RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 TKTL2Q9H0I9 626 aa13.96□□□□□ -0.17
CCDC197-201ENST00000359253 NEUROG2Q9H2A3 272 aa13.96□□□□□ -0.17
CCDC197-201ENST00000359253 PAK5Q9P286 719 aa13.96□□□□□ -0.17
CCDC197-201ENST00000359253 HCSTQ9UBK5 93 aa13.96□□□□□ -0.17
CCDC197-201ENST00000359253 SLC12A6Q9UHW9 1150 aa13.96□□□□□ -0.17
CCDC197-201ENST00000359253 SHOC2Q9UQ13 582 aa13.96□□□□□ -0.17
CCDC197-201ENST00000359253 LZTS1Q9Y250 596 aa13.96□□□□□ -0.17
CCDC197-201ENST00000359253 TLR6Q9Y2C9 796 aa13.96□□□□□ -0.17
CCDC197-201ENST00000359253 A0A1W2PQH9 124 aa13.95□□□□□ -0.18
CCDC197-201ENST00000359253 ARHGEF15O94989 841 aa13.95□□□□□ -0.18
CCDC197-201ENST00000359253 ZDHHC11BP0C7U3 371 aa13.95□□□□□ -0.18
CCDC197-201ENST00000359253 CSH1P0DML2 217 aa13.95□□□□□ -0.18
CCDC197-201ENST00000359253 CSH2P0DML3 217 aa13.95□□□□□ -0.18
CCDC197-201ENST00000359253 PECAM1P16284 738 aaPredicted RBP13.95□□□□□ -0.18
CCDC197-201ENST00000359253 GOT1P17174 413 aa13.95□□□□□ -0.18
CCDC197-201ENST00000359253 PBX3P40426 434 aa13.95□□□□□ -0.18
CCDC197-201ENST00000359253 ITGA8P53708 1063 aa13.95□□□□□ -0.18
CCDC197-201ENST00000359253 TPI1P60174 286 aa13.95□□□□□ -0.18
CCDC197-201ENST00000359253 PITX1P78337 314 aaPredicted RBP13.95□□□□□ -0.18
CCDC197-201ENST00000359253 ZNF33AQ06730 810 aa13.95□□□□□ -0.18
CCDC197-201ENST00000359253 GPM6BQ13491 265 aa13.95□□□□□ -0.18
CCDC197-201ENST00000359253 DPYSQ14117 519 aa13.95□□□□□ -0.18
CCDC197-201ENST00000359253 SLC45A4Q5BKX6 768 aa13.95□□□□□ -0.18
CCDC197-201ENST00000359253 IZUMO3Q5VZ72 239 aa13.95□□□□□ -0.18
CCDC197-201ENST00000359253 PDE12Q6L8Q7 609 aaKnown RBP13.95□□□□□ -0.18
CCDC197-201ENST00000359253 PRSS55Q6UWB4 352 aaPredicted RBP13.95□□□□□ -0.18
CCDC197-201ENST00000359253 RSPO2Q6UXX9 243 aaPredicted RBP13.95□□□□□ -0.18
CCDC197-201ENST00000359253 RFX8Q6ZV50 586 aa13.95□□□□□ -0.18
CCDC197-201ENST00000359253 LZTR1Q8N653 840 aa13.95□□□□□ -0.18
CCDC197-201ENST00000359253 B3GALT6Q96L58 329 aa13.95□□□□□ -0.18
CCDC197-201ENST00000359253 CLSTN3Q9BQT9 956 aa13.95□□□□□ -0.18
CCDC197-201ENST00000359253 PABPC3Q9H361 631 aaKnown RBP13.95□□□□□ -0.18
CCDC197-201ENST00000359253 RETREG1Q9H6L5 497 aa13.95□□□□□ -0.18
CCDC197-201ENST00000359253 ARHGEF4Q9NR80 690 aa13.95□□□□□ -0.18
CCDC197-201ENST00000359253 MRPL17Q9NRX2 175 aaKnown RBP13.95□□□□□ -0.18
CCDC197-201ENST00000359253 PLXNA3P51805 1871 aa13.95□□□□□ -0.18
CCDC197-201ENST00000359253 SYNJ2BP-COX16A0A087WUM0 186 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 SLC38A8A6NNN8 435 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 PPP1R12AO14974 1030 aaPredicted RBP13.94□□□□□ -0.18
CCDC197-201ENST00000359253 EIF3HO15372 352 aaKnown RBP eCLIP13.94□□□□□ -0.18
CCDC197-201ENST00000359253 FGF10O15520 208 aaPredicted RBP13.94□□□□□ -0.18
CCDC197-201ENST00000359253 MTSS1O43312 755 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 STK10O94804 968 aaKnown RBP13.94□□□□□ -0.18
CCDC197-201ENST00000359253 VNN2O95498 520 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 IFNB1P01574 187 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 MX2P20592 715 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 AMPD1P23109 780 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 ELF1P32519 619 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 CTNNB1P35222 781 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 HSD17B3P37058 310 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 ALDH1A3P47895 512 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 PMS2P54278 862 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 GPS1Q13098 491 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 CBLBQ13191 982 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 PLD1Q13393 1074 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 NCBP2-AS2Q69YL0 99 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 KLHDC10Q6PID8 442 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 C1orf228Q6PIY5 440 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 PPP1R21Q6ZMI0 780 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 Q7L0L9 218 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 PPIL6Q8IXY8 311 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 ZCCHC9Q8N567 271 aaKnown RBP13.94□□□□□ -0.18
CCDC197-201ENST00000359253 TRMT2BQ96GJ1 504 aaKnown RBP13.94□□□□□ -0.18
CCDC197-201ENST00000359253 MYRFLQ96LU7 910 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 GDAP1L1Q96MZ0 367 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 VN1R3Q9BXE9 311 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 PRDM12Q9H4Q4 367 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 CATSPERBQ9H7T0 1116 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 RXFP1Q9HBX9 757 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.94□□□□□ -0.18
CCDC197-201ENST00000359253 COX16Q9P0S2 106 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 SAE1Q9UBE0 346 aaPredicted RBP13.94□□□□□ -0.18
CCDC197-201ENST00000359253 OR12D3Q9UGF7 316 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 SLC27A5Q9Y2P5 690 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 HEY1Q9Y5J3 304 aa13.94□□□□□ -0.18
CCDC197-201ENST00000359253 C5orf60A6NFR6 353 aa13.93□□□□□ -0.18
CCDC197-201ENST00000359253 KCNU1A8MYU2 1149 aa13.93□□□□□ -0.18
CCDC197-201ENST00000359253 GOLGA8KD6RF30 607 aa13.93□□□□□ -0.18
CCDC197-201ENST00000359253 DCLK1O15075 740 aa13.93□□□□□ -0.18
CCDC197-201ENST00000359253 CREB3O43889 395 aa13.93□□□□□ -0.18
CCDC197-201ENST00000359253 LPXNO60711 386 aa13.93□□□□□ -0.18
CCDC197-201ENST00000359253 GCATO75600 419 aa13.93□□□□□ -0.18
CCDC197-201ENST00000359253 C1RP00736 705 aa13.93□□□□□ -0.18
CCDC197-201ENST00000359253 NUDT17P0C025 328 aa13.93□□□□□ -0.18
CCDC197-201ENST00000359253 HOXC13P31276 330 aa13.93□□□□□ -0.18
CCDC197-201ENST00000359253 RING1Q06587 406 aa13.93□□□□□ -0.18
CCDC197-201ENST00000359253 IFRD2Q12894 506 aaPredicted RBP13.93□□□□□ -0.18
CCDC197-201ENST00000359253 TAF10Q12962 218 aa13.93□□□□□ -0.18
CCDC197-201ENST00000359253 VEPH1Q14D04 833 aa13.93□□□□□ -0.18
CCDC197-201ENST00000359253 TRIP13Q15645 432 aaPredicted RBP13.93□□□□□ -0.18
CCDC197-201ENST00000359253 TRIP4Q15650 581 aaPredicted RBP13.93□□□□□ -0.18
CCDC197-201ENST00000359253 RTL10Q7L3V2 364 aa13.93□□□□□ -0.18
CCDC197-201ENST00000359253 ZC3H18Q86VM9 953 aaKnown RBP13.93□□□□□ -0.18
CCDC197-201ENST00000359253 LRRC49Q8IUZ0 686 aa13.93□□□□□ -0.18
CCDC197-201ENST00000359253 UNC45BQ8IWX7 931 aa13.93□□□□□ -0.18
CCDC197-201ENST00000359253 TCEAL8Q8IYN2 117 aa13.93□□□□□ -0.18
CCDC197-201ENST00000359253 VPS52Q8N1B4 723 aa13.93□□□□□ -0.18
CCDC197-201ENST00000359253 ATP6V0D2Q8N8Y2 350 aa13.93□□□□□ -0.18
CCDC197-201ENST00000359253 KLHL23Q8NBE8 558 aa13.93□□□□□ -0.18
CCDC197-201ENST00000359253 TSEN2Q8NCE0 465 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms