RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 PRUNE2Q8WUY3 3088 aa14.77□□□□□ -0.05
NIPAL3-203ENST00000358028 TTC3P53804 2025 aa14.77□□□□□ -0.05
NIPAL3-203ENST00000358028 GRXCR1A8MXD5 290 aa14.76□□□□□ -0.05
NIPAL3-203ENST00000358028 HNRNPCL1O60812 293 aaKnown RBP14.76□□□□□ -0.05
NIPAL3-203ENST00000358028 FAM155BO75949 473 aa14.76□□□□□ -0.05
NIPAL3-203ENST00000358028 ZFXP17010 805 aaPredicted RBP14.76□□□□□ -0.05
NIPAL3-203ENST00000358028 ATXN1P54253 815 aaKnown RBP14.76□□□□□ -0.05
NIPAL3-203ENST00000358028 DEFB103AP81534 67 aa14.76□□□□□ -0.05
NIPAL3-203ENST00000358028 SMAD3P84022 425 aaKnown RBP14.76□□□□□ -0.05
NIPAL3-203ENST00000358028 IKBKEQ14164 716 aa14.76□□□□□ -0.05
NIPAL3-203ENST00000358028 TMCO2Q7Z6W1 182 aaPredicted RBP14.76□□□□□ -0.05
NIPAL3-203ENST00000358028 AGGF1Q8N302 714 aaeCLIP14.76□□□□□ -0.05
NIPAL3-203ENST00000358028 TOP6BLQ8N6T0 577 aa14.76□□□□□ -0.05
NIPAL3-203ENST00000358028 BANPQ8N9N5 519 aa14.76□□□□□ -0.05
NIPAL3-203ENST00000358028 INPP5DQ92835 1189 aa14.76□□□□□ -0.05
NIPAL3-203ENST00000358028 APBB2Q92870 758 aa14.76□□□□□ -0.05
NIPAL3-203ENST00000358028 TMEM237Q96Q45 408 aa14.76□□□□□ -0.05
NIPAL3-203ENST00000358028 KCTD15Q96SI1 283 aaPredicted RBP14.76□□□□□ -0.05
NIPAL3-203ENST00000358028 ADAM33Q9BZ11 813 aa14.76□□□□□ -0.05
NIPAL3-203ENST00000358028 LRMDAQ9H2I8 198 aa14.76□□□□□ -0.05
NIPAL3-203ENST00000358028 MTIF3Q9H2K0 278 aaKnown RBP14.76□□□□□ -0.05
NIPAL3-203ENST00000358028 ETNK2Q9NVF9 386 aa14.76□□□□□ -0.05
NIPAL3-203ENST00000358028 GRID1Q9ULK0 1009 aa14.76□□□□□ -0.05
NIPAL3-203ENST00000358028 AP4E1Q9UPM8 1137 aa14.76□□□□□ -0.05
NIPAL3-203ENST00000358028 SQORQ9Y6N5 450 aa14.76□□□□□ -0.05
NIPAL3-203ENST00000358028 ABHD14A-ACY1A0A1B0GW23 586 aa14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 XPO1O14980 1071 aaKnown RBP14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 GSTA2P09210 222 aa14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 TROVE2P10155 538 aaKnown RBP eCLIP14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 CCND1P24385 295 aa14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 TKTP29401 623 aaKnown RBP14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 MAGEA6P43360 314 aa14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 YWHAZP63104 245 aaKnown RBP14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 SLC45A4Q5BKX6 768 aa14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 EFHC1Q5JVL4 640 aa14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 STRADAQ7RTN6 431 aa14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 CEP57Q86XR8 500 aa14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 C10orf82Q8WW14 230 aa14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 LINC01599Q8WXQ3 324 aa14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 KLC2Q9H0B6 622 aa14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 MYLK2Q9H1R3 596 aa14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 MCM8Q9UJA3 840 aa14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 IKBKGQ9Y6K9 419 aa14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 SLC4A7Q9Y6M7 1214 aa14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 MAP3K6O95382 1288 aa14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 MT-ND3P03897 115 aa14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 KRT16P08779 473 aa14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 LRPAP1P30533 357 aa14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 RASSF2P50749 326 aa14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 LILRA4P59901 499 aa14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 YWHAGP61981 247 aaKnown RBP eCLIP14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 SYCP2LQ5T4T6 812 aa14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 FAXCQ5TGI0 409 aa14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 CHSY1Q86X52 802 aa14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 CCDC185Q8N715 623 aa14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 B3GALNT2Q8NCR0 500 aa14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 SLC44A1Q8WWI5 657 aa14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 GUCD1Q96NT3 240 aa14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 QKIQ96PU8 341 aaKnown RBP eCLIP14.75□□□□□ -0.052e-11■■■□□ 18.2
NIPAL3-203ENST00000358028 HNRNPABQ99729 332 aaKnown RBP14.75□□□□□ -0.05
NIPAL3-203ENST00000358028 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 TCRBV9S1A1TA0A576 114 aa14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 C2CD2LO14523 706 aa14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 PTGESO14684 152 aa14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 DAB1O75553 588 aa14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 PIAS1O75925 651 aa14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 IL1BP01584 269 aa14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 MATKP42679 507 aa14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 NR2C2P49116 596 aa14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 SULT1E1P49888 294 aa14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 GBE1Q04446 702 aa14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 SLC18A2Q05940 514 aa14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 FAM182AQ5T1J6 154 aa14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 TWF2Q6IBS0 349 aaKnown RBP14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 OTOAQ7RTW8 1153 aa14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 PIGZQ86VD9 579 aa14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 CCDC110Q8TBZ0 833 aa14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 LRRC39Q96DD0 335 aa14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 CFAP36Q96G28 342 aa14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 CSPG4P5Q96PW8 444 aa14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 DUSP16Q9BY84 665 aa14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 MAGEB5Q9BZ81 275 aa14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 EBF2Q9HAK2 575 aa14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 ETNK1Q9HBU6 452 aa14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 SLCO1B3Q9NPD5 702 aa14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 SAR1AQ9NR31 198 aa14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 ST3GAL5Q9UNP4 418 aa14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 CHKBQ9Y259 395 aa14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 NLRC5Q86WI3 1866 aa14.74□□□□□ -0.05
NIPAL3-203ENST00000358028 TRDMT1O14717 391 aaKnown RBP14.73□□□□□ -0.05
NIPAL3-203ENST00000358028 MGEA5O60502 916 aa14.73□□□□□ -0.05
NIPAL3-203ENST00000358028 AVILO75366 819 aa14.73□□□□□ -0.05
NIPAL3-203ENST00000358028 GCATO75600 419 aa14.73□□□□□ -0.05
NIPAL3-203ENST00000358028 INHBAP08476 426 aa14.73□□□□□ -0.05
NIPAL3-203ENST00000358028 FAM163BP0C2L3 166 aa14.73□□□□□ -0.05
NIPAL3-203ENST00000358028 PBX2P40425 430 aa14.73□□□□□ -0.05
NIPAL3-203ENST00000358028 ADIGQ0VDE8 80 aa14.73□□□□□ -0.05
NIPAL3-203ENST00000358028 SLC10A2Q12908 348 aaPredicted RBP14.73□□□□□ -0.05
NIPAL3-203ENST00000358028 DEFB106AQ8N104 65 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms