RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 RPL10AP62906 217 aaKnown RBP17.77■□□□□ 0.44
VPS13B-201ENST00000355155 IFFO1Q0D2I5 559 aa17.77■□□□□ 0.44
VPS13B-201ENST00000355155 AUHQ13825 339 aaKnown RBP17.77■□□□□ 0.44
VPS13B-201ENST00000355155 LRRC26Q2I0M4 334 aa17.77■□□□□ 0.44
VPS13B-201ENST00000355155 FAM72AQ5TYM5 149 aa17.77■□□□□ 0.44
VPS13B-201ENST00000355155 FAM72DQ6L9T8 149 aa17.77■□□□□ 0.44
VPS13B-201ENST00000355155 TMEM173Q86WV6 379 aaPredicted RBP17.77■□□□□ 0.44
VPS13B-201ENST00000355155 FAM72BQ86X60 149 aa17.77■□□□□ 0.44
VPS13B-201ENST00000355155 SLC39A11Q8N1S5 342 aa17.77■□□□□ 0.44
VPS13B-201ENST00000355155 HTR3CQ8WXA8 447 aa17.77■□□□□ 0.44
VPS13B-201ENST00000355155 SPATA13Q96N96 652 aa17.77■□□□□ 0.44
VPS13B-201ENST00000355155 C10orf88Q9H8K7 445 aa17.77■□□□□ 0.44
VPS13B-201ENST00000355155 SLC12A6Q9UHW9 1150 aa17.77■□□□□ 0.44
VPS13B-201ENST00000355155 HEY1Q9Y5J3 304 aa17.77■□□□□ 0.44
VPS13B-201ENST00000355155 FGF10O15520 208 aaPredicted RBP17.77■□□□□ 0.44
VPS13B-201ENST00000355155 MTSS1O43312 755 aa17.77■□□□□ 0.44
VPS13B-201ENST00000355155 OPHN1O60890 802 aa17.77■□□□□ 0.44
VPS13B-201ENST00000355155 ERCC2P18074 760 aa17.77■□□□□ 0.44
VPS13B-201ENST00000355155 ZNF683Q8IZ20 524 aa17.77■□□□□ 0.44
VPS13B-201ENST00000355155 EDEM1Q92611 657 aa17.77■□□□□ 0.44
VPS13B-201ENST00000355155 RETREG1Q9H6L5 497 aa17.77■□□□□ 0.44
VPS13B-201ENST00000355155 TMPRSS4Q9NRS4 437 aa17.77■□□□□ 0.44
VPS13B-201ENST00000355155 OSER1Q9NX31 292 aa17.77■□□□□ 0.44
VPS13B-201ENST00000355155 IGSF9Q9P2J2 1179 aa17.77■□□□□ 0.44
VPS13B-201ENST00000355155 ACTL7BQ9Y614 415 aa17.77■□□□□ 0.44
VPS13B-201ENST00000355155 A0A1W2PQH9 124 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 E7EVH7 732 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 RASGRF2O14827 1237 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 IVLP07476 585 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 SLC2A3P11169 496 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 MLNP12872 115 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 CCR1P32246 355 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 TPI1P60174 286 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 KYNUQ16719 465 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 CASP10Q92851 521 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 CENPTQ96BT3 561 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 TSGA13Q96PP4 275 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 WDR83Q9BRX9 315 aaKnown RBP17.76■□□□□ 0.43
VPS13B-201ENST00000355155 DHRS4Q9BTZ2 278 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 HCSTQ9UBK5 93 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 SPAG6O75602 509 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 ABLIM3O94929 683 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 SOD2P04179 222 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 IBSPP21815 317 aaPredicted RBP17.76■□□□□ 0.43
VPS13B-201ENST00000355155 DSG1Q02413 1049 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 TPGS2Q68CL5 300 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 RNF19BQ6ZMZ0 732 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 TAS1R1Q7RTX1 841 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 LZTR1Q8N653 840 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 PWWP2AQ96N64 755 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 CNOT10Q9H9A5 744 aaKnown RBP17.76■□□□□ 0.43
VPS13B-201ENST00000355155 SAYSD1Q9NPB0 183 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 PPARGC1AQ9UBK2 798 aaKnown RBP17.76■□□□□ 0.43
VPS13B-201ENST00000355155 TEX264Q9Y6I9 313 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 TCRBV7S3A2A0A539 114 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 SERPINB6P35237 376 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 ACTN2P35609 894 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 PGFP49763 221 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 RING1Q06587 406 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 FNBP1LQ5T0N5 605 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 CCDC25Q86WR0 208 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 FCRL2Q96LA5 508 aaPredicted RBP17.76■□□□□ 0.43
VPS13B-201ENST00000355155 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.76■□□□□ 0.43
VPS13B-201ENST00000355155 OR12D3Q9UGF7 316 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 XPO7Q9UIA9 1087 aaKnown RBP17.76■□□□□ 0.43
VPS13B-201ENST00000355155 MFHAS1Q9Y4C4 1052 aa17.76■□□□□ 0.43
VPS13B-201ENST00000355155 CACNG3O60359 315 aa17.75■□□□□ 0.43
VPS13B-201ENST00000355155 MX2P20592 715 aa17.75■□□□□ 0.43
VPS13B-201ENST00000355155 YWHAQP27348 245 aa17.75■□□□□ 0.43
VPS13B-201ENST00000355155 MMP13P45452 471 aa17.75■□□□□ 0.43
VPS13B-201ENST00000355155 GYS2P54840 703 aa17.75■□□□□ 0.43
VPS13B-201ENST00000355155 HEATR6Q6AI08 1181 aaKnown RBP17.75■□□□□ 0.43
VPS13B-201ENST00000355155 DENND5BQ6ZUT9 1274 aa17.75■□□□□ 0.43
VPS13B-201ENST00000355155 UBE2Q1Q7Z7E8 422 aa17.75■□□□□ 0.43
VPS13B-201ENST00000355155 FBXO22Q8NEZ5 403 aa17.75■□□□□ 0.43
VPS13B-201ENST00000355155 CDK5RAP1Q96SZ6 601 aaKnown RBP17.75■□□□□ 0.43
VPS13B-201ENST00000355155 SLC24A2Q9UI40 661 aa17.75■□□□□ 0.43
VPS13B-201ENST00000355155 CLUHO75153 1309 aa17.75■□□□□ 0.43
VPS13B-201ENST00000355155 FAM155BO75949 473 aa17.75■□□□□ 0.43
VPS13B-201ENST00000355155 LRIG2O94898 1065 aa17.75■□□□□ 0.43
VPS13B-201ENST00000355155 ATP5DP30049 168 aa17.75■□□□□ 0.43
VPS13B-201ENST00000355155 ALDH7A1P49419 539 aaKnown RBP17.75■□□□□ 0.43
VPS13B-201ENST00000355155 USP46P62068 366 aa17.75■□□□□ 0.43
VPS13B-201ENST00000355155 PPP2R2AP63151 447 aa17.75■□□□□ 0.43
VPS13B-201ENST00000355155 WASHC5Q12768 1159 aa17.75■□□□□ 0.43
VPS13B-201ENST00000355155 TRIP4Q15650 581 aaPredicted RBP17.75■□□□□ 0.43
VPS13B-201ENST00000355155 CCDC38Q502W7 563 aa17.75■□□□□ 0.43
VPS13B-201ENST00000355155 CYS1Q717R9 158 aa17.75■□□□□ 0.43
VPS13B-201ENST00000355155 LRRC49Q8IUZ0 686 aa17.75■□□□□ 0.43
VPS13B-201ENST00000355155 SCN4BQ8IWT1 228 aa17.75■□□□□ 0.43
VPS13B-201ENST00000355155 ADAM32Q8TC27 787 aa17.75■□□□□ 0.43
VPS13B-201ENST00000355155 VAT1Q99536 393 aa17.75■□□□□ 0.43
VPS13B-201ENST00000355155 CCDC77Q9BR77 488 aa17.75■□□□□ 0.43
VPS13B-201ENST00000355155 CRISPLD1Q9H336 500 aa17.75■□□□□ 0.43
VPS13B-201ENST00000355155 AFF4Q9UHB7 1163 aaKnown RBP17.75■□□□□ 0.43
VPS13B-201ENST00000355155 ATP11BQ9Y2G3 1177 aa17.75■□□□□ 0.43
VPS13B-201ENST00000355155 IGLV3-10A0A075B6K4 115 aa17.74■□□□□ 0.43
VPS13B-201ENST00000355155 TRIM43BA6NCK2 446 aa17.74■□□□□ 0.43
VPS13B-201ENST00000355155 LAG3P18627 525 aa17.74■□□□□ 0.43
VPS13B-201ENST00000355155 GPR15P49685 360 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms