RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 NEDD8Q15843 81 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 TCHHL1Q5QJ38 904 aaPredicted RBP5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 XRRA1Q6P2D8 792 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 DOK6Q6PKX4 331 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 FAM131BQ86XD5 332 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 MKNK1Q9BUB5 465 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 FBXO44Q9H4M3 255 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 TAGLN3Q9UI15 199 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 MICAL3Q7RTP6 2002 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 GUCY1B2O75343 617 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 STARP49675 285 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 XRCC4Q13426 336 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 SMYD1Q8NB12 490 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 SETD9Q8NE22 299 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 UBP1Q9NZI7 540 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 SUCOQ9UBS9 1254 aaKnown RBP5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 CHKBQ9Y259 395 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 SHANK2Q9UPX8 1470 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 PTGES3LE9PB15 166 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 BTN3A3O00478 584 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 OR1E1P30953 314 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 STAT5AP42229 794 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 ATN1P54259 1190 aaPredicted RBP5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 MTAPQ13126 283 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 PTPAQ15257 358 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 COLGALT1Q8NBJ5 622 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 TMEM138Q9NPI0 162 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 TPRKBQ9Y3C4 175 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 KPNA5O15131 536 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 MT-CO1P00395 513 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 SERPINF2P08697 491 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 NR1I3Q14994 352 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 TMEM120AQ9BXJ8 343 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 PTPRHQ9HD43 1115 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 AGPAT3Q9NRZ7 376 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 PNPLA7Q6ZV29 1317 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 TFAP2DQ7Z6R9 452 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 DEFB128Q7Z7B8 93 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 CD302Q8IX05 232 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 LRRC34Q8IZ02 419 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 SEMA4DQ92854 862 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 CLIP3Q96DZ5 547 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 FAM84BQ96KN1 310 aaPredicted RBP5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 QKIQ96PU8 341 aaKnown RBP eCLIP5.91□□□□□ -1.462e-9■■■■■ 52.7
SRGAP1-201ENST00000355086 CGRRF1Q99675 332 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 DEFB129Q9H1M3 183 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 TNFSF13BQ9Y275 285 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 CD3EAPO15446 510 aaKnown RBP5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 IDH3BO43837 385 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 MPOP05164 745 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 MPZL3Q6UWV2 235 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 MFSD7Q6UXD7 560 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 MCOLN3Q8TDD5 553 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 ZNF70Q9UC06 446 aaPredicted RBP5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 CRYL1Q9Y2S2 319 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 HSD17B3P37058 310 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 RBM22Q9NW64 420 aaKnown RBP eCLIP5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 SKIV2L2P42285 1042 aaKnown RBP5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 METTL16Q86W50 562 aaKnown RBP5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 ELOA2Q8IYF1 753 aaPredicted RBP5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 MYOZ2Q9NPC6 264 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 RAB23Q9ULC3 237 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 KIF1BO60333 1816 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 SGPL1O95470 568 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 CPA3P15088 417 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 TLX1P31314 330 aaPredicted RBP5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 ZNHIT3Q15649 155 aaPredicted RBP5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 USP45Q70EL2 814 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 COL26A1Q96A83 441 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 SPG21Q9NZD8 308 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 CROTQ9UKG9 612 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 IFNA16P05015 189 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 NTSP30990 170 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 USP38Q8NB14 1042 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 ERLEC1Q96DZ1 483 aa5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 UNKQ9C0B0 810 aaKnown RBP5.91□□□□□ -1.46
SRGAP1-201ENST00000355086 LOC100506127A0A0U1RQW1 187 aa5.9□□□□□ -1.46
SRGAP1-201ENST00000355086 PHGDHO43175 533 aaKnown RBP5.9□□□□□ -1.46
SRGAP1-201ENST00000355086 PRODHO43272 600 aa5.9□□□□□ -1.46
SRGAP1-201ENST00000355086 FBXO21O94952 628 aa5.9□□□□□ -1.46
SRGAP1-201ENST00000355086 CLUP10909 449 aa5.9□□□□□ -1.46
SRGAP1-201ENST00000355086 RAP1GAPP47736 663 aa5.9□□□□□ -1.46
SRGAP1-201ENST00000355086 NEK5Q6P3R8 708 aa5.9□□□□□ -1.46
SRGAP1-201ENST00000355086 SGMS1Q86VZ5 419 aa5.9□□□□□ -1.46
SRGAP1-201ENST00000355086 TRPV3Q8NET8 790 aa5.9□□□□□ -1.46
SRGAP1-201ENST00000355086 THAP2Q9H0W7 228 aa5.9□□□□□ -1.46
SRGAP1-201ENST00000355086 ULK2Q8IYT8 1036 aa5.9□□□□□ -1.46
SRGAP1-201ENST00000355086 LPCAT1Q8NF37 534 aa5.9□□□□□ -1.46
SRGAP1-201ENST00000355086 RHOBTB2Q9BYZ6 727 aa5.9□□□□□ -1.46
SRGAP1-201ENST00000355086 CRABP2P29373 138 aa5.9□□□□□ -1.46
SRGAP1-201ENST00000355086 NFIAQ12857 509 aa5.9□□□□□ -1.46
SRGAP1-201ENST00000355086 ILDR2Q71H61 639 aa5.9□□□□□ -1.46
SRGAP1-201ENST00000355086 CACUL1Q86Y37 369 aa5.9□□□□□ -1.46
SRGAP1-201ENST00000355086 NMD3Q96D46 503 aaKnown RBP5.9□□□□□ -1.46
SRGAP1-201ENST00000355086 PHF20Q9BVI0 1012 aa5.9□□□□□ -1.46
SRGAP1-201ENST00000355086 CYLDQ9NQC7 956 aa5.9□□□□□ -1.46
SRGAP1-201ENST00000355086 SLC1A6P48664 564 aa5.9□□□□□ -1.46
SRGAP1-201ENST00000355086 FASTKQ14296 549 aaKnown RBP5.9□□□□□ -1.46
SRGAP1-201ENST00000355086 TIMM50Q3ZCQ8 353 aa5.9□□□□□ -1.46
SRGAP1-201ENST00000355086 ZNF655Q8N720 491 aaPredicted RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms