RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 VPS37AQ8NEZ2 397 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 RHOBTB2Q9BYZ6 727 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 GMIPQ9P107 970 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 AURKCQ9UQB9 309 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 A0A087X1B8 175 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 A0A0A0MRY4 1105 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 SUPT3HO75486 399 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 ALDH9A1P49189 494 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 RPL14P50914 215 aaKnown RBP4.21□□□□□ -1.73
SYNE2-204ENST00000358025 PEX3P56589 373 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 TRAF3Q13114 568 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 PSMD6Q15008 389 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 SPOCD1Q6ZMY3 1216 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 SPATA13Q96N96 652 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 TMEM134Q9H6X4 195 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 NMRAL1Q9HBL8 299 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 IDH3AP50213 366 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 HNRNPFP52597 415 aaKnown RBP4.21□□□□□ -1.73
SYNE2-204ENST00000358025 ADCY1Q08828 1119 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 TRIM25Q14258 630 aaKnown RBP4.21□□□□□ -1.73
SYNE2-204ENST00000358025 RFWD2Q8NHY2 731 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 RASGRP4Q8TDF6 673 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 C10orf82Q8WW14 230 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 SLC9A7Q96T83 725 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 ENTPD7Q9NQZ7 604 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 CLOCKO15516 846 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 CD151P48509 253 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 ZDHHC24Q6UX98 284 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 CDH24Q86UP0 819 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 DENND1AQ8TEH3 1009 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 ZNF347Q96SE7 839 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 HSD17B14Q9BPX1 270 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 LZTS1Q9Y250 596 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 A0A0B4J269 797 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 RNF103O00237 685 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 CLPXO76031 633 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 FSCN1Q16658 493 aaKnown RBP4.21□□□□□ -1.74
SYNE2-204ENST00000358025 PEX5LQ8IYB4 626 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 ZNF786Q8N393 782 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 RETREG1Q9H6L5 497 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 WDR41Q9HAD4 459 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 LRRC4CQ9HCJ2 640 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 TYROBPO43914 113 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 TBX10O75333 385 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 FLT3P36888 993 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 KPNA1P52294 538 aaPredicted RBP4.21□□□□□ -1.74
SYNE2-204ENST00000358025 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.21□□□□□ -1.74
SYNE2-204ENST00000358025 ELMOD1Q8N336 334 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 OR2T34Q8NGX1 318 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 OR2T3Q8NH03 318 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 PSPC1Q8WXF1 523 aaKnown RBP4.21□□□□□ -1.74
SYNE2-204ENST00000358025 RMND5AQ9H871 391 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 PCDHB8Q9UN66 801 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 CENPXA8MT69 81 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 H3BMM5 538 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 GSTA4O15217 222 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 PGAM1P18669 254 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 ATP5F1P24539 256 aaPredicted RBP4.21□□□□□ -1.74
SYNE2-204ENST00000358025 CNTN2Q02246 1040 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 MMRN1Q13201 1228 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 FASTKQ14296 549 aaKnown RBP4.21□□□□□ -1.74
SYNE2-204ENST00000358025 GET4Q7L5D6 327 aaPredicted RBP4.21□□□□□ -1.74
SYNE2-204ENST00000358025 DEPDC4Q8N2C3 294 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 URGCPQ8TCY9 931 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 SLITRK1Q96PX8 696 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 RBBP8Q99708 897 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 SLIT3O75094 1523 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 PP2D1A8MPX8 630 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 NUDT2P50583 147 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 SCARF1Q14162 830 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 ZBTB41Q5SVQ8 909 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 OLFML2BQ68BL8 750 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 PI16Q6UXB8 463 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 CCDC24Q8N4L8 307 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 KBTBD8Q8NFY9 601 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 CXorf21Q9HAI6 301 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 MTF2Q9Y483 593 aaPredicted RBP4.21□□□□□ -1.74
SYNE2-204ENST00000358025 ZSCAN5CA6NGD5 496 aaPredicted RBP4.21□□□□□ -1.74
SYNE2-204ENST00000358025 INTS6LQ5JSJ4 861 aaKnown RBP4.21□□□□□ -1.74
SYNE2-204ENST00000358025 BORCS6Q96GS4 357 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 FAM111AQ96PZ2 611 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 ADAM7Q9H2U9 754 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 IFT52Q9Y366 437 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 DHRS4L1P0CG22 281 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 CYP24A1Q07973 514 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 CUL2Q13617 745 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 ZNF606Q8WXB4 792 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 PRRG3Q9BZD7 231 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 RBAKQ9NYW8 714 aaPredicted RBP4.21□□□□□ -1.74
SYNE2-204ENST00000358025 PKD2L1Q9P0L9 805 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 POLG2Q9UHN1 485 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 CPSF3Q9UKF6 684 aaKnown RBP4.21□□□□□ -1.74
SYNE2-204ENST00000358025 SOAT2O75908 522 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 MYDGFQ969H8 173 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 SENP6Q9GZR1 1112 aaPredicted RBP4.21□□□□□ -1.74
SYNE2-204ENST00000358025 CLIC5Q9NZA1 410 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 SLAIN2Q9P270 581 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 SUPT7LO94864 414 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 FBXO21O94952 628 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 BMP10O95393 424 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms