RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 ATP5DP30049 168 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 MSX2P35548 267 aaPredicted RBP4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 CD97P48960 835 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 LMAN1P49257 510 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 CHN2P52757 468 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 RAD23AP54725 363 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 FAM3BP58499 235 aaPredicted RBP4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 EIF4A1P60842 406 aaKnown RBP4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 RPL15P61313 204 aaKnown RBP4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TLE3Q04726 772 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 GOLGA8DPQ0D2H9 430 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 NEXNQ0ZGT2 675 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 MTAPQ13126 283 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 CBFBQ13951 182 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 COG2Q14746 738 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 NAA25Q14CX7 972 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ST3GAL2Q16842 350 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 RNF151Q2KHN1 245 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 RUNDC3AQ59EK9 446 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ODF2Q5BJF6 829 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 BMP2KLQ5H9B9 411 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 RAB41Q5JT25 222 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 PRSS36Q5K4E3 855 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ZNF362Q5T0B9 420 aaPredicted RBP4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 FAM90A2PQ658T7 463 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 KLHL35Q6PF15 583 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 C11orf88Q6PI97 169 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 SARM1Q6SZW1 724 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 MTHFD1LQ6UB35 978 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 MFSD6Q6ZSS7 791 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 RRM2BQ7LG56 351 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 SLFN11Q7Z7L1 901 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ADGRA1Q86SQ6 560 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ATG4DQ86TL0 474 aaPredicted RBP4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 CEP57L1Q8IYX8 460 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 C11orf44Q8N8P7 122 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 GOT1L1Q8NHS2 421 aaPredicted RBP4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 OSCP1Q8WVF1 389 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 RSPH1Q8WYR4 309 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 SMOC2Q9H3U7 446 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 KAT14Q9H8E8 782 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 MRPL15Q9P015 296 aaKnown RBP4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 MARCH4Q9P2E8 410 aaPredicted RBP4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 SUCLA2Q9P2R7 463 aaPredicted RBP4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 MTRRQ9UBK8 725 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 SEL1LQ9UBV2 794 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ZNF70Q9UC06 446 aaPredicted RBP4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 SLCO3A1Q9UIG8 710 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 RAB21Q9UL25 225 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 SLC12A4Q9UP95 1085 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 SORCS3Q9UPU3 1222 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 FAM169AQ9Y6X4 670 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 FLT1P17948 1338 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 A0A1W2PQM1 296 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 F5H697 171 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 H0Y626 953 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 M0QYT0 321 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 HNRNPCL1O60812 293 aaKnown RBP3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 MFAP3LO75121 409 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TBX10O75333 385 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 SUN1O94901 812 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 METTL18O95568 372 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 PLA2G1BP04054 148 aaKnown RBP3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 URODP06132 367 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 RARGP13631 454 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 GLDCP23378 1020 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 PSMA3P25788 255 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ADORA2AP29274 412 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 CD6P30203 668 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ICAM3P32942 547 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 GARSP41250 739 aaKnown RBP3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 CPA2P48052 419 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 LIMS1P48059 325 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 CTCFP49711 727 aaPredicted RBP3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 NDUFV1P49821 464 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ANXA11P50995 505 aaKnown RBP3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 UBXN2AP68543 259 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 RBP5P82980 135 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 PPARDQ03181 441 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 BFSP1Q12934 665 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 BFSP2Q13515 415 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TNFAIP1Q13829 316 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 HLXQ14774 488 aaPredicted RBP3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 MED22Q15528 200 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 CSRP2Q16527 193 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 KCNMB1Q16558 191 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 CDC73Q6P1J9 531 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 PLBD1Q6P4A8 553 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 FAM47EQ6ZV65 393 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 CLNKQ7Z7G1 428 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ZSWIM9Q86XI8 627 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 SCN4BQ8IWT1 228 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 KIAA2013Q8IYS2 634 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 IZUMO1Q8IYV9 350 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 SCML4Q8N228 414 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ZNF483Q8TF39 744 aaPredicted RBP3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 NPIPB3Q92617 1050 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 FAM149B1Q96BN6 582 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 RNFT2Q96EX2 444 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 PERPQ96FX8 193 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms