RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 TBC1D25Q3MII6 688 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 NRSN1Q8IZ57 195 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 SRBD1Q8N5C6 995 aaKnown RBP17.63■□□□□ 0.41
COL27A1-201ENST00000356083 ZNF248Q8NDW4 579 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 ADAM32Q8TC27 787 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 CEP44Q9C0F1 390 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 DBIP07108 87 aaKnown RBP17.63■□□□□ 0.41
COL27A1-201ENST00000356083 NFKB1P19838 968 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 SERPINB8P50452 374 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 NEDD8Q15843 81 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 ANKRD13AQ8IZ07 590 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 EPS8L2Q9H6S3 715 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 EFCAB1Q9HAE3 211 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 TMEM8AQ9HCN3 771 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 HEY2Q9UBP5 337 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 CBX5P45973 191 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 GTF2A2P52657 109 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 MFSD7Q6UXD7 560 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 SUSD6Q92537 303 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 DPP7Q9UHL4 492 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 PHF11Q9UIL8 331 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 POLD2P49005 469 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 ELMO3Q96BJ8 720 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 CCDC126Q96EE4 140 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 TRIM64BA6NI03 449 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 IL1BP01584 269 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 MDH1P40925 334 aaKnown RBP17.63■□□□□ 0.41
COL27A1-201ENST00000356083 FAM220AQ7Z4H9 259 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 OSMRQ99650 979 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 LYNP07948 512 aa17.62■□□□□ 0.41
COL27A1-201ENST00000356083 SUZ12Q15022 739 aaKnown RBP17.62■□□□□ 0.41
COL27A1-201ENST00000356083 METTL21CQ5VZV1 264 aa17.62■□□□□ 0.41
COL27A1-201ENST00000356083 DSN1Q9H410 356 aa17.62■□□□□ 0.41
COL27A1-201ENST00000356083 PCDHB2Q9Y5E7 798 aa17.62■□□□□ 0.41
COL27A1-201ENST00000356083 NR2E3Q9Y5X4 410 aa17.62■□□□□ 0.41
COL27A1-201ENST00000356083 A0A087WZ62 844 aa17.62■□□□□ 0.41
COL27A1-201ENST00000356083 NTRK1P04629 796 aa17.62■□□□□ 0.41
COL27A1-201ENST00000356083 TCHHL1Q5QJ38 904 aaPredicted RBP17.62■□□□□ 0.41
COL27A1-201ENST00000356083 C11orf63Q6NUN7 778 aa17.62■□□□□ 0.41
COL27A1-201ENST00000356083 ADGRG2Q8IZP9 1017 aa17.62■□□□□ 0.41
COL27A1-201ENST00000356083 NMD3Q96D46 503 aaKnown RBP17.62■□□□□ 0.41
COL27A1-201ENST00000356083 AP4S1Q9Y587 144 aa17.62■□□□□ 0.41
COL27A1-201ENST00000356083 NR3C2P08235 984 aa17.62■□□□□ 0.41
COL27A1-201ENST00000356083 SETD6Q8TBK2 473 aa17.62■□□□□ 0.41
COL27A1-201ENST00000356083 CCT8L2Q96SF2 557 aa17.62■□□□□ 0.41
COL27A1-201ENST00000356083 MAST1Q9Y2H9 1570 aa17.62■□□□□ 0.41
COL27A1-201ENST00000356083 ASCC3Q8N3C0 2202 aaKnown RBP17.62■□□□□ 0.41
COL27A1-201ENST00000356083 SCN2BO60939 215 aa17.62■□□□□ 0.41
COL27A1-201ENST00000356083 TFPIP10646 304 aa17.62■□□□□ 0.41
COL27A1-201ENST00000356083 UCHL3P15374 230 aa17.62■□□□□ 0.41
COL27A1-201ENST00000356083 H2AFXP16104 143 aaPredicted RBP17.62■□□□□ 0.41
COL27A1-201ENST00000356083 HPCAL1P37235 193 aa17.62■□□□□ 0.41
COL27A1-201ENST00000356083 IFNGR2P38484 337 aa17.62■□□□□ 0.41
COL27A1-201ENST00000356083 PTPAQ15257 358 aa17.62■□□□□ 0.41
COL27A1-201ENST00000356083 GPER1Q99527 375 aa17.62■□□□□ 0.41
COL27A1-201ENST00000356083 TMEM120AQ9BXJ8 343 aa17.62■□□□□ 0.41
COL27A1-201ENST00000356083 RBM22Q9NW64 420 aaKnown RBP eCLIP17.62■□□□□ 0.415e-7■■■□□ 16.7
COL27A1-201ENST00000356083 DCLK1O15075 740 aa17.62■□□□□ 0.41
COL27A1-201ENST00000356083 FGFR3P22607 806 aa17.62■□□□□ 0.41
COL27A1-201ENST00000356083 SLC29A2Q14542 456 aa17.62■□□□□ 0.41
COL27A1-201ENST00000356083 RABL6Q3YEC7 729 aaPredicted RBP17.62■□□□□ 0.41
COL27A1-201ENST00000356083 UBE2OQ9C0C9 1292 aaKnown RBP17.62■□□□□ 0.41
COL27A1-201ENST00000356083 TAF6LQ9Y6J9 622 aa17.62■□□□□ 0.41
COL27A1-201ENST00000356083 ZC3H7AQ8IWR0 971 aaKnown RBP17.62■□□□□ 0.41
COL27A1-201ENST00000356083 GUF1Q8N442 669 aaKnown RBP17.62■□□□□ 0.41
COL27A1-201ENST00000356083 RIBC2Q9H4K1 309 aa17.62■□□□□ 0.41
COL27A1-201ENST00000356083 H0Y858 1186 aa17.61■□□□□ 0.41
COL27A1-201ENST00000356083 TP73O15350 636 aa17.61■□□□□ 0.41
COL27A1-201ENST00000356083 SLC25A27O95847 323 aa17.61■□□□□ 0.41
COL27A1-201ENST00000356083 FDFT1P37268 417 aa17.61■□□□□ 0.41
COL27A1-201ENST00000356083 ZNHIT3Q15649 155 aaPredicted RBP17.61■□□□□ 0.41
COL27A1-201ENST00000356083 HAO1Q9UJM8 370 aa17.61■□□□□ 0.41
COL27A1-201ENST00000356083 SYNPO2Q9UMS6 1093 aa17.61■□□□□ 0.41
COL27A1-201ENST00000356083 TPH1P17752 444 aa17.61■□□□□ 0.41
COL27A1-201ENST00000356083 ATP5F1P24539 256 aaPredicted RBP17.61■□□□□ 0.41
COL27A1-201ENST00000356083 CASP9P55211 416 aa17.61■□□□□ 0.41
COL27A1-201ENST00000356083 GPATCH2LQ9NWQ4 482 aa17.61■□□□□ 0.41
COL27A1-201ENST00000356083 PSTPIP1O43586 416 aa17.61■□□□□ 0.41
COL27A1-201ENST00000356083 TFDP3Q5H9I0 405 aa17.61■□□□□ 0.41
COL27A1-201ENST00000356083 FAR1Q8WVX9 515 aa17.61■□□□□ 0.41
COL27A1-201ENST00000356083 TIPINQ9BVW5 301 aa17.61■□□□□ 0.41
COL27A1-201ENST00000356083 VANGL2Q9ULK5 521 aa17.61■□□□□ 0.41
COL27A1-201ENST00000356083 ALAS2P22557 587 aa17.61■□□□□ 0.41
COL27A1-201ENST00000356083 HOXC12P31275 282 aa17.61■□□□□ 0.41
COL27A1-201ENST00000356083 FAM172AQ8WUF8 416 aa17.61■□□□□ 0.41
COL27A1-201ENST00000356083 MRGBPQ9NV56 204 aa17.61■□□□□ 0.41
COL27A1-201ENST00000356083 RAD51BO15315 384 aa17.61■□□□□ 0.41
COL27A1-201ENST00000356083 LSP1P33241 339 aa17.61■□□□□ 0.41
COL27A1-201ENST00000356083 ISLR2Q6UXK2 745 aa17.61■□□□□ 0.41
COL27A1-201ENST00000356083 ZNF579Q8NAF0 562 aaKnown RBP17.61■□□□□ 0.41
COL27A1-201ENST00000356083 CENPIQ92674 756 aaPredicted RBP17.61■□□□□ 0.41
COL27A1-201ENST00000356083 KCNN2Q9H2S1 579 aa17.61■□□□□ 0.41
COL27A1-201ENST00000356083 FZD1Q9UP38 647 aa17.61■□□□□ 0.41
COL27A1-201ENST00000356083 MGRN1O60291 552 aa17.61■□□□□ 0.41
COL27A1-201ENST00000356083 SLC18A3Q16572 532 aa17.61■□□□□ 0.41
COL27A1-201ENST00000356083 BARGINQ6ZT62 677 aa17.61■□□□□ 0.41
COL27A1-201ENST00000356083 KCNB2Q92953 911 aa17.61■□□□□ 0.41
COL27A1-201ENST00000356083 CNPY3Q9BT09 278 aa17.61■□□□□ 0.41
COL27A1-201ENST00000356083 MPOP05164 745 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 IGFALSP35858 605 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms