnown RBP9.59□□□□□ -0.87
CNIH4-202ENST00000366857 KDELC1Q6UW63 502 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms