RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 CYP2R1Q6VVX0 501 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 APLFQ8IW19 511 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 PYROXD2Q8N2H3 581 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 PHTF2Q8N3S3 785 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 PCDH20Q8N6Y1 951 aaKnown RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 SNX31Q8N9S9 440 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 DIS3LQ8TF46 1054 aaKnown RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 C7orf26Q96N11 449 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 NR1H4Q96RI1 486 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 EPAS1Q99814 870 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 CCT7Q99832 543 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 GCOM2Q9BZD3 368 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 C20orf27Q9GZN8 174 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 FAM192AQ9GZU8 254 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 C2orf40Q9H1Z8 148 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 PCDH18Q9HCL0 1135 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 CYP4F12Q9HCS2 524 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 IARS2Q9NSE4 1012 aaKnown RBP6.76□□□□□ -1.33
CSDE1-203ENST00000358528 STK32BQ9NY57 414 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 GGA3Q9NZ52 723 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 KLK14Q9P0G3 267 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 CDH22Q9UJ99 828 aa6.76□□□□□ -1.33
CSDE1-203ENST00000358528 A0A096LPK6 155 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 C15orf38-AP3S2A0A0A6YYH1 394 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 CASQ2O14958 399 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-203ENST00000358528 AMHP03971 560 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 COX4I1P13073 169 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 UQCRBP14927 111 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 VAV1P15498 845 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 GOT1P17174 413 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 TGM2P21980 687 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 ADORA2AP29274 412 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 CDK7P50613 346 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 CHN2P52757 468 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 ITKQ08881 620 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 TBCCQ15814 346 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 GSTA3Q16772 222 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 GJC2Q5T442 439 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-203ENST00000358528 LRRC8EQ6NSJ5 796 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 RWDD4Q6NW29 188 aaKnown RBP6.75□□□□□ -1.33
CSDE1-203ENST00000358528 ARPINQ7Z6K5 226 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 OR52K1Q8NGK4 314 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 PCDH19Q8TAB3 1148 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 SPATA16Q9BXB7 569 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 SIK2Q9H0K1 926 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 NRDE2Q9H7Z3 1164 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 DMAP1Q9NPF5 467 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-203ENST00000358528 DPP3Q9NY33 737 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 DCDC2Q9UHG0 476 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 AURKCQ9UQB9 309 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 MFHAS1Q9Y4C4 1052 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 SNX13Q9Y5W8 968 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 CDY2AQ9Y6F7 541 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 CDY1Q9Y6F8 540 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 F8W8V4 182 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 RNF103O00237 685 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 TRDMT1O14717 391 aaKnown RBP6.75□□□□□ -1.33
CSDE1-203ENST00000358528 PAPSS1O43252 624 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-203ENST00000358528 RFPL1O75677 317 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 ITGA2BP08514 1039 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 TXNP10599 105 aaKnown RBP6.75□□□□□ -1.33
CSDE1-203ENST00000358528 SPRP35270 261 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-203ENST00000358528 ASPAP45381 313 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 NAGLUP54802 743 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 ABCE1P61221 599 aaKnown RBP6.75□□□□□ -1.33
CSDE1-203ENST00000358528 MRPS5P82675 430 aaKnown RBP6.75□□□□□ -1.33
CSDE1-203ENST00000358528 RBP5P82980 135 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 SLC18A2Q05940 514 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 WASHC5Q12768 1159 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 PDK2Q15119 407 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 XRRA1Q6P2D8 792 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 ZPBP2Q6X784 338 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 BNC2Q6ZN30 1099 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-203ENST00000358528 IFNEQ86WN2 208 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 FBXO16Q8IX29 292 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-203ENST00000358528 SIX6OS1Q8N1H7 587 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 C1orf127Q8N9H9 656 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 SLC4A11Q8NBS3 891 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 BHLHE22Q8NFJ8 381 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-203ENST00000358528 HTR3CQ8WXA8 447 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 ILKAPQ9H0C8 392 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-203ENST00000358528 CDT1Q9H211 546 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 DHX33Q9H6R0 707 aaKnown RBP6.75□□□□□ -1.33
CSDE1-203ENST00000358528 COG4Q9H9E3 785 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 POPDC2Q9HBU9 364 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 CYLDQ9NQC7 956 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 POMPQ9Y244 141 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 COMMD10Q9Y6G5 202 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 RGS20O76081 388 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 ETV4P43268 484 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 RPS6KA2Q15349 733 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 HSDL1Q3SXM5 330 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 ANKRD20A4Q4UJ75 823 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 C6orf52Q5T4I8 152 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 PPP1R26Q5T8A7 1209 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-203ENST00000358528 PACS1Q6VY07 963 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 FRMD7Q6ZUT3 714 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 ZNF781Q8N8C0 355 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 CLEC4CQ8WTT0 213 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 RCN3Q96D15 328 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms