RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 SLCO1B7G3V0H7 640 aa13.52□□□□□ -0.25
SCN8A-202ENST00000355133 GRK2P25098 689 aa13.52□□□□□ -0.25
SCN8A-202ENST00000355133 FNDC3BQ53EP0 1204 aaKnown RBP13.52□□□□□ -0.25
SCN8A-202ENST00000355133 DPY30Q9C005 99 aa13.52□□□□□ -0.25
SCN8A-202ENST00000355133 COPG1Q9Y678 874 aaKnown RBP13.52□□□□□ -0.25
SCN8A-202ENST00000355133 NFASCO94856 1347 aa13.52□□□□□ -0.25
SCN8A-202ENST00000355133 WBP4O75554 376 aaKnown RBP13.52□□□□□ -0.25
SCN8A-202ENST00000355133 VAPBO95292 243 aa13.52□□□□□ -0.25
SCN8A-202ENST00000355133 IFNA14P01570 189 aa13.52□□□□□ -0.25
SCN8A-202ENST00000355133 USP39Q53GS9 565 aaKnown RBP13.52□□□□□ -0.25
SCN8A-202ENST00000355133 ZNF470Q6ECI4 717 aa13.52□□□□□ -0.25
SCN8A-202ENST00000355133 WDR93Q6P2C0 686 aa13.52□□□□□ -0.25
SCN8A-202ENST00000355133 TPGS1Q6ZTW0 290 aa13.52□□□□□ -0.25
SCN8A-202ENST00000355133 ZNF410Q86VK4 478 aa13.52□□□□□ -0.25
SCN8A-202ENST00000355133 ZDHHC17Q8IUH5 632 aa13.52□□□□□ -0.25
SCN8A-202ENST00000355133 DMGDHQ9UI17 866 aaKnown RBP13.52□□□□□ -0.25
SCN8A-202ENST00000355133 ADAMTS13Q76LX8 1427 aa13.52□□□□□ -0.25
SCN8A-202ENST00000355133 TM9SF1O15321 606 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 SLC1A6P48664 564 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 CCT8P50990 548 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 TMEM119Q4V9L6 283 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 GRTP1Q5TC63 336 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 RINLQ6ZS11 566 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 RIPOR1Q6ZS17 1223 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 ATG16L2Q8NAA4 619 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 ANKRD49Q8WVL7 239 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 SOCS4Q8WXH5 440 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 FIG4Q92562 907 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 MTMR8Q96EF0 704 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 ADAM2Q99965 735 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 TKTL2Q9H0I9 626 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 GANQ9H2C0 597 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 SPG21Q9NZD8 308 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 ZMYM5Q9UJ78 669 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 TISP43B9A030 160 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 SH3BGRLO75368 114 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 PGAM1P18669 254 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 AXLP30530 894 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 OAZ1P54368 228 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 SLC6A3Q01959 620 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 BRSK2Q8IWQ3 736 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 FBXO39Q8N4B4 442 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 TRPC4APQ8TEL6 797 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 ROGDIQ9GZN7 287 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 ELOVL4Q9GZR5 314 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 RRN3Q9NYV6 651 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 AGRPO00253 132 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 RTN3O95197 1032 aaPredicted RBP13.51□□□□□ -0.25
SCN8A-202ENST00000355133 IGSF6O95976 241 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 KRT6AP02538 564 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 KRT6BP04259 564 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 ZNF7P17097 686 aaPredicted RBP13.51□□□□□ -0.25
SCN8A-202ENST00000355133 KRT6CP48668 564 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 MFSD7Q6UXD7 560 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 GLMNQ92990 594 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 APBA2Q99767 749 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 CD248Q9HCU0 757 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 POLG2Q9UHN1 485 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 PSMC3P17980 439 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 CALB2P22676 271 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 PTENP60484 403 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 APOBEC3HQ6NTF7 200 aaKnown RBP13.51□□□□□ -0.25
SCN8A-202ENST00000355133 PALB2Q86YC2 1186 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 MTERF3Q96E29 417 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 GAD1Q99259 594 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 TBCBQ99426 244 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 C10orf88Q9H8K7 445 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 HMX1Q9NP08 348 aaPredicted RBP13.51□□□□□ -0.25
SCN8A-202ENST00000355133 NDOR1Q9UHB4 597 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 E5RJQ4 531 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 RAD51BO15315 384 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 LGALS2P05162 132 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 FMO4P31512 558 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 GPC2Q8N158 579 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 FUT8Q9BYC5 575 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 RNF208Q9H0X6 261 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 MID1IP1Q9NPA3 183 aa13.51□□□□□ -0.25
SCN8A-202ENST00000355133 A1CFQ9NQ94 594 aaKnown RBP13.51□□□□□ -0.25
SCN8A-202ENST00000355133 KPNA3O00505 521 aaPredicted RBP13.5□□□□□ -0.25
SCN8A-202ENST00000355133 CYB5D1Q6P9G0 228 aa13.5□□□□□ -0.25
SCN8A-202ENST00000355133 GPR141Q7Z602 305 aa13.5□□□□□ -0.25
SCN8A-202ENST00000355133 SEPHS2Q99611 448 aa13.5□□□□□ -0.25
SCN8A-202ENST00000355133 SH3GL1Q99961 368 aa13.5□□□□□ -0.25
SCN8A-202ENST00000355133 MRPL9Q9BYD2 267 aaKnown RBP13.5□□□□□ -0.25
SCN8A-202ENST00000355133 BATF3Q9NR55 127 aa13.5□□□□□ -0.25
SCN8A-202ENST00000355133 SEPT3Q9UH03 358 aa13.5□□□□□ -0.25
SCN8A-202ENST00000355133 MROH7Q68CQ1 1323 aa13.5□□□□□ -0.25
SCN8A-202ENST00000355133 TMEM114B3SHH9 223 aa13.5□□□□□ -0.25
SCN8A-202ENST00000355133 RIPK2O43353 540 aa13.5□□□□□ -0.25
SCN8A-202ENST00000355133 HSMCR30P0CW71 290 aa13.5□□□□□ -0.25
SCN8A-202ENST00000355133 BCL2L1Q07817 233 aa13.5□□□□□ -0.25
SCN8A-202ENST00000355133 CRYMQ14894 314 aa13.5□□□□□ -0.25
SCN8A-202ENST00000355133 FNDC5Q8NAU1 212 aa13.5□□□□□ -0.25
SCN8A-202ENST00000355133 NCOA3Q9Y6Q9 1424 aa13.5□□□□□ -0.25
SCN8A-202ENST00000355133 SAC3D1A6NKF1 404 aa13.5□□□□□ -0.25
SCN8A-202ENST00000355133 DNALI1O14645 258 aaPredicted RBP13.5□□□□□ -0.25
SCN8A-202ENST00000355133 XYLBO75191 536 aa13.5□□□□□ -0.25
SCN8A-202ENST00000355133 RECQL4O94761 1208 aa13.5□□□□□ -0.25
SCN8A-202ENST00000355133 OR56A5P0C7T3 313 aa13.5□□□□□ -0.25
SCN8A-202ENST00000355133 ACADSP16219 412 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms