RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 TSPAN3O60637 253 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 JCHAINP01591 159 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 GJB1P08034 283 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 SLC12A3P55017 1021 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 PSMD5Q16401 504 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 SYCP2LQ5T4T6 812 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 SLC24A5Q71RS6 500 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 SLC2A14Q8TDB8 520 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 HEXDCQ8WVB3 486 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 MS4A14Q96JA4 679 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 ZSCAN32Q9NX65 697 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 SIGLEC1Q9BZZ2 1709 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 TLX1P31314 330 aaPredicted RBP11.54□□□□□ -0.56
FN1-204ENST00000356005 LRRC49Q8IUZ0 686 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 MYOM1P52179 1685 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.54□□□□□ -0.56
FN1-204ENST00000356005 CACNB4O00305 520 aaPredicted RBP11.54□□□□□ -0.56
FN1-204ENST00000356005 MPOP05164 745 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 ITGAXP20702 1163 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 COILP38432 576 aaPredicted RBP11.54□□□□□ -0.56
FN1-204ENST00000356005 CDH17Q12864 832 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 TRAPPC5Q8IUR0 188 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 MTMR14Q8NCE2 650 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 SHDQ96IW2 340 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 IMPAD1Q9NX62 359 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 ENTPD4Q9Y227 616 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 SGPL1O95470 568 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 NFATC1O95644 943 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 IL1BP01584 269 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 SLC2A4P14672 509 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 CRABP2P29373 138 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 ALDH6A1Q02252 535 aaKnown RBP11.54□□□□□ -0.56
FN1-204ENST00000356005 CYLC2Q14093 348 aaPredicted RBP11.54□□□□□ -0.56
FN1-204ENST00000356005 CRY2Q49AN0 593 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 SPRYD7Q5W111 196 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 CLEC17AQ6ZS10 378 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 COLGALT2Q8IYK4 626 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 BEND7Q8N7W2 519 aaPredicted RBP11.54□□□□□ -0.56
FN1-204ENST00000356005 ZNF513Q8N8E2 541 aaPredicted RBP11.54□□□□□ -0.56
FN1-204ENST00000356005 KLRG1Q96E93 195 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 DDX20Q9UHI6 824 aaKnown RBP11.54□□□□□ -0.56
FN1-204ENST00000356005 POLG2Q9UHN1 485 aa11.54□□□□□ -0.56
FN1-204ENST00000356005 TKTP29401 623 aaKnown RBP11.53□□□□□ -0.56
FN1-204ENST00000356005 HPCAL1P37235 193 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 CCNG2Q16589 344 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 PHC3Q8NDX5 983 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 EXO5Q9H790 373 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 IL17RBQ9NRM6 502 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 NR2E1Q9Y466 385 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 MYO1GB0I1T2 1018 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 TCP11X1B4DZS4 312 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 CYTH3O43739 400 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 SLITRK3O94933 977 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 ATP6V1C1P21283 382 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 GGCXP38435 758 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 ALDH18A1P54886 795 aaKnown RBP11.53□□□□□ -0.56
FN1-204ENST00000356005 CYP51A1Q16850 503 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 C7orf61Q8IZ16 206 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 FAM161BQ96MY7 647 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 SEC31AO94979 1220 aaKnown RBP11.53□□□□□ -0.56
FN1-204ENST00000356005 KCNA10Q16322 511 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 SPANXN3Q5MJ09 141 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 PPP1R15BQ5SWA1 713 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 ZNF614Q8N883 585 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 B3GALNT2Q8NCR0 500 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 RAD21L1Q9H4I0 556 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 TK2O00142 265 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 SEPT4O43236 478 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 ATMINO43313 823 aaPredicted RBP11.53□□□□□ -0.56
FN1-204ENST00000356005 CSDE1O75534 798 aaKnown RBP11.53□□□□□ -0.56
FN1-204ENST00000356005 GNSP15586 552 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 CLCN6P51797 869 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 SLC6A3Q01959 620 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 DDX39BQ13838 428 aaKnown RBP11.53□□□□□ -0.56
FN1-204ENST00000356005 TPGS1Q6ZTW0 290 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 FICDQ9BVA6 458 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 ZDHHC6Q9H6R6 413 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 FAM105AQ9NUU6 356 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 PCDHGC5Q9Y5F6 944 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 SGTAO43765 313 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 SUPT7LO94864 414 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 CCDC130P13994 396 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 ZNF24P17028 368 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 STRA8Q7Z7C7 330 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 CXorf40BQ96DE9 158 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 OSBPL6Q9BZF3 934 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 ACTR8Q9H981 624 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 DDX4Q9NQI0 724 aaKnown RBP11.53□□□□□ -0.56
FN1-204ENST00000356005 AASDHPPTQ9NRN7 309 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 RGPD1P0DJD0 1748 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 ABCC6O95255 1503 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 FXR1P51114 621 aaKnown RBP eCLIP11.53□□□□□ -0.56
FN1-204ENST00000356005 ITGA8P53708 1063 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 NAA20P61599 178 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 ORC1Q13415 861 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 AAK1Q2M2I8 961 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 SLC13A5Q86YT5 568 aaPredicted RBP11.53□□□□□ -0.56
FN1-204ENST00000356005 POP1Q99575 1024 aaKnown RBP11.53□□□□□ -0.56
FN1-204ENST00000356005 TKTL2Q9H0I9 626 aa11.53□□□□□ -0.56
FN1-204ENST00000356005 FAM198AQ9UFP1 575 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms